RNA–Protein interactions for RNA: ENST00000401408.5

CLHC1-201, Transcript of clathrin heavy chain linker domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLHC1, Length 2,248 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1-201ENST00000401408 KANK4Q5T7N3 995 aaPredicted RBP4.78□□□□□ -1.64
CLHC1-201ENST00000401408 LCE2AQ5TA79 106 aaPredicted RBP4.78□□□□□ -1.64
CLHC1-201ENST00000401408 KANK3Q6NY19 840 aa4.78□□□□□ -1.64
CLHC1-201ENST00000401408 NBPF10Q6P3W6 841 aaKnown RBP4.78□□□□□ -1.64
CLHC1-201ENST00000401408 PRR7Q8TB68 274 aa4.78□□□□□ -1.64
CLHC1-201ENST00000401408 AGBL1Q96MI9 1066 aa4.78□□□□□ -1.64
CLHC1-201ENST00000401408 FAM161BQ96MY7 647 aa4.78□□□□□ -1.64
CLHC1-201ENST00000401408 PCGF6Q9BYE7 350 aa4.78□□□□□ -1.64
CLHC1-201ENST00000401408 SEZ6LQ9BYH1 1024 aa4.78□□□□□ -1.64
CLHC1-201ENST00000401408 SLKQ9H2G2 1235 aaPredicted RBP4.78□□□□□ -1.64
CLHC1-201ENST00000401408 RETREG1Q9H6L5 497 aa4.78□□□□□ -1.64
CLHC1-201ENST00000401408 PPCSQ9HAB8 311 aa4.78□□□□□ -1.64
CLHC1-201ENST00000401408 ABCC5O15440 1437 aa4.78□□□□□ -1.64
CLHC1-201ENST00000401408 KANK1Q14678 1352 aa4.78□□□□□ -1.64
CLHC1-201ENST00000401408 NEXMIFQ5QGS0 1516 aa4.78□□□□□ -1.64
CLHC1-201ENST00000401408 CCDC163A0A0D9SF12 145 aa4.77□□□□□ -1.65
CLHC1-201ENST00000401408 H3BRB1 525 aa4.77□□□□□ -1.65
CLHC1-201ENST00000401408 SMAPO00193 183 aa4.77□□□□□ -1.65
CLHC1-201ENST00000401408 SLC34A2O95436 690 aa4.77□□□□□ -1.65
CLHC1-201ENST00000401408 TGFB3P10600 412 aa4.77□□□□□ -1.65
CLHC1-201ENST00000401408 ATICP31939 592 aa4.77□□□□□ -1.65
CLHC1-201ENST00000401408 FLT3P36888 993 aa4.77□□□□□ -1.65
CLHC1-201ENST00000401408 PSMD2Q13200 908 aa4.77□□□□□ -1.65
CLHC1-201ENST00000401408 SIM2Q14190 667 aaPredicted RBP4.77□□□□□ -1.65
CLHC1-201ENST00000401408 EZH2Q15910 746 aaKnown RBP4.77□□□□□ -1.65
CLHC1-201ENST00000401408 RGL3Q3MIN7 710 aa4.77□□□□□ -1.65
CLHC1-201ENST00000401408 CCDC93Q567U6 631 aa4.77□□□□□ -1.65
CLHC1-201ENST00000401408 CDC42BPGQ6DT37 1551 aa4.77□□□□□ -1.65
CLHC1-201ENST00000401408 VPS37AQ8NEZ2 397 aa4.77□□□□□ -1.65
CLHC1-201ENST00000401408 ZNF830Q96NB3 372 aaPredicted RBP4.77□□□□□ -1.65
CLHC1-201ENST00000401408 ALDH8A1Q9H2A2 487 aaPredicted RBP4.77□□□□□ -1.65
CLHC1-201ENST00000401408 CXorf56Q9H5V9 222 aa4.77□□□□□ -1.65
CLHC1-201ENST00000401408 TUT1Q9H6E5 874 aaKnown RBP4.77□□□□□ -1.65
CLHC1-201ENST00000401408 ARNT2Q9HBZ2 717 aa4.77□□□□□ -1.65
CLHC1-201ENST00000401408 EPB41L3Q9Y2J2 1087 aaPredicted RBP4.77□□□□□ -1.65
CLHC1-201ENST00000401408 MYOM1P52179 1685 aa4.77□□□□□ -1.65
CLHC1-201ENST00000401408 SYNRGQ9UMZ2 1314 aa4.77□□□□□ -1.65
CLHC1-201ENST00000401408 NRKQ7Z2Y5 1582 aa4.77□□□□□ -1.65
CLHC1-201ENST00000401408 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.77□□□□□ -1.65
CLHC1-201ENST00000401408 ABL1P00519 1130 aa4.77□□□□□ -1.65
CLHC1-201ENST00000401408 NDUFV2P19404 249 aa4.77□□□□□ -1.65
CLHC1-201ENST00000401408 CDC27P30260 824 aa4.77□□□□□ -1.65
CLHC1-201ENST00000401408 NOS2P35228 1153 aa4.77□□□□□ -1.65
CLHC1-201ENST00000401408 PSMC1P62191 440 aaKnown RBP4.77□□□□□ -1.65
CLHC1-201ENST00000401408 SLFNL1Q499Z3 407 aa4.77□□□□□ -1.65
CLHC1-201ENST00000401408 PLEKHG4Q58EX7 1191 aa4.77□□□□□ -1.65
CLHC1-201ENST00000401408 GJC2Q5T442 439 aaPredicted RBP4.77□□□□□ -1.65
CLHC1-201ENST00000401408 USP48Q86UV5 1035 aa4.77□□□□□ -1.65
CLHC1-201ENST00000401408 ZSCAN29Q8IWY8 852 aaPredicted RBP4.77□□□□□ -1.65
CLHC1-201ENST00000401408 TEX19Q8NA77 164 aa4.77□□□□□ -1.65
CLHC1-201ENST00000401408 RNPC3Q96LT9 517 aaKnown RBP4.77□□□□□ -1.65
CLHC1-201ENST00000401408 HOMER2Q9NSB8 354 aa4.77□□□□□ -1.65
CLHC1-201ENST00000401408 HDAC9Q9UKV0 1011 aa4.77□□□□□ -1.65
CLHC1-201ENST00000401408 INPP5FQ9Y2H2 1132 aa4.77□□□□□ -1.65
CLHC1-201ENST00000401408 KCNQ2O43526 872 aa4.76□□□□□ -1.65
CLHC1-201ENST00000401408 MYL1P05976 194 aa4.76□□□□□ -1.65
CLHC1-201ENST00000401408 HSP90AB1P08238 724 aaKnown RBP4.76□□□□□ -1.65
CLHC1-201ENST00000401408 PEX19P40855 299 aa4.76□□□□□ -1.65
CLHC1-201ENST00000401408 PDE3BQ13370 1112 aa4.76□□□□□ -1.65
CLHC1-201ENST00000401408 COL19A1Q14993 1142 aa4.76□□□□□ -1.65
CLHC1-201ENST00000401408 KRT77Q7Z794 578 aa4.76□□□□□ -1.65
CLHC1-201ENST00000401408 SKAP1Q86WV1 359 aa4.76□□□□□ -1.65
CLHC1-201ENST00000401408 CHCHD4Q8N4Q1 142 aa4.76□□□□□ -1.65
CLHC1-201ENST00000401408 ERP27Q96DN0 273 aa4.76□□□□□ -1.65
CLHC1-201ENST00000401408 METTL5Q9NRN9 209 aaKnown RBP4.76□□□□□ -1.65
CLHC1-201ENST00000401408 EMILIN3Q9NT22 766 aa4.76□□□□□ -1.65
CLHC1-201ENST00000401408 ASAP1Q9ULH1 1129 aa4.76□□□□□ -1.65
CLHC1-201ENST00000401408 PHF8Q9UPP1 1060 aa4.76□□□□□ -1.65
CLHC1-201ENST00000401408 CHMP3Q9Y3E7 222 aa4.76□□□□□ -1.65
CLHC1-201ENST00000401408 NPHP3Q7Z494 1330 aa4.76□□□□□ -1.65
CLHC1-201ENST00000401408 PPP1R3GB7ZBB8 358 aa4.76□□□□□ -1.65
CLHC1-201ENST00000401408 RBP3P10745 1247 aa4.76□□□□□ -1.65
CLHC1-201ENST00000401408 ATP2B4P23634 1241 aa4.76□□□□□ -1.65
CLHC1-201ENST00000401408 TNNT2P45379 298 aaPredicted RBP4.76□□□□□ -1.65
CLHC1-201ENST00000401408 TMEM95Q3KNT9 176 aa4.76□□□□□ -1.65
CLHC1-201ENST00000401408 INO80DQ53TQ3 878 aaPredicted RBP4.76□□□□□ -1.65
CLHC1-201ENST00000401408 LARP1BQ659C4 914 aaKnown RBP4.76□□□□□ -1.65
CLHC1-201ENST00000401408 MCF2L2Q86YR7 1114 aa4.76□□□□□ -1.65
CLHC1-201ENST00000401408 SUGP1Q8IWZ8 645 aaKnown RBP4.76□□□□□ -1.65
CLHC1-201ENST00000401408 MYRIPQ8NFW9 859 aa4.76□□□□□ -1.65
CLHC1-201ENST00000401408 CCDC47Q96A33 483 aaKnown RBP4.76□□□□□ -1.65
CLHC1-201ENST00000401408 PHOX2BQ99453 314 aa4.76□□□□□ -1.65
CLHC1-201ENST00000401408 SPON1Q9HCB6 807 aa4.76□□□□□ -1.65
CLHC1-201ENST00000401408 ANO2Q9NQ90 1003 aa4.76□□□□□ -1.65
CLHC1-201ENST00000401408 FAM217BQ9NTX9 383 aaPredicted RBP4.76□□□□□ -1.65
CLHC1-201ENST00000401408 POLG2Q9UHN1 485 aa4.76□□□□□ -1.65
CLHC1-201ENST00000401408 DCTN4Q9UJW0 460 aa4.76□□□□□ -1.65
CLHC1-201ENST00000401408 MRPS23Q9Y3D9 190 aaKnown RBP4.76□□□□□ -1.65
CLHC1-201ENST00000401408 SPATA31A3Q5VYP0 1347 aa4.75□□□□□ -1.65
CLHC1-201ENST00000401408 CRYBG1Q9Y4K1 1723 aa4.75□□□□□ -1.65
CLHC1-201ENST00000401408 TMEM238LA0A1B0GVL6 79 aa4.75□□□□□ -1.65
CLHC1-201ENST00000401408 SLC26A4O43511 780 aa4.75□□□□□ -1.65
CLHC1-201ENST00000401408 ATP9BO43861 1147 aa4.75□□□□□ -1.65
CLHC1-201ENST00000401408 IGHDP01880 384 aa4.75□□□□□ -1.65
CLHC1-201ENST00000401408 USP17L8P0C7I0 530 aa4.75□□□□□ -1.65
CLHC1-201ENST00000401408 ZNF76P36508 570 aa4.75□□□□□ -1.65
CLHC1-201ENST00000401408 PBX2P40425 430 aa4.75□□□□□ -1.65
CLHC1-201ENST00000401408 ZNF211Q13398 564 aaPredicted RBP4.75□□□□□ -1.65
CLHC1-201ENST00000401408 MSL1Q68DK7 614 aa4.75□□□□□ -1.65
CLHC1-201ENST00000401408 ADGRD1Q6QNK2 874 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms