RNA–Protein interactions for RNA: ENST00000401642.7

SCFD2-202, Transcript of sec1 family domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCFD2, Length 3,176 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD2-202ENST00000401642 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.04□□□□□ -0.32
SCFD2-202ENST00000401642 IQSEC3Q9UPP2 1182 aaPredicted RBP13.04□□□□□ -0.32
SCFD2-202ENST00000401642 MRVI1Q9Y6F6 885 aa13.04□□□□□ -0.32
SCFD2-202ENST00000401642 PCDH11XQ9BZA7 1347 aa13.04□□□□□ -0.32
SCFD2-202ENST00000401642 PCDH11YQ9BZA8 1340 aa13.04□□□□□ -0.32
SCFD2-202ENST00000401642 HS1BP3Q53T59 392 aa13.04□□□□□ -0.32
SCFD2-202ENST00000401642 CCAR1Q8IX12 1150 aaKnown RBP13.04□□□□□ -0.32
SCFD2-202ENST00000401642 PUS7LQ9H0K6 701 aaKnown RBP13.04□□□□□ -0.32
SCFD2-202ENST00000401642 BIN1O00499 593 aa13.04□□□□□ -0.32
SCFD2-202ENST00000401642 CPLX1O14810 134 aa13.04□□□□□ -0.32
SCFD2-202ENST00000401642 TPM2P07951 284 aa13.04□□□□□ -0.32
SCFD2-202ENST00000401642 USP28Q96RU2 1077 aa13.04□□□□□ -0.32
SCFD2-202ENST00000401642 ZNF165P49910 485 aa13.03□□□□□ -0.32
SCFD2-202ENST00000401642 CCDC186Q7Z3E2 898 aa13.03□□□□□ -0.32
SCFD2-202ENST00000401642 NSUN7Q8NE18 718 aaKnown RBP13.03□□□□□ -0.32
SCFD2-202ENST00000401642 GREM2Q9H772 168 aa13.03□□□□□ -0.32
SCFD2-202ENST00000401642 BTG4Q9NY30 223 aa13.03□□□□□ -0.32
SCFD2-202ENST00000401642 TRMT112Q9UI30 125 aaKnown RBP13.03□□□□□ -0.32
SCFD2-202ENST00000401642 TUBGCP6Q96RT7 1819 aa13.03□□□□□ -0.32
SCFD2-202ENST00000401642 MST1RQ04912 1400 aa13.03□□□□□ -0.32
SCFD2-202ENST00000401642 KLF18A0A0U1RQI7 1052 aa13.03□□□□□ -0.32
SCFD2-202ENST00000401642 GOLGA8BA8MQT2 603 aa13.03□□□□□ -0.32
SCFD2-202ENST00000401642 CTDNEP1O95476 244 aa13.03□□□□□ -0.32
SCFD2-202ENST00000401642 PIGBQ92521 554 aa13.03□□□□□ -0.32
SCFD2-202ENST00000401642 CHMP4CQ96CF2 233 aa13.03□□□□□ -0.32
SCFD2-202ENST00000401642 SLAIN2Q9P270 581 aa13.03□□□□□ -0.32
SCFD2-202ENST00000401642 LMO7Q8WWI1 1683 aa13.02□□□□□ -0.32
SCFD2-202ENST00000401642 RALYLQ86SE5 291 aaKnown RBP13.02□□□□□ -0.32
SCFD2-202ENST00000401642 CCDC191Q8NCU4 936 aa13.02□□□□□ -0.32
SCFD2-202ENST00000401642 MYL10Q9BUA6 226 aa13.02□□□□□ -0.32
SCFD2-202ENST00000401642 WDR17Q8IZU2 1322 aa13.02□□□□□ -0.32
SCFD2-202ENST00000401642 ZNF335Q9H4Z2 1342 aaPredicted RBP13.02□□□□□ -0.32
SCFD2-202ENST00000401642 A0A1B0GVL5 298 aa13.02□□□□□ -0.33
SCFD2-202ENST00000401642 FGAP02671 866 aa13.02□□□□□ -0.33
SCFD2-202ENST00000401642 RESTQ13127 1097 aa13.02□□□□□ -0.33
SCFD2-202ENST00000401642 RRP12Q5JTH9 1297 aaKnown RBP13.02□□□□□ -0.33
SCFD2-202ENST00000401642 ZNF592Q92610 1267 aa13.02□□□□□ -0.33
SCFD2-202ENST00000401642 ACSBG1Q96GR2 724 aa13.02□□□□□ -0.33
SCFD2-202ENST00000401642 AIFM3Q96NN9 605 aa13.02□□□□□ -0.33
SCFD2-202ENST00000401642 ZMYM1Q5SVZ6 1142 aa13.02□□□□□ -0.33
SCFD2-202ENST00000401642 USPL1Q5W0Q7 1092 aa13.02□□□□□ -0.33
SCFD2-202ENST00000401642 FILIP1Q7Z7B0 1213 aa13.02□□□□□ -0.33
SCFD2-202ENST00000401642 FAM200AQ8TCP9 573 aa13.02□□□□□ -0.33
SCFD2-202ENST00000401642 SDF4Q9BRK5 362 aa13.02□□□□□ -0.33
SCFD2-202ENST00000401642 FUCA2Q9BTY2 467 aa13.02□□□□□ -0.33
SCFD2-202ENST00000401642 ITGA6P23229 1130 aa13.01□□□□□ -0.33
SCFD2-202ENST00000401642 PDIA3P30101 505 aaKnown RBP13.01□□□□□ -0.33
SCFD2-202ENST00000401642 UVSSAQ2YD98 709 aa13.01□□□□□ -0.33
SCFD2-202ENST00000401642 SLC9C2Q5TAH2 1124 aa13.01□□□□□ -0.33
SCFD2-202ENST00000401642 FSIP1Q8NA03 581 aa13.01□□□□□ -0.33
SCFD2-202ENST00000401642 SLIT3O75094 1523 aa13.01□□□□□ -0.33
SCFD2-202ENST00000401642 PRC1O43663 620 aa13.01□□□□□ -0.33
SCFD2-202ENST00000401642 TCIRG1Q13488 830 aa13.01□□□□□ -0.33
SCFD2-202ENST00000401642 ATP2B3Q16720 1220 aa13.01□□□□□ -0.33
SCFD2-202ENST00000401642 CCDC73Q6ZRK6 1079 aa13.01□□□□□ -0.33
SCFD2-202ENST00000401642 PDCL3Q9H2J4 239 aa13.01□□□□□ -0.33
SCFD2-202ENST00000401642 BECN2A8MW95 431 aa13□□□□□ -0.33
SCFD2-202ENST00000401642 GOLGA6L19H0YKK7 550 aa13□□□□□ -0.33
SCFD2-202ENST00000401642 ATP2B1P20020 1258 aa13□□□□□ -0.33
SCFD2-202ENST00000401642 TNS3Q68CZ2 1445 aa13□□□□□ -0.33
SCFD2-202ENST00000401642 MARCKSP29966 332 aaPredicted RBP13□□□□□ -0.33
SCFD2-202ENST00000401642 GNL2Q13823 731 aaKnown RBP13□□□□□ -0.33
SCFD2-202ENST00000401642 ARID5BQ14865 1188 aa13□□□□□ -0.33
SCFD2-202ENST00000401642 IMMTQ16891 758 aaKnown RBP13□□□□□ -0.33
SCFD2-202ENST00000401642 MICU3Q86XE3 530 aa13□□□□□ -0.33
SCFD2-202ENST00000401642 NKX2-3Q8TAU0 364 aa13□□□□□ -0.33
SCFD2-202ENST00000401642 C16orf45Q96MC5 204 aaPredicted RBP13□□□□□ -0.33
SCFD2-202ENST00000401642 KCNF1Q9H3M0 494 aa13□□□□□ -0.33
SCFD2-202ENST00000401642 GOLPH3LQ9H4A5 285 aa13□□□□□ -0.33
SCFD2-202ENST00000401642 C5P01031 1676 aa13□□□□□ -0.33
SCFD2-202ENST00000401642 GPAA1O43292 621 aa13□□□□□ -0.33
SCFD2-202ENST00000401642 ADAMTS2O95450 1211 aa13□□□□□ -0.33
SCFD2-202ENST00000401642 C11orf57Q6ZUT1 292 aaPredicted RBP13□□□□□ -0.33
SCFD2-202ENST00000401642 ORC3Q9UBD5 711 aaPredicted RBP13□□□□□ -0.33
SCFD2-202ENST00000401642 CFAP45Q9UL16 551 aa13□□□□□ -0.33
SCFD2-202ENST00000401642 ZBTB1Q9Y2K1 713 aa13□□□□□ -0.33
SCFD2-202ENST00000401642 UBE2Q2LH0YL09 131 aa12.99□□□□□ -0.33
SCFD2-202ENST00000401642 ZNF213O14771 459 aa12.99□□□□□ -0.33
SCFD2-202ENST00000401642 KINO60870 393 aaKnown RBP12.99□□□□□ -0.33
SCFD2-202ENST00000401642 KCNQ4P56696 695 aa12.99□□□□□ -0.33
SCFD2-202ENST00000401642 NFXL1Q6ZNB6 911 aa12.99□□□□□ -0.33
SCFD2-202ENST00000401642 SMIM5Q71RC9 77 aa12.99□□□□□ -0.33
SCFD2-202ENST00000401642 PHKBQ93100 1093 aa12.99□□□□□ -0.33
SCFD2-202ENST00000401642 PRDM10Q9NQV6 1147 aa12.99□□□□□ -0.33
SCFD2-202ENST00000401642 HELLSQ9NRZ9 838 aa12.99□□□□□ -0.33
SCFD2-202ENST00000401642 PFKFB2O60825 505 aa12.99□□□□□ -0.33
SCFD2-202ENST00000401642 STK38Q15208 465 aa12.99□□□□□ -0.33
SCFD2-202ENST00000401642 ZKSCAN3Q9BRR0 538 aa12.99□□□□□ -0.33
SCFD2-202ENST00000401642 IRS4O14654 1257 aaPredicted RBP12.98□□□□□ -0.33
SCFD2-202ENST00000401642 STARD3NLO95772 234 aa12.98□□□□□ -0.33
SCFD2-202ENST00000401642 ADD1P35611 737 aaKnown RBP12.98□□□□□ -0.33
SCFD2-202ENST00000401642 ZRSR1Q15695 479 aaKnown RBP12.98□□□□□ -0.33
SCFD2-202ENST00000401642 PTPN21Q16825 1174 aa12.98□□□□□ -0.33
SCFD2-202ENST00000401642 C8orf76Q96K31 380 aa12.98□□□□□ -0.33
SCFD2-202ENST00000401642 CLSTN2Q9H4D0 955 aa12.98□□□□□ -0.33
SCFD2-202ENST00000401642 GOLGB1Q14789 3259 aaKnown RBP12.98□□□□□ -0.33
SCFD2-202ENST00000401642 ERVV-2B6SEH9 535 aa12.98□□□□□ -0.33
SCFD2-202ENST00000401642 PHKA1P46020 1223 aa12.98□□□□□ -0.33
SCFD2-202ENST00000401642 CMTR1Q8N1G2 835 aaKnown RBP12.98□□□□□ -0.33
SCFD2-202ENST00000401642 SENP2Q9HC62 589 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms