RNA–Protein interactions for RNA: ENST00000400183.6

USP25-204, Transcript of ubiquitin specific peptidase 25, humanhuman

TSL 1 (best) BASIC

Gene USP25, Length 5,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP25-204ENST00000400183 RTL9Q8NET4 1388 aa21.05■□□□□ 0.96
USP25-204ENST00000400183 PRPHP41219 470 aa21.05■□□□□ 0.96
USP25-204ENST00000400183 RNF113AO15541 343 aaKnown RBP21.05■□□□□ 0.96
USP25-204ENST00000400183 PHACTR2O75167 634 aa21.04■□□□□ 0.96
USP25-204ENST00000400183 LMAN1P49257 510 aa21.04■□□□□ 0.96
USP25-204ENST00000400183 SELENOOQ9BVL4 669 aa21.04■□□□□ 0.96
USP25-204ENST00000400183 DNAJC25Q9H1X3 360 aa21.04■□□□□ 0.96
USP25-204ENST00000400183 DNAI1Q9UI46 699 aa21.04■□□□□ 0.96
USP25-204ENST00000400183 PICALMQ13492 652 aa21.04■□□□□ 0.96
USP25-204ENST00000400183 ZNF830Q96NB3 372 aaPredicted RBP21.04■□□□□ 0.96
USP25-204ENST00000400183 MTHFSDQ2M296 383 aaKnown RBP21.04■□□□□ 0.96
USP25-204ENST00000400183 ACSBG1Q96GR2 724 aa21.04■□□□□ 0.96
USP25-204ENST00000400183 NYXQ9GZU5 481 aa21.04■□□□□ 0.96
USP25-204ENST00000400183 C16orf71Q8IYS4 520 aaPredicted RBP21.04■□□□□ 0.96
USP25-204ENST00000400183 DHX58Q96C10 678 aa21.04■□□□□ 0.96
USP25-204ENST00000400183 DCTPP1Q9H773 170 aa21.04■□□□□ 0.96
USP25-204ENST00000400183 POLKQ9UBT6 870 aa21.04■□□□□ 0.96
USP25-204ENST00000400183 TACC1O75410 805 aa21.03■□□□□ 0.96
USP25-204ENST00000400183 KRT79Q5XKE5 535 aa21.03■□□□□ 0.96
USP25-204ENST00000400183 RTL1A6NKG5 1358 aa21.03■□□□□ 0.96
USP25-204ENST00000400183 POLR3AO14802 1390 aaPredicted RBP21.03■□□□□ 0.96
USP25-204ENST00000400183 FLT4P35916 1363 aa21.03■□□□□ 0.96
USP25-204ENST00000400183 PLCG2P16885 1265 aa21.03■□□□□ 0.96
USP25-204ENST00000400183 UHRF1BP1LA0JNW5 1464 aa21.03■□□□□ 0.96
USP25-204ENST00000400183 TUBB4AP04350 444 aa21.02■□□□□ 0.96
USP25-204ENST00000400183 DZIP3Q86Y13 1208 aaKnown RBP21.02■□□□□ 0.96
USP25-204ENST00000400183 GTPBP4Q9BZE4 634 aaKnown RBP21.02■□□□□ 0.96
USP25-204ENST00000400183 DDB1Q16531 1140 aa21.02■□□□□ 0.96
USP25-204ENST00000400183 RNF216Q9NWF9 866 aaPredicted RBP21.02■□□□□ 0.96
USP25-204ENST00000400183 NUP160Q12769 1436 aa21.02■□□□□ 0.96
USP25-204ENST00000400183 NOLC1Q14978 699 aaKnown RBP eCLIP21.02■□□□□ 0.96
USP25-204ENST00000400183 PPP1R14CQ8TAE6 165 aa21.02■□□□□ 0.96
USP25-204ENST00000400183 ARFGAP3Q9NP61 516 aa21.02■□□□□ 0.96
USP25-204ENST00000400183 CEP85Q6P2H3 762 aa21.02■□□□□ 0.96
USP25-204ENST00000400183 SYT1P21579 422 aa21.02■□□□□ 0.95
USP25-204ENST00000400183 PPM1FP49593 454 aaPredicted RBP21.02■□□□□ 0.95
USP25-204ENST00000400183 TPTE2Q6XPS3 522 aa21.02■□□□□ 0.95
USP25-204ENST00000400183 IMPG2Q9BZV3 1241 aa21.01■□□□□ 0.95
USP25-204ENST00000400183 ZKSCAN5Q9Y2L8 839 aa21.01■□□□□ 0.95
USP25-204ENST00000400183 RRP36Q96EU6 259 aaKnown RBP21.01■□□□□ 0.95
USP25-204ENST00000400183 SPDYE3A6NKU9 549 aa21.01■□□□□ 0.95
USP25-204ENST00000400183 KRT83P78385 493 aa21.01■□□□□ 0.95
USP25-204ENST00000400183 TTC12Q9H892 705 aaPredicted RBP21.01■□□□□ 0.95
USP25-204ENST00000400183 SBNO2Q9Y2G9 1366 aa21.01■□□□□ 0.95
USP25-204ENST00000400183 IL2RBP14784 551 aa21.01■□□□□ 0.95
USP25-204ENST00000400183 SIRT1Q96EB6 747 aa21.01■□□□□ 0.95
USP25-204ENST00000400183 RASAL2Q9UJF2 1139 aa21.01■□□□□ 0.95
USP25-204ENST00000400183 VAMP4O75379 141 aa21■□□□□ 0.95
USP25-204ENST00000400183 FERP16591 822 aa21■□□□□ 0.95
USP25-204ENST00000400183 C6orf163Q5TEZ5 329 aa21■□□□□ 0.95
USP25-204ENST00000400183 PABPN1LA6NDY0 278 aaKnown RBP21■□□□□ 0.95
USP25-204ENST00000400183 PTGS1P23219 599 aa21■□□□□ 0.95
USP25-204ENST00000400183 CREB3L3Q68CJ9 461 aa21■□□□□ 0.95
USP25-204ENST00000400183 PPM1EQ8WY54 764 aa21■□□□□ 0.95
USP25-204ENST00000400183 TIGD1Q96MW7 591 aa21■□□□□ 0.95
USP25-204ENST00000400183 MCM9Q9NXL9 1143 aa21■□□□□ 0.95
USP25-204ENST00000400183 GPATCH8Q9UKJ3 1502 aaKnown RBP21■□□□□ 0.95
USP25-204ENST00000400183 RAD50Q92878 1312 aa21■□□□□ 0.95
USP25-204ENST00000400183 LMOD1P29536 600 aaPredicted RBP21■□□□□ 0.95
USP25-204ENST00000400183 DHX32Q7L7V1 743 aaKnown RBP21■□□□□ 0.95
USP25-204ENST00000400183 NFATC2IPQ8NCF5 419 aa21■□□□□ 0.95
USP25-204ENST00000400183 ZC3H12CQ9C0D7 883 aaKnown RBP21■□□□□ 0.95
USP25-204ENST00000400183 A0A1W2PRG0 241 aa21■□□□□ 0.95
USP25-204ENST00000400183 KRT2P35908 639 aa21■□□□□ 0.95
USP25-204ENST00000400183 AK2P54819 239 aa21■□□□□ 0.95
USP25-204ENST00000400183 CEP63Q96MT8 703 aa21■□□□□ 0.95
USP25-204ENST00000400183 PUS7Q96PZ0 661 aaKnown RBP21■□□□□ 0.95
USP25-204ENST00000400183 LMBR1Q8WVP7 490 aa20.99■□□□□ 0.95
USP25-204ENST00000400183 SRRTQ9BXP5 876 aaKnown RBP20.99■□□□□ 0.95
USP25-204ENST00000400183 MRVI1Q9Y6F6 885 aa20.99■□□□□ 0.95
USP25-204ENST00000400183 BICDL2A1A5D9 508 aa20.99■□□□□ 0.95
USP25-204ENST00000400183 TYRO3Q06418 890 aa20.99■□□□□ 0.95
USP25-204ENST00000400183 KIF5AQ12840 1032 aa20.99■□□□□ 0.95
USP25-204ENST00000400183 IRS4O14654 1257 aaPredicted RBP20.99■□□□□ 0.95
USP25-204ENST00000400183 BRAPQ7Z569 592 aa20.99■□□□□ 0.95
USP25-204ENST00000400183 TCHPQ9BT92 498 aa20.99■□□□□ 0.95
USP25-204ENST00000400183 KRT86O43790 486 aa20.99■□□□□ 0.95
USP25-204ENST00000400183 GNA11P29992 359 aa20.99■□□□□ 0.95
USP25-204ENST00000400183 CWF19L2Q2TBE0 894 aaKnown RBP20.99■□□□□ 0.95
USP25-204ENST00000400183 KRT222Q8N1A0 295 aa20.99■□□□□ 0.95
USP25-204ENST00000400183 CCDC77Q9BR77 488 aa20.99■□□□□ 0.95
USP25-204ENST00000400183 TNNI2P48788 182 aa20.98■□□□□ 0.95
USP25-204ENST00000400183 HS2ST1Q7LGA3 356 aa20.98■□□□□ 0.95
USP25-204ENST00000400183 LRRC59Q96AG4 307 aaKnown RBP20.98■□□□□ 0.95
USP25-204ENST00000400183 LRRC45Q96CN5 670 aa20.98■□□□□ 0.95
USP25-204ENST00000400183 APOBRQ0VD83 1088 aa20.98■□□□□ 0.95
USP25-204ENST00000400183 CCDC42Q96M95 316 aa20.98■□□□□ 0.95
USP25-204ENST00000400183 SOS1Q07889 1333 aaPredicted RBP20.98■□□□□ 0.95
USP25-204ENST00000400183 PTPDC1A2A3K4 754 aa20.98■□□□□ 0.95
USP25-204ENST00000400183 IQCGQ9H095 443 aaKnown RBP20.98■□□□□ 0.95
USP25-204ENST00000400183 B4DLN1 442 aa20.97■□□□□ 0.95
USP25-204ENST00000400183 MRPL12P52815 198 aaKnown RBP20.97■□□□□ 0.95
USP25-204ENST00000400183 MAP3K5Q99683 1374 aa20.97■□□□□ 0.95
USP25-204ENST00000400183 MAGEB6Q8N7X4 407 aa20.97■□□□□ 0.95
USP25-204ENST00000400183 SREK1Q8WXA9 508 aaKnown RBP20.97■□□□□ 0.95
USP25-204ENST00000400183 PARD3Q8TEW0 1356 aa20.97■□□□□ 0.95
USP25-204ENST00000400183 CTAGE9A4FU28 777 aa20.97■□□□□ 0.95
USP25-204ENST00000400183 DCAF5Q96JK2 942 aa20.97■□□□□ 0.95
USP25-204ENST00000400183 INTS4Q96HW7 963 aaKnown RBP20.97■□□□□ 0.95
USP25-204ENST00000400183 TFCP2Q12800 502 aa20.97■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 92 ms