RNA–Protein interactions for RNA: ENST00000403162.7

CCDC47-202, Transcript of coiled-coil domain containing 47, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC47, Length 2,195 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-202ENST00000403162 NEURL1BA8MQ27 555 aa23.36■■□□□ 1.33
CCDC47-202ENST00000403162 MYL6BP14649 208 aa23.36■■□□□ 1.33
CCDC47-202ENST00000403162 RESTQ13127 1097 aa23.36■■□□□ 1.33
CCDC47-202ENST00000403162 RIC3Q7Z5B4 369 aa23.36■■□□□ 1.33
CCDC47-202ENST00000403162 SLC4A9Q96Q91 983 aa23.36■■□□□ 1.33
CCDC47-202ENST00000403162 ARID3AQ99856 593 aa23.36■■□□□ 1.33
CCDC47-202ENST00000403162 TEX13AQ9BXU3 409 aaPredicted RBP23.36■■□□□ 1.33
CCDC47-202ENST00000403162 PIP4K2AP48426 406 aaPredicted RBP23.35■■□□□ 1.33
CCDC47-202ENST00000403162 NEXNQ0ZGT2 675 aa23.35■■□□□ 1.33
CCDC47-202ENST00000403162 STK3Q13188 491 aa23.35■■□□□ 1.33
CCDC47-202ENST00000403162 PGBD1Q96JS3 809 aa23.35■■□□□ 1.33
CCDC47-202ENST00000403162 RIOK3O14730 519 aaKnown RBP23.35■■□□□ 1.33
CCDC47-202ENST00000403162 CAVIN2O95810 425 aa23.35■■□□□ 1.33
CCDC47-202ENST00000403162 ZNF75DP51815 510 aa23.35■■□□□ 1.33
CCDC47-202ENST00000403162 GCKRQ14397 625 aa23.35■■□□□ 1.33
CCDC47-202ENST00000403162 COPRSQ9NQ92 184 aa23.35■■□□□ 1.33
CCDC47-202ENST00000403162 COL15A1P39059 1388 aa23.35■■□□□ 1.33
CCDC47-202ENST00000403162 NR1I2O75469 434 aa23.34■■□□□ 1.33
CCDC47-202ENST00000403162 KLHDC4Q8TBB5 520 aa23.34■■□□□ 1.33
CCDC47-202ENST00000403162 NEK1Q96PY6 1258 aa23.34■■□□□ 1.33
CCDC47-202ENST00000403162 PRDM4Q9UKN5 801 aa23.34■■□□□ 1.33
CCDC47-202ENST00000403162 CTIFO43310 598 aaKnown RBP23.34■■□□□ 1.33
CCDC47-202ENST00000403162 ZSCAN16Q9H4T2 348 aaPredicted RBP23.34■■□□□ 1.33
CCDC47-202ENST00000403162 SBF2Q86WG5 1849 aa23.33■■□□□ 1.33
CCDC47-202ENST00000403162 LOC102724428A0A0B4J2F2 783 aa23.33■■□□□ 1.33
CCDC47-202ENST00000403162 STARD3NLO95772 234 aa23.33■■□□□ 1.33
CCDC47-202ENST00000403162 A1BGP04217 495 aa23.33■■□□□ 1.33
CCDC47-202ENST00000403162 SIK1P57059 783 aa23.33■■□□□ 1.33
CCDC47-202ENST00000403162 CCDC186Q7Z3E2 898 aa23.33■■□□□ 1.33
CCDC47-202ENST00000403162 U3KPZ7 1027 aaPredicted RBP23.33■■□□□ 1.33
CCDC47-202ENST00000403162 MYH15Q9Y2K3 1946 aa23.33■■□□□ 1.32
CCDC47-202ENST00000403162 JAK2O60674 1132 aa23.33■■□□□ 1.32
CCDC47-202ENST00000403162 BICD2Q8TD16 824 aa23.33■■□□□ 1.32
CCDC47-202ENST00000403162 BRF1Q92994 677 aa23.33■■□□□ 1.32
CCDC47-202ENST00000403162 BTAF1O14981 1849 aa23.32■■□□□ 1.32
CCDC47-202ENST00000403162 ATP6V1AP38606 617 aa23.32■■□□□ 1.32
CCDC47-202ENST00000403162 EPHA10Q5JZY3 1008 aa23.32■■□□□ 1.32
CCDC47-202ENST00000403162 ANKRD7Q92527 254 aa23.32■■□□□ 1.32
CCDC47-202ENST00000403162 EDC3Q96F86 508 aaKnown RBP23.32■■□□□ 1.32
CCDC47-202ENST00000403162 METTL22Q9BUU2 404 aaPredicted RBP23.32■■□□□ 1.32
CCDC47-202ENST00000403162 TRIM5Q9C035 493 aa23.32■■□□□ 1.32
CCDC47-202ENST00000403162 DBNLQ9UJU6 430 aaKnown RBP23.32■■□□□ 1.32
CCDC47-202ENST00000403162 ZNF609O15014 1411 aa23.31■■□□□ 1.32
CCDC47-202ENST00000403162 ZNF165P49910 485 aa23.31■■□□□ 1.32
CCDC47-202ENST00000403162 BCL11BQ9C0K0 894 aaPredicted RBP23.31■■□□□ 1.32
CCDC47-202ENST00000403162 CDC25BP30305 580 aa23.31■■□□□ 1.32
CCDC47-202ENST00000403162 TNNI3KQ59H18 835 aa23.31■■□□□ 1.32
CCDC47-202ENST00000403162 CFAP45Q9UL16 551 aa23.31■■□□□ 1.32
CCDC47-202ENST00000403162 FPGT-TNNI3KV9GXZ4 949 aa23.31■■□□□ 1.32
CCDC47-202ENST00000403162 NBPF26B4DH59 902 aa23.3■■□□□ 1.32
CCDC47-202ENST00000403162 RFX5P48382 616 aaPredicted RBP23.3■■□□□ 1.32
CCDC47-202ENST00000403162 NBPF14Q5TI25 921 aa23.3■■□□□ 1.32
CCDC47-202ENST00000403162 ZSCAN25Q6NSZ9 544 aa23.3■■□□□ 1.32
CCDC47-202ENST00000403162 NBPF10Q6P3W6 841 aaKnown RBP23.3■■□□□ 1.32
CCDC47-202ENST00000403162 Q6ZUG5 572 aa23.3■■□□□ 1.32
CCDC47-202ENST00000403162 NBPF15Q8N660 670 aa23.3■■□□□ 1.32
CCDC47-202ENST00000403162 FAM177BA6PVY3 158 aa23.3■■□□□ 1.32
CCDC47-202ENST00000403162 DRC7Q8IY82 874 aa23.3■■□□□ 1.32
CCDC47-202ENST00000403162 SMARCC2Q8TAQ2 1214 aa23.3■■□□□ 1.32
CCDC47-202ENST00000403162 LLPHQ9BRT6 129 aaKnown RBP23.3■■□□□ 1.32
CCDC47-202ENST00000403162 H3BQV1 296 aa23.29■■□□□ 1.32
CCDC47-202ENST00000403162 TRIM37O94972 964 aa23.29■■□□□ 1.32
CCDC47-202ENST00000403162 CYP19A1P11511 503 aaPredicted RBP23.29■■□□□ 1.32
CCDC47-202ENST00000403162 IFFO2Q5TF58 517 aa23.29■■□□□ 1.32
CCDC47-202ENST00000403162 XAGE3Q8WTP9 111 aa23.29■■□□□ 1.32
CCDC47-202ENST00000403162 MYD88Q99836 296 aa23.29■■□□□ 1.32
CCDC47-202ENST00000403162 DNAJC25Q9H1X3 360 aa23.29■■□□□ 1.32
CCDC47-202ENST00000403162 PTPN12Q05209 780 aaKnown RBP23.28■■□□□ 1.32
CCDC47-202ENST00000403162 LRMPQ12912 555 aa23.28■■□□□ 1.32
CCDC47-202ENST00000403162 PPP4R3BQ5MIZ7 849 aa23.28■■□□□ 1.32
CCDC47-202ENST00000403162 COPS6Q7L5N1 327 aa23.28■■□□□ 1.32
CCDC47-202ENST00000403162 LRP10Q7Z4F1 713 aa23.28■■□□□ 1.32
CCDC47-202ENST00000403162 PDCL2Q8N4E4 241 aa23.28■■□□□ 1.32
CCDC47-202ENST00000403162 NRBP1Q9UHY1 535 aa23.28■■□□□ 1.32
CCDC47-202ENST00000403162 TJP1Q07157 1748 aa23.28■■□□□ 1.32
CCDC47-202ENST00000403162 AFDNP55196 1824 aaKnown RBP23.27■■□□□ 1.32
CCDC47-202ENST00000403162 LAMA4Q16363 1823 aa23.27■■□□□ 1.32
CCDC47-202ENST00000403162 CYP21A2P08686 494 aa23.27■■□□□ 1.32
CCDC47-202ENST00000403162 TFCP2Q12800 502 aa23.27■■□□□ 1.32
CCDC47-202ENST00000403162 RABL6Q3YEC7 729 aaPredicted RBP23.27■■□□□ 1.32
CCDC47-202ENST00000403162 MCMDC2Q4G0Z9 681 aa23.27■■□□□ 1.32
CCDC47-202ENST00000403162 SARM1Q6SZW1 724 aa23.27■■□□□ 1.32
CCDC47-202ENST00000403162 HAUS7Q99871 368 aa23.27■■□□□ 1.32
CCDC47-202ENST00000403162 HSP90B1P14625 803 aaKnown RBP23.27■■□□□ 1.32
CCDC47-202ENST00000403162 ITPK1Q13572 414 aa23.27■■□□□ 1.32
CCDC47-202ENST00000403162 CTAGE5O15320 804 aa23.26■■□□□ 1.31
CCDC47-202ENST00000403162 PFKFB2O60825 505 aa23.26■■□□□ 1.31
CCDC47-202ENST00000403162 HMGB1P09429 215 aaKnown RBP23.26■■□□□ 1.31
CCDC47-202ENST00000403162 SYCP1Q15431 976 aa23.26■■□□□ 1.31
CCDC47-202ENST00000403162 NAA16Q6N069 864 aaPredicted RBP23.26■■□□□ 1.31
CCDC47-202ENST00000403162 CLIP2Q9UDT6 1046 aa23.26■■□□□ 1.31
CCDC47-202ENST00000403162 SCRN1Q12765 414 aa23.25■■□□□ 1.31
CCDC47-202ENST00000403162 ZNF330Q9Y3S2 320 aaPredicted RBP23.25■■□□□ 1.31
CCDC47-202ENST00000403162 SH3TC1Q8TE82 1336 aa23.25■■□□□ 1.31
CCDC47-202ENST00000403162 SMTNL1A8MU46 457 aa23.25■■□□□ 1.31
CCDC47-202ENST00000403162 ADD1P35611 737 aaKnown RBP23.25■■□□□ 1.31
CCDC47-202ENST00000403162 KCNQ4P56696 695 aa23.25■■□□□ 1.31
CCDC47-202ENST00000403162 IQCB1Q15051 598 aa23.25■■□□□ 1.31
CCDC47-202ENST00000403162 UTP14CQ5TAP6 766 aaKnown RBP23.25■■□□□ 1.31
CCDC47-202ENST00000403162 RCOR1Q9UKL0 485 aa23.25■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms