RNA–Protein interactions for RNA: ENST00000401605.5

CLIP4-202, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 2 BASIC

Gene CLIP4, Length 2,322 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-202ENST00000401605 LNPKQ9C0E8 428 aa7.43□□□□□ -1.22
CLIP4-202ENST00000401605 KLHL42Q9P2K6 505 aa7.43□□□□□ -1.22
CLIP4-202ENST00000401605 BCS1LQ9Y276 419 aa7.43□□□□□ -1.22
CLIP4-202ENST00000401605 ITGB4P16144 1822 aa7.42□□□□□ -1.22
CLIP4-202ENST00000401605 PXDNLA1KZ92 1463 aa7.42□□□□□ -1.22
CLIP4-202ENST00000401605 COL3A1P02461 1466 aaPredicted RBP7.42□□□□□ -1.22
CLIP4-202ENST00000401605 IPO8O15397 1037 aaKnown RBP7.42□□□□□ -1.22
CLIP4-202ENST00000401605 KIF1CO43896 1103 aaKnown RBP7.42□□□□□ -1.22
CLIP4-202ENST00000401605 STARD3NLO95772 234 aa7.42□□□□□ -1.22
CLIP4-202ENST00000401605 ERCC5P28715 1186 aaPredicted RBP7.42□□□□□ -1.22
CLIP4-202ENST00000401605 ZNF280DQ6N043 979 aa7.42□□□□□ -1.22
CLIP4-202ENST00000401605 KRBA2Q6ZNG9 492 aa7.42□□□□□ -1.22
CLIP4-202ENST00000401605 SMC4Q9NTJ3 1288 aa7.42□□□□□ -1.22
CLIP4-202ENST00000401605 ZBTB1Q9Y2K1 713 aa7.42□□□□□ -1.22
CLIP4-202ENST00000401605 ADCY9O60503 1353 aa7.42□□□□□ -1.22
CLIP4-202ENST00000401605 ATP10DQ9P241 1426 aa7.42□□□□□ -1.22
CLIP4-202ENST00000401605 SENP3-EIF4A1A0A087X0R7 540 aa7.41□□□□□ -1.22
CLIP4-202ENST00000401605 MPHOSPH10O00566 681 aaKnown RBP7.41□□□□□ -1.22
CLIP4-202ENST00000401605 DPEP1P16444 411 aa7.41□□□□□ -1.22
CLIP4-202ENST00000401605 PRKAR2BP31323 418 aa7.41□□□□□ -1.22
CLIP4-202ENST00000401605 DDR1Q08345 913 aa7.41□□□□□ -1.22
CLIP4-202ENST00000401605 ZNF790Q6PG37 636 aa7.41□□□□□ -1.22
CLIP4-202ENST00000401605 TBC1D9Q6ZT07 1266 aa7.41□□□□□ -1.22
CLIP4-202ENST00000401605 IL17REQ8NFR9 667 aa7.41□□□□□ -1.22
CLIP4-202ENST00000401605 CXorf38Q8TB03 319 aa7.41□□□□□ -1.22
CLIP4-202ENST00000401605 NCAPGQ9BPX3 1015 aa7.41□□□□□ -1.22
CLIP4-202ENST00000401605 NDUFB9Q9Y6M9 179 aa7.41□□□□□ -1.22
CLIP4-202ENST00000401605 TAF1LQ8IZX4 1826 aa7.41□□□□□ -1.22
CLIP4-202ENST00000401605 UBR3Q6ZT12 1888 aa7.41□□□□□ -1.22
CLIP4-202ENST00000401605 ZNF831Q5JPB2 1677 aa7.41□□□□□ -1.22
CLIP4-202ENST00000401605 CCDC66A2RUB6 948 aa7.41□□□□□ -1.22
CLIP4-202ENST00000401605 ZNF853P0CG23 659 aa7.41□□□□□ -1.22
CLIP4-202ENST00000401605 PPP2R1AP30153 589 aa7.41□□□□□ -1.22
CLIP4-202ENST00000401605 TM4SF1P30408 202 aa7.41□□□□□ -1.22
CLIP4-202ENST00000401605 FOXK1P85037 733 aa7.41□□□□□ -1.22
CLIP4-202ENST00000401605 FOXD4Q12950 439 aaPredicted RBP7.41□□□□□ -1.22
CLIP4-202ENST00000401605 CT47A1Q5JQC4 288 aaPredicted RBP7.41□□□□□ -1.22
CLIP4-202ENST00000401605 USPL1Q5W0Q7 1092 aa7.41□□□□□ -1.22
CLIP4-202ENST00000401605 TEX13AQ9BXU3 409 aaPredicted RBP7.41□□□□□ -1.22
CLIP4-202ENST00000401605 HMX1Q9NP08 348 aaPredicted RBP7.41□□□□□ -1.22
CLIP4-202ENST00000401605 NARFQ9UHQ1 456 aa7.41□□□□□ -1.22
CLIP4-202ENST00000401605 CICQ96RK0 1608 aaPredicted RBP7.41□□□□□ -1.22
CLIP4-202ENST00000401605 COL15A1P39059 1388 aa7.4□□□□□ -1.22
CLIP4-202ENST00000401605 KIF16BQ96L93 1317 aa7.4□□□□□ -1.22
CLIP4-202ENST00000401605 POLRMTO00411 1230 aaKnown RBP7.4□□□□□ -1.22
CLIP4-202ENST00000401605 MAP3K13O43283 966 aa7.4□□□□□ -1.22
CLIP4-202ENST00000401605 U2AF1L5P0DN76 240 aaPredicted RBP7.4□□□□□ -1.22
CLIP4-202ENST00000401605 U2AF1Q01081 240 aaKnown RBP eCLIP7.4□□□□□ -1.22
CLIP4-202ENST00000401605 WASHC4Q2M389 1173 aa7.4□□□□□ -1.22
CLIP4-202ENST00000401605 FBXO33Q7Z6M2 555 aa7.4□□□□□ -1.22
CLIP4-202ENST00000401605 ZNF496Q96IT1 587 aaPredicted RBP7.4□□□□□ -1.22
CLIP4-202ENST00000401605 PHACTR3Q96KR7 559 aa7.4□□□□□ -1.22
CLIP4-202ENST00000401605 PIM2Q9P1W9 311 aa7.4□□□□□ -1.22
CLIP4-202ENST00000401605 BIN2Q9UBW5 565 aaPredicted RBP7.4□□□□□ -1.22
CLIP4-202ENST00000401605 ANAPC4Q9UJX5 808 aa7.4□□□□□ -1.22
CLIP4-202ENST00000401605 CEMIPQ8WUJ3 1361 aa7.4□□□□□ -1.23
CLIP4-202ENST00000401605 A0A087WZG4 1122 aa7.4□□□□□ -1.23
CLIP4-202ENST00000401605 NFIXQ14938 502 aa7.4□□□□□ -1.23
CLIP4-202ENST00000401605 CTR9Q6PD62 1173 aa7.4□□□□□ -1.23
CLIP4-202ENST00000401605 METTL3Q86U44 580 aaKnown RBP7.4□□□□□ -1.23
CLIP4-202ENST00000401605 FMNL2Q96PY5 1086 aa7.4□□□□□ -1.23
CLIP4-202ENST00000401605 HEG1Q9ULI3 1381 aa7.39□□□□□ -1.23
CLIP4-202ENST00000401605 HMGB1P1B2RPK0 211 aaPredicted RBP7.39□□□□□ -1.23
CLIP4-202ENST00000401605 ZRANB2O95218 330 aaKnown RBP eCLIP7.39□□□□□ -1.23
CLIP4-202ENST00000401605 KCNA3P22001 575 aa7.39□□□□□ -1.23
CLIP4-202ENST00000401605 EIF5P55010 431 aaKnown RBP7.39□□□□□ -1.23
CLIP4-202ENST00000401605 UVSSAQ2YD98 709 aa7.39□□□□□ -1.23
CLIP4-202ENST00000401605 DALRD3Q5D0E6 543 aaKnown RBP7.39□□□□□ -1.23
CLIP4-202ENST00000401605 CCDC181Q5TID7 509 aa7.39□□□□□ -1.23
CLIP4-202ENST00000401605 ARHGAP27Q6ZUM4 889 aa7.39□□□□□ -1.23
CLIP4-202ENST00000401605 MNS1Q8NEH6 495 aa7.39□□□□□ -1.23
CLIP4-202ENST00000401605 RTF1Q92541 710 aaKnown RBP7.39□□□□□ -1.23
CLIP4-202ENST00000401605 PPP4R2Q9NY27 417 aa7.39□□□□□ -1.23
CLIP4-202ENST00000401605 RPS6KL1Q9Y6S9 549 aa7.39□□□□□ -1.23
CLIP4-202ENST00000401605 KCPQ6ZWJ8 1503 aa7.39□□□□□ -1.23
CLIP4-202ENST00000401605 BTBD11A6QL63 1104 aa7.39□□□□□ -1.23
CLIP4-202ENST00000401605 KIAA1211Q6ZU35 1233 aa7.39□□□□□ -1.23
CLIP4-202ENST00000401605 GET4Q7L5D6 327 aaPredicted RBP7.39□□□□□ -1.23
CLIP4-202ENST00000401605 PLPP6Q8IY26 295 aa7.39□□□□□ -1.23
CLIP4-202ENST00000401605 LARGE2Q8N3Y3 721 aa7.39□□□□□ -1.23
CLIP4-202ENST00000401605 BORCS6Q96GS4 357 aa7.39□□□□□ -1.23
CLIP4-202ENST00000401605 FRMD4BQ9Y2L6 1034 aa7.39□□□□□ -1.23
CLIP4-202ENST00000401605 SERPINB2P05120 415 aa7.38□□□□□ -1.23
CLIP4-202ENST00000401605 IL6STP40189 918 aaPredicted RBP7.38□□□□□ -1.23
CLIP4-202ENST00000401605 NFKBIBQ15653 356 aa7.38□□□□□ -1.23
CLIP4-202ENST00000401605 SUDS3Q9H7L9 328 aaPredicted RBP7.38□□□□□ -1.23
CLIP4-202ENST00000401605 BCL2L12Q9HB09 334 aa7.38□□□□□ -1.23
CLIP4-202ENST00000401605 TRIM6-TRIM34B2RNG4 842 aa7.38□□□□□ -1.23
CLIP4-202ENST00000401605 HTATSF1O43719 755 aaKnown RBP7.38□□□□□ -1.23
CLIP4-202ENST00000401605 CT47B1P0C2W7 299 aaPredicted RBP7.38□□□□□ -1.23
CLIP4-202ENST00000401605 CHRNA5P30532 468 aa7.38□□□□□ -1.23
CLIP4-202ENST00000401605 KCNJ4P48050 445 aa7.38□□□□□ -1.23
CLIP4-202ENST00000401605 WDR78Q5VTH9 848 aa7.38□□□□□ -1.23
CLIP4-202ENST00000401605 SPIRE2Q8WWL2 714 aa7.38□□□□□ -1.23
CLIP4-202ENST00000401605 DHX38Q92620 1227 aaKnown RBP7.38□□□□□ -1.23
CLIP4-202ENST00000401605 TRIM34Q9BYJ4 488 aa7.38□□□□□ -1.23
CLIP4-202ENST00000401605 BACH2Q9BYV9 841 aa7.38□□□□□ -1.23
CLIP4-202ENST00000401605 FAM13BQ9NYF5 915 aa7.38□□□□□ -1.23
CLIP4-202ENST00000401605 DONSONQ9NYP3 566 aa7.38□□□□□ -1.23
CLIP4-202ENST00000401605 CEP126Q9P2H0 1117 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms