RNA–Protein interactions for RNA: ENST00000404694.3

CGREF1-205, Transcript of cell growth regulator with EF-hand domain 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CGREF1, Length 1,376 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1-205ENST00000404694 ARHGAP45Q92619 1136 aa20.67■□□□□ 0.9
CGREF1-205ENST00000404694 CNNM1Q9NRU3 951 aa20.67■□□□□ 0.9
CGREF1-205ENST00000404694 H7C1D1 291 aa20.66■□□□□ 0.9
CGREF1-205ENST00000404694 SNAP23O00161 211 aa20.66■□□□□ 0.9
CGREF1-205ENST00000404694 BCAR3O75815 825 aa20.66■□□□□ 0.9
CGREF1-205ENST00000404694 COA1Q9GZY4 146 aa20.65■□□□□ 0.9
CGREF1-205ENST00000404694 IRS2Q9Y4H2 1338 aa20.65■□□□□ 0.9
CGREF1-205ENST00000404694 PCNTO95613 3336 aa20.64■□□□□ 0.9
CGREF1-205ENST00000404694 USP17L3A6NCW0 530 aa20.64■□□□□ 0.89
CGREF1-205ENST00000404694 USP17L4A6NCW7 530 aa20.64■□□□□ 0.89
CGREF1-205ENST00000404694 HIRAP54198 1017 aaPredicted RBP20.64■□□□□ 0.89
CGREF1-205ENST00000404694 RSBN1LQ6PCB5 846 aaPredicted RBP20.64■□□□□ 0.89
CGREF1-205ENST00000404694 USP17L1Q7RTZ2 530 aa20.64■□□□□ 0.89
CGREF1-205ENST00000404694 KLRG1Q96E93 195 aa20.64■□□□□ 0.89
CGREF1-205ENST00000404694 PUS3Q9BZE2 481 aaKnown RBP20.64■□□□□ 0.89
CGREF1-205ENST00000404694 UBTFL1P0CB47 393 aaPredicted RBP20.63■□□□□ 0.89
CGREF1-205ENST00000404694 MS4A1P11836 297 aa20.63■□□□□ 0.89
CGREF1-205ENST00000404694 SAMD7Q7Z3H4 446 aa20.63■□□□□ 0.89
CGREF1-205ENST00000404694 CREBZFQ9NS37 354 aa20.63■□□□□ 0.89
CGREF1-205ENST00000404694 IPO8O15397 1037 aaKnown RBP20.62■□□□□ 0.89
CGREF1-205ENST00000404694 PLIN1O60240 522 aa20.62■□□□□ 0.89
CGREF1-205ENST00000404694 TRIM27P14373 513 aa20.62■□□□□ 0.89
CGREF1-205ENST00000404694 INTS3Q68E01 1043 aaKnown RBP20.62■□□□□ 0.89
CGREF1-205ENST00000404694 C15orf52Q6ZUT6 534 aaKnown RBP20.62■□□□□ 0.89
CGREF1-205ENST00000404694 AGBL3Q8NEM8 1001 aa20.62■□□□□ 0.89
CGREF1-205ENST00000404694 FRAT1Q92837 279 aaPredicted RBP20.62■□□□□ 0.89
CGREF1-205ENST00000404694 PGAP2Q9UHJ9 254 aa20.62■□□□□ 0.89
CGREF1-205ENST00000404694 EGFRP00533 1210 aa20.61■□□□□ 0.89
CGREF1-205ENST00000404694 PDE3AQ14432 1141 aa20.61■□□□□ 0.89
CGREF1-205ENST00000404694 TBC1D10BQ4KMP7 808 aaPredicted RBP20.61■□□□□ 0.89
CGREF1-205ENST00000404694 ATF7IPQ6VMQ6 1270 aa20.61■□□□□ 0.89
CGREF1-205ENST00000404694 ZC3H15Q8WU90 426 aaKnown RBP20.61■□□□□ 0.89
CGREF1-205ENST00000404694 GMLQ99445 158 aa20.61■□□□□ 0.89
CGREF1-205ENST00000404694 TNNQ9UQP3 1299 aa20.61■□□□□ 0.89
CGREF1-205ENST00000404694 RIPOR2Q9Y4F9 1068 aa20.61■□□□□ 0.89
CGREF1-205ENST00000404694 TRPM7Q96QT4 1865 aa20.61■□□□□ 0.89
CGREF1-205ENST00000404694 DACT2Q5SW24 774 aa20.6■□□□□ 0.89
CGREF1-205ENST00000404694 STRIP1Q5VSL9 837 aa20.6■□□□□ 0.89
CGREF1-205ENST00000404694 MEIS3Q99687 375 aa20.6■□□□□ 0.89
CGREF1-205ENST00000404694 TMEM88BA6NKF7 163 aa20.59■□□□□ 0.89
CGREF1-205ENST00000404694 FMR1Q06787 632 aaKnown RBP eCLIP20.59■□□□□ 0.89
CGREF1-205ENST00000404694 LRRC24Q50LG9 513 aa20.59■□□□□ 0.89
CGREF1-205ENST00000404694 KLHDC4Q8TBB5 520 aa20.59■□□□□ 0.89
CGREF1-205ENST00000404694 FBXW7Q969H0 707 aa20.59■□□□□ 0.89
CGREF1-205ENST00000404694 CD209Q9NNX6 404 aa20.59■□□□□ 0.89
CGREF1-205ENST00000404694 MROH5Q6ZUA9 1318 aa20.59■□□□□ 0.89
CGREF1-205ENST00000404694 TRAF5O00463 557 aa20.59■□□□□ 0.89
CGREF1-205ENST00000404694 RFX5P48382 616 aaPredicted RBP20.59■□□□□ 0.89
CGREF1-205ENST00000404694 ZNF280AP59817 542 aaPredicted RBP20.59■□□□□ 0.89
CGREF1-205ENST00000404694 KIF4BQ2VIQ3 1234 aa20.59■□□□□ 0.89
CGREF1-205ENST00000404694 ZKSCAN2Q63HK3 967 aa20.59■□□□□ 0.89
CGREF1-205ENST00000404694 ZNF804AQ7Z570 1209 aa20.59■□□□□ 0.89
CGREF1-205ENST00000404694 MXD3Q9BW11 206 aa20.59■□□□□ 0.89
CGREF1-205ENST00000404694 LRRFIP2Q9Y608 721 aaKnown RBP20.59■□□□□ 0.89
CGREF1-205ENST00000404694 UBE4AQ14139 1066 aa20.58■□□□□ 0.88
CGREF1-205ENST00000404694 RBM26Q5T8P6 1007 aaKnown RBP20.58■□□□□ 0.88
CGREF1-205ENST00000404694 CLUAP1Q96AJ1 413 aa20.58■□□□□ 0.88
CGREF1-205ENST00000404694 GLIS2Q9BZE0 524 aaPredicted RBP20.58■□□□□ 0.88
CGREF1-205ENST00000404694 MYO3BQ8WXR4 1341 aa20.58■□□□□ 0.88
CGREF1-205ENST00000404694 USP17L8P0C7I0 530 aa20.57■□□□□ 0.88
CGREF1-205ENST00000404694 GTF2IP78347 998 aa20.57■□□□□ 0.88
CGREF1-205ENST00000404694 METTL24Q5JXM2 366 aa20.57■□□□□ 0.88
CGREF1-205ENST00000404694 TTLL5Q6EMB2 1281 aa20.57■□□□□ 0.88
CGREF1-205ENST00000404694 HDAC5Q9UQL6 1122 aa20.57■□□□□ 0.88
CGREF1-205ENST00000404694 POLR2AP24928 1970 aaKnown RBP20.56■□□□□ 0.88
CGREF1-205ENST00000404694 IL1R1P14778 569 aa20.56■□□□□ 0.88
CGREF1-205ENST00000404694 PTPN12Q05209 780 aaKnown RBP20.56■□□□□ 0.88
CGREF1-205ENST00000404694 VGLL2Q8N8G2 317 aa20.56■□□□□ 0.88
CGREF1-205ENST00000404694 JMYQ8N9B5 988 aa20.56■□□□□ 0.88
CGREF1-205ENST00000404694 CNTNAP1P78357 1384 aa20.55■□□□□ 0.88
CGREF1-205ENST00000404694 GNAI3P08754 354 aa20.55■□□□□ 0.88
CGREF1-205ENST00000404694 CDC37L1Q7L3B6 337 aa20.55■□□□□ 0.88
CGREF1-205ENST00000404694 MYOZ2Q9NPC6 264 aa20.55■□□□□ 0.88
CGREF1-205ENST00000404694 MKRN1Q9UHC7 482 aaKnown RBP20.55■□□□□ 0.88
CGREF1-205ENST00000404694 EYA2O00167 538 aa20.54■□□□□ 0.88
CGREF1-205ENST00000404694 PDE8BO95263 885 aa20.54■□□□□ 0.88
CGREF1-205ENST00000404694 ASTN2O75129 1339 aaPredicted RBP20.53■□□□□ 0.88
CGREF1-205ENST00000404694 CST9Q5W186 159 aa20.53■□□□□ 0.88
CGREF1-205ENST00000404694 TMEM57Q8N5G2 664 aa20.53■□□□□ 0.88
CGREF1-205ENST00000404694 GGA3Q9NZ52 723 aa20.53■□□□□ 0.88
CGREF1-205ENST00000404694 GYG1P46976 350 aa20.52■□□□□ 0.88
CGREF1-205ENST00000404694 AAMPQ13685 434 aa20.52■□□□□ 0.88
CGREF1-205ENST00000404694 KRT26Q7Z3Y9 468 aa20.52■□□□□ 0.88
CGREF1-205ENST00000404694 KIAA0825Q8IV33 1275 aa20.52■□□□□ 0.88
CGREF1-205ENST00000404694 OGFOD1Q8N543 542 aa20.52■□□□□ 0.88
CGREF1-205ENST00000404694 DCPSQ96C86 337 aaKnown RBP20.52■□□□□ 0.88
CGREF1-205ENST00000404694 FAM84BQ96KN1 310 aaPredicted RBP20.52■□□□□ 0.88
CGREF1-205ENST00000404694 ARAP2Q8WZ64 1704 aa20.51■□□□□ 0.87
CGREF1-205ENST00000404694 HIBADHP31937 336 aaKnown RBP20.51■□□□□ 0.87
CGREF1-205ENST00000404694 SCARF1Q14162 830 aa20.51■□□□□ 0.87
CGREF1-205ENST00000404694 ATG9AQ7Z3C6 839 aa20.51■□□□□ 0.87
CGREF1-205ENST00000404694 USP48Q86UV5 1035 aa20.51■□□□□ 0.87
CGREF1-205ENST00000404694 CERS5Q8N5B7 392 aa20.51■□□□□ 0.87
CGREF1-205ENST00000404694 SIL1Q9H173 461 aa20.51■□□□□ 0.87
CGREF1-205ENST00000404694 FBXO3Q9UK99 471 aa20.51■□□□□ 0.87
CGREF1-205ENST00000404694 ABT1Q9ULW3 272 aaKnown RBP20.51■□□□□ 0.87
CGREF1-205ENST00000404694 RASSF10A6NK89 507 aa20.5■□□□□ 0.87
CGREF1-205ENST00000404694 CELF2O95319 508 aaKnown RBP20.5■□□□□ 0.87
CGREF1-205ENST00000404694 IRX6P78412 446 aaPredicted RBP20.5■□□□□ 0.87
CGREF1-205ENST00000404694 DLK2Q6UY11 383 aa20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms