RNA–Protein interactions for RNA: ENST00000404914.7

ATG4B-205, Transcript of autophagy related 4B cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4B, Length 2,878 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-205ENST00000404914 PTPDC1A2A3K4 754 aa18.13■□□□□ 0.49
ATG4B-205ENST00000404914 ME1P48163 572 aa18.13■□□□□ 0.49
ATG4B-205ENST00000404914 FAM160A1Q05DH4 1040 aa18.13■□□□□ 0.49
ATG4B-205ENST00000404914 PTPN21Q16825 1174 aa18.13■□□□□ 0.49
ATG4B-205ENST00000404914 FMNL2Q96PY5 1086 aa18.13■□□□□ 0.49
ATG4B-205ENST00000404914 IFNKQ9P0W0 207 aa18.13■□□□□ 0.49
ATG4B-205ENST00000404914 PLA2G4AP47712 749 aa18.13■□□□□ 0.49
ATG4B-205ENST00000404914 OSBPL5Q9H0X9 879 aaPredicted RBP18.13■□□□□ 0.49
ATG4B-205ENST00000404914 DBNLQ9UJU6 430 aaKnown RBP18.13■□□□□ 0.49
ATG4B-205ENST00000404914 CCDC9Q9Y3X0 531 aaKnown RBP18.13■□□□□ 0.49
ATG4B-205ENST00000404914 BIN1O00499 593 aa18.13■□□□□ 0.49
ATG4B-205ENST00000404914 CTAGE5O15320 804 aa18.13■□□□□ 0.49
ATG4B-205ENST00000404914 HOXB7P09629 217 aa18.13■□□□□ 0.49
ATG4B-205ENST00000404914 TEFQ10587 303 aa18.13■□□□□ 0.49
ATG4B-205ENST00000404914 CEP57L1Q8IYX8 460 aa18.13■□□□□ 0.49
ATG4B-205ENST00000404914 ABTB2Q8N961 1025 aa18.13■□□□□ 0.49
ATG4B-205ENST00000404914 LRRC59Q96AG4 307 aaKnown RBP18.13■□□□□ 0.49
ATG4B-205ENST00000404914 KCND1Q9NSA2 647 aa18.13■□□□□ 0.49
ATG4B-205ENST00000404914 NEDD4P46934 1319 aa18.12■□□□□ 0.49
ATG4B-205ENST00000404914 OTUD7BQ6GQQ9 843 aa18.12■□□□□ 0.49
ATG4B-205ENST00000404914 CHST3Q7LGC8 479 aa18.12■□□□□ 0.49
ATG4B-205ENST00000404914 EPC1Q9H2F5 836 aa18.12■□□□□ 0.49
ATG4B-205ENST00000404914 PCDHA7Q9UN72 937 aa18.12■□□□□ 0.49
ATG4B-205ENST00000404914 RGPD2P0DJD1 1756 aa18.12■□□□□ 0.49
ATG4B-205ENST00000404914 SMC2O95347 1197 aa18.12■□□□□ 0.49
ATG4B-205ENST00000404914 IGKV5-2P06315 115 aa18.12■□□□□ 0.49
ATG4B-205ENST00000404914 CAPN2P17655 700 aa18.12■□□□□ 0.49
ATG4B-205ENST00000404914 PSME1Q06323 249 aa18.12■□□□□ 0.49
ATG4B-205ENST00000404914 FMR1NBQ8N0W7 255 aaPredicted RBP18.12■□□□□ 0.49
ATG4B-205ENST00000404914 DNAJC2Q99543 621 aaKnown RBP18.12■□□□□ 0.49
ATG4B-205ENST00000404914 PNMA6AP0CW24 399 aaPredicted RBP18.11■□□□□ 0.49
ATG4B-205ENST00000404914 NDUFA8P51970 172 aa18.11■□□□□ 0.49
ATG4B-205ENST00000404914 ARHGAP29Q52LW3 1261 aa18.11■□□□□ 0.49
ATG4B-205ENST00000404914 NOL10Q9BSC4 688 aaKnown RBP18.11■□□□□ 0.49
ATG4B-205ENST00000404914 PFKFB2O60825 505 aa18.11■□□□□ 0.49
ATG4B-205ENST00000404914 KIF1AQ12756 1690 aa18.1■□□□□ 0.49
ATG4B-205ENST00000404914 GOLGA8FQ08AF8 430 aa18.1■□□□□ 0.49
ATG4B-205ENST00000404914 GOLGA8DPQ0D2H9 430 aa18.1■□□□□ 0.49
ATG4B-205ENST00000404914 ISM2Q6H9L7 571 aa18.1■□□□□ 0.49
ATG4B-205ENST00000404914 DDX46Q7L014 1031 aaKnown RBP18.1■□□□□ 0.49
ATG4B-205ENST00000404914 NAP1L2Q9ULW6 460 aaPredicted RBP18.1■□□□□ 0.49
ATG4B-205ENST00000404914 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.1■□□□□ 0.491e-6■■□□□ 12.3
ATG4B-205ENST00000404914 SEC31AO94979 1220 aaKnown RBP18.1■□□□□ 0.49
ATG4B-205ENST00000404914 ZNF530Q6P9A1 599 aaPredicted RBP18.1■□□□□ 0.49
ATG4B-205ENST00000404914 CCDC66A2RUB6 948 aa18.09■□□□□ 0.49
ATG4B-205ENST00000404914 KRT32Q14532 448 aa18.09■□□□□ 0.49
ATG4B-205ENST00000404914 NAA16Q6N069 864 aaPredicted RBP18.09■□□□□ 0.49
ATG4B-205ENST00000404914 LINS1Q8NG48 757 aa18.09■□□□□ 0.49
ATG4B-205ENST00000404914 TIGD1Q96MW7 591 aa18.09■□□□□ 0.49
ATG4B-205ENST00000404914 TRPM3Q9HCF6 1732 aaPredicted RBP18.09■□□□□ 0.49
ATG4B-205ENST00000404914 PXDNQ92626 1479 aa18.09■□□□□ 0.49
ATG4B-205ENST00000404914 CYP2C19P33261 490 aa18.09■□□□□ 0.49
ATG4B-205ENST00000404914 SDF4Q9BRK5 362 aa18.09■□□□□ 0.49
ATG4B-205ENST00000404914 GJB4Q9NTQ9 266 aa18.09■□□□□ 0.49
ATG4B-205ENST00000404914 GSDMDP57764 484 aa18.09■□□□□ 0.49
ATG4B-205ENST00000404914 GPHNQ9NQX3 736 aaPredicted RBP18.09■□□□□ 0.49
ATG4B-205ENST00000404914 ROBO1Q9Y6N7 1651 aa18.08■□□□□ 0.49
ATG4B-205ENST00000404914 ATP1A3P13637 1013 aa18.08■□□□□ 0.48
ATG4B-205ENST00000404914 HNRNPH2P55795 449 aaKnown RBP18.08■□□□□ 0.48
ATG4B-205ENST00000404914 TFCP2Q12800 502 aa18.08■□□□□ 0.48
ATG4B-205ENST00000404914 BMS1Q14692 1282 aaKnown RBP18.08■□□□□ 0.48
ATG4B-205ENST00000404914 KRT28Q7Z3Y7 464 aa18.08■□□□□ 0.48
ATG4B-205ENST00000404914 UTYO14607 1347 aa18.08■□□□□ 0.48
ATG4B-205ENST00000404914 NCAPHQ15003 741 aa18.08■□□□□ 0.48
ATG4B-205ENST00000404914 DBNDD2Q9BQY9 259 aa18.08■□□□□ 0.48
ATG4B-205ENST00000404914 DNAI1Q9UI46 699 aa18.08■□□□□ 0.48
ATG4B-205ENST00000404914 CLIC4Q9Y696 253 aa18.08■□□□□ 0.48
ATG4B-205ENST00000404914 FDPSP14324 419 aaKnown RBP18.07■□□□□ 0.48
ATG4B-205ENST00000404914 ABCC6O95255 1503 aa18.07■□□□□ 0.48
ATG4B-205ENST00000404914 LTN1O94822 1766 aa18.07■□□□□ 0.48
ATG4B-205ENST00000404914 SALL1Q9NSC2 1324 aa18.07■□□□□ 0.48
ATG4B-205ENST00000404914 POLR3GO15318 223 aaPredicted RBP18.07■□□□□ 0.48
ATG4B-205ENST00000404914 ZRANB2O95218 330 aaKnown RBP eCLIP18.07■□□□□ 0.48
ATG4B-205ENST00000404914 LMOD1P29536 600 aaPredicted RBP18.07■□□□□ 0.48
ATG4B-205ENST00000404914 MRPS27Q92552 414 aaKnown RBP18.07■□□□□ 0.48
ATG4B-205ENST00000404914 DPF2Q92785 391 aa18.07■□□□□ 0.48
ATG4B-205ENST00000404914 SFPQP23246 707 aaKnown RBP eCLIP18.06■□□□□ 0.48
ATG4B-205ENST00000404914 PIP4K2BP78356 416 aa18.06■□□□□ 0.48
ATG4B-205ENST00000404914 NEK11Q8NG66 645 aa18.06■□□□□ 0.48
ATG4B-205ENST00000404914 ZKSCAN7Q9P0L1 754 aaPredicted RBP18.06■□□□□ 0.48
ATG4B-205ENST00000404914 KIAA1468Q9P260 1216 aa18.06■□□□□ 0.48
ATG4B-205ENST00000404914 U3KPZ7 1027 aaPredicted RBP18.06■□□□□ 0.48
ATG4B-205ENST00000404914 POLR3DP05423 398 aaPredicted RBP18.06■□□□□ 0.48
ATG4B-205ENST00000404914 PDIA6Q15084 440 aa18.06■□□□□ 0.48
ATG4B-205ENST00000404914 HSD3B7Q9H2F3 369 aa18.06■□□□□ 0.48
ATG4B-205ENST00000404914 ZCCHC17Q9NP64 241 aaKnown RBP18.06■□□□□ 0.48
ATG4B-205ENST00000404914 ORC3Q9UBD5 711 aaPredicted RBP18.06■□□□□ 0.48
ATG4B-205ENST00000404914 KIF2AO00139 706 aaPredicted RBP18.05■□□□□ 0.48
ATG4B-205ENST00000404914 ATP5JP18859 108 aa18.05■□□□□ 0.48
ATG4B-205ENST00000404914 TNNI3KQ59H18 835 aa18.05■□□□□ 0.48
ATG4B-205ENST00000404914 TRIM65Q6PJ69 517 aa18.05■□□□□ 0.48
ATG4B-205ENST00000404914 LLPHQ9BRT6 129 aaKnown RBP18.05■□□□□ 0.48
ATG4B-205ENST00000404914 IMPACTQ9P2X3 320 aa18.05■□□□□ 0.48
ATG4B-205ENST00000404914 FPGT-TNNI3KV9GXZ4 949 aa18.05■□□□□ 0.48
ATG4B-205ENST00000404914 NCAPD2Q15021 1401 aa18.05■□□□□ 0.48
ATG4B-205ENST00000404914 PSDA5PKW4 1024 aaPredicted RBP18.05■□□□□ 0.48
ATG4B-205ENST00000404914 RNMTO43148 476 aaKnown RBP18.05■□□□□ 0.48
ATG4B-205ENST00000404914 LMOD2Q6P5Q4 547 aa18.05■□□□□ 0.48
ATG4B-205ENST00000404914 DHX32Q7L7V1 743 aaKnown RBP18.05■□□□□ 0.48
ATG4B-205ENST00000404914 HOMER1Q86YM7 354 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms