RNA–Protein interactions for RNA: ENST00000403971.2

HMGB3P19-201, Transcript of high mobility group box 3 pseudogene 19, humanhuman

BASIC

Gene HMGB3P19, Length 560 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P19-201ENST00000403971 STARD13Q9Y3M8 1113 aa8.31□□□□□ -1.08
HMGB3P19-201ENST00000403971 AK5Q9Y6K8 562 aa8.31□□□□□ -1.08
HMGB3P19-201ENST00000403971 SHISA8B8ZZ34 492 aa8.3□□□□□ -1.08
HMGB3P19-201ENST00000403971 E9PSI1 815 aa8.3□□□□□ -1.08
HMGB3P19-201ENST00000403971 SORBS3O60504 671 aa8.3□□□□□ -1.08
HMGB3P19-201ENST00000403971 PSAPL1Q6NUJ1 521 aa8.3□□□□□ -1.08
HMGB3P19-201ENST00000403971 ELMSAN1Q6PJG2 1045 aa8.3□□□□□ -1.08
HMGB3P19-201ENST00000403971 NUDT8Q8WV74 236 aa8.3□□□□□ -1.08
HMGB3P19-201ENST00000403971 EDARADDQ8WWZ3 215 aa8.3□□□□□ -1.08
HMGB3P19-201ENST00000403971 OIP5O43482 229 aa8.29□□□□□ -1.08
HMGB3P19-201ENST00000403971 CELA2BP08218 269 aaPredicted RBP8.29□□□□□ -1.08
HMGB3P19-201ENST00000403971 CTSHP09668 335 aa8.29□□□□□ -1.08
HMGB3P19-201ENST00000403971 ALAS2P22557 587 aa8.29□□□□□ -1.08
HMGB3P19-201ENST00000403971 EIF4BP23588 611 aaKnown RBP8.29□□□□□ -1.08
HMGB3P19-201ENST00000403971 CEP135Q66GS9 1140 aa8.29□□□□□ -1.08
HMGB3P19-201ENST00000403971 POP1Q99575 1024 aaKnown RBP8.29□□□□□ -1.08
HMGB3P19-201ENST00000403971 RBSNQ9H1K0 784 aa8.29□□□□□ -1.08
HMGB3P19-201ENST00000403971 TRIM33Q9UPN9 1127 aa8.29□□□□□ -1.08
HMGB3P19-201ENST00000403971 PDE2AO00408 941 aaPredicted RBP8.28□□□□□ -1.08
HMGB3P19-201ENST00000403971 RECKO95980 971 aa8.28□□□□□ -1.08
HMGB3P19-201ENST00000403971 ALBP02768 609 aa8.28□□□□□ -1.08
HMGB3P19-201ENST00000403971 BCRP11274 1271 aa8.28□□□□□ -1.08
HMGB3P19-201ENST00000403971 GRIA4P48058 902 aa8.28□□□□□ -1.08
HMGB3P19-201ENST00000403971 SPRED3Q2MJR0 410 aa8.28□□□□□ -1.08
HMGB3P19-201ENST00000403971 TSNAXIP1Q2TAA8 658 aa8.28□□□□□ -1.08
HMGB3P19-201ENST00000403971 LDLRAD1Q5T700 205 aa8.28□□□□□ -1.08
HMGB3P19-201ENST00000403971 C8orf86Q6ZUL3 223 aa8.28□□□□□ -1.08
HMGB3P19-201ENST00000403971 CCNJLQ8IV13 435 aa8.28□□□□□ -1.08
HMGB3P19-201ENST00000403971 MICALL1Q8N3F8 863 aa8.28□□□□□ -1.08
HMGB3P19-201ENST00000403971 TMEM102Q8N9M5 508 aaPredicted RBP8.28□□□□□ -1.08
HMGB3P19-201ENST00000403971 ASAP3Q8TDY4 903 aa8.28□□□□□ -1.08
HMGB3P19-201ENST00000403971 NXPE3Q969Y0 559 aa8.28□□□□□ -1.08
HMGB3P19-201ENST00000403971 FRMD6Q96NE9 622 aa8.28□□□□□ -1.08
HMGB3P19-201ENST00000403971 BACH2Q9BYV9 841 aa8.28□□□□□ -1.08
HMGB3P19-201ENST00000403971 ABCB6Q9NP58 842 aa8.28□□□□□ -1.08
HMGB3P19-201ENST00000403971 USP17L7P0C7H9 530 aa8.27□□□□□ -1.09
HMGB3P19-201ENST00000403971 FCGRTP55899 365 aa8.27□□□□□ -1.09
HMGB3P19-201ENST00000403971 CHSY3Q70JA7 882 aa8.27□□□□□ -1.09
HMGB3P19-201ENST00000403971 LACRTQ9GZZ8 138 aa8.27□□□□□ -1.09
HMGB3P19-201ENST00000403971 GIPC1O14908 333 aa8.26□□□□□ -1.09
HMGB3P19-201ENST00000403971 RGS9O75916 674 aaPredicted RBP8.26□□□□□ -1.09
HMGB3P19-201ENST00000403971 SMNDC1O75940 238 aaKnown RBP eCLIP8.26□□□□□ -1.09
HMGB3P19-201ENST00000403971 VAMP1P23763 118 aa8.26□□□□□ -1.09
HMGB3P19-201ENST00000403971 GDF6Q6KF10 455 aaPredicted RBP8.26□□□□□ -1.09
HMGB3P19-201ENST00000403971 PRPF40BQ6NWY9 871 aaKnown RBP8.26□□□□□ -1.09
HMGB3P19-201ENST00000403971 C20orf204Q6ZNR8 217 aa8.26□□□□□ -1.09
HMGB3P19-201ENST00000403971 BTBD6Q96KE9 485 aa8.26□□□□□ -1.09
HMGB3P19-201ENST00000403971 BHLHE41Q9C0J9 482 aaPredicted RBP8.26□□□□□ -1.09
HMGB3P19-201ENST00000403971 JPH1Q9HDC5 661 aaPredicted RBP8.26□□□□□ -1.09
HMGB3P19-201ENST00000403971 FAM8A1Q9UBU6 413 aa8.26□□□□□ -1.09
HMGB3P19-201ENST00000403971 TRAK1Q9UPV9 953 aa8.26□□□□□ -1.09
HMGB3P19-201ENST00000403971 TMEM238LA0A1B0GVL6 79 aa8.25□□□□□ -1.09
HMGB3P19-201ENST00000403971 MEI1Q5TIA1 1274 aa8.25□□□□□ -1.09
HMGB3P19-201ENST00000403971 ZNF385CQ66K41 422 aaPredicted RBP8.25□□□□□ -1.09
HMGB3P19-201ENST00000403971 C3orf58Q8NDZ4 430 aa8.25□□□□□ -1.09
HMGB3P19-201ENST00000403971 FRRS1LQ9P0K9 344 aa8.25□□□□□ -1.09
HMGB3P19-201ENST00000403971 M0R082 166 aa8.24□□□□□ -1.09
HMGB3P19-201ENST00000403971 AMPD1P23109 780 aa8.24□□□□□ -1.09
HMGB3P19-201ENST00000403971 GRIK5Q16478 980 aa8.24□□□□□ -1.09
HMGB3P19-201ENST00000403971 ZNF417Q8TAU3 575 aa8.24□□□□□ -1.09
HMGB3P19-201ENST00000403971 ZNF587Q96SQ5 575 aaPredicted RBP8.24□□□□□ -1.09
HMGB3P19-201ENST00000403971 SRCIN1Q9C0H9 1055 aa8.24□□□□□ -1.09
HMGB3P19-201ENST00000403971 BCL11AQ9H165 835 aa8.24□□□□□ -1.09
HMGB3P19-201ENST00000403971 MUC3BQ9H195 1237 aa8.24□□□□□ -1.09
HMGB3P19-201ENST00000403971 SH2B1Q9NRF2 756 aaPredicted RBP8.24□□□□□ -1.09
HMGB3P19-201ENST00000403971 A0A096LPE4 126 aa8.23□□□□□ -1.09
HMGB3P19-201ENST00000403971 A0A1W2PPZ6 126 aa8.23□□□□□ -1.09
HMGB3P19-201ENST00000403971 AFF1P51825 1210 aaKnown RBP8.23□□□□□ -1.09
HMGB3P19-201ENST00000403971 DTHD1Q6ZMT9 781 aa8.23□□□□□ -1.09
HMGB3P19-201ENST00000403971 TMEM87AQ8NBN3 555 aa8.23□□□□□ -1.09
HMGB3P19-201ENST00000403971 CRELD1Q96HD1 420 aa8.23□□□□□ -1.09
HMGB3P19-201ENST00000403971 PPP4R2Q9NY27 417 aa8.23□□□□□ -1.09
HMGB3P19-201ENST00000403971 AKAP2Q9Y2D5 859 aa8.23□□□□□ -1.09
HMGB3P19-201ENST00000403971 FBXO24O75426 580 aa8.22□□□□□ -1.09
HMGB3P19-201ENST00000403971 CDC25BP30305 580 aa8.22□□□□□ -1.09
HMGB3P19-201ENST00000403971 GSTT1P30711 240 aa8.22□□□□□ -1.09
HMGB3P19-201ENST00000403971 SVOPQ8N4V2 548 aa8.22□□□□□ -1.09
HMGB3P19-201ENST00000403971 TTC9Q92623 222 aa8.22□□□□□ -1.09
HMGB3P19-201ENST00000403971 LILRB5O75023 590 aa8.21□□□□□ -1.1
HMGB3P19-201ENST00000403971 HOXB4P17483 251 aaPredicted RBP8.21□□□□□ -1.1
HMGB3P19-201ENST00000403971 PTPRAP18433 802 aa8.21□□□□□ -1.1
HMGB3P19-201ENST00000403971 EPHA1P21709 976 aa8.21□□□□□ -1.1
HMGB3P19-201ENST00000403971 ITPKAP23677 461 aa8.21□□□□□ -1.1
HMGB3P19-201ENST00000403971 KANK3Q6NY19 840 aa8.21□□□□□ -1.1
HMGB3P19-201ENST00000403971 BSNDQ8WZ55 320 aa8.21□□□□□ -1.1
HMGB3P19-201ENST00000403971 LRRC4BQ9NT99 713 aa8.21□□□□□ -1.1
HMGB3P19-201ENST00000403971 SOX13Q9UN79 622 aa8.21□□□□□ -1.1
HMGB3P19-201ENST00000403971 CDC27P30260 824 aa8.2□□□□□ -1.1
HMGB3P19-201ENST00000403971 BAG6P46379 1132 aa8.2□□□□□ -1.1
HMGB3P19-201ENST00000403971 MAP3K10Q02779 954 aa8.2□□□□□ -1.1
HMGB3P19-201ENST00000403971 TXNDC11Q6PKC3 985 aa8.2□□□□□ -1.1
HMGB3P19-201ENST00000403971 VN1R5Q7Z5H4 357 aa8.2□□□□□ -1.1
HMGB3P19-201ENST00000403971 IL22RA1Q8N6P7 574 aa8.2□□□□□ -1.1
HMGB3P19-201ENST00000403971 NEDD1Q8NHV4 660 aa8.2□□□□□ -1.1
HMGB3P19-201ENST00000403971 ADAM19Q9H013 955 aa8.2□□□□□ -1.1
HMGB3P19-201ENST00000403971 ZNF576Q9H609 170 aa8.2□□□□□ -1.1
HMGB3P19-201ENST00000403971 TTF2Q9UNY4 1162 aaKnown RBP8.2□□□□□ -1.1
HMGB3P19-201ENST00000403971 WIPF1O43516 503 aa8.19□□□□□ -1.1
HMGB3P19-201ENST00000403971 LORP23490 312 aaPredicted RBP8.19□□□□□ -1.1
HMGB3P19-201ENST00000403971 ITGAEP38570 1179 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms