RNA–Protein interactions for RNA: ENST00000399973.1

USP16-202, Transcript of ubiquitin specific peptidase 16, humanhuman

TSL 3

Gene USP16, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-202ENST00000399973 CNOT7Q9UIV1 285 aaKnown RBP10.57□□□□□ -0.72
USP16-202ENST00000399973 LEMD3Q9Y2U8 911 aa10.57□□□□□ -0.72
USP16-202ENST00000399973 POLR2AP24928 1970 aaKnown RBP10.57□□□□□ -0.72
USP16-202ENST00000399973 SNAP23O00161 211 aa10.56□□□□□ -0.72
USP16-202ENST00000399973 BCAR3O75815 825 aa10.56□□□□□ -0.72
USP16-202ENST00000399973 RPS12P25398 132 aaKnown RBP10.56□□□□□ -0.72
USP16-202ENST00000399973 RBM26Q5T8P6 1007 aaKnown RBP10.56□□□□□ -0.72
USP16-202ENST00000399973 TXNRD3Q86VQ6 643 aa10.56□□□□□ -0.72
USP16-202ENST00000399973 CNTROBQ8N137 903 aa10.56□□□□□ -0.72
USP16-202ENST00000399973 USP44Q9H0E7 712 aa10.56□□□□□ -0.72
USP16-202ENST00000399973 PASKQ96RG2 1323 aa10.56□□□□□ -0.72
USP16-202ENST00000399973 USP17L3A6NCW0 530 aa10.55□□□□□ -0.72
USP16-202ENST00000399973 USP17L4A6NCW7 530 aa10.55□□□□□ -0.72
USP16-202ENST00000399973 TRAF5O00463 557 aa10.55□□□□□ -0.72
USP16-202ENST00000399973 KIF4BQ2VIQ3 1234 aa10.55□□□□□ -0.72
USP16-202ENST00000399973 RABL6Q3YEC7 729 aaPredicted RBP10.55□□□□□ -0.72
USP16-202ENST00000399973 RSBN1LQ6PCB5 846 aaPredicted RBP10.55□□□□□ -0.72
USP16-202ENST00000399973 USP17L1Q7RTZ2 530 aa10.55□□□□□ -0.72
USP16-202ENST00000399973 SAMD7Q7Z3H4 446 aa10.55□□□□□ -0.72
USP16-202ENST00000399973 ZNF804AQ7Z570 1209 aa10.55□□□□□ -0.72
USP16-202ENST00000399973 PODNQ7Z5L7 613 aa10.55□□□□□ -0.72
USP16-202ENST00000399973 KLHDC4Q8TBB5 520 aa10.55□□□□□ -0.72
USP16-202ENST00000399973 CLUAP1Q96AJ1 413 aa10.55□□□□□ -0.72
USP16-202ENST00000399973 PUS3Q9BZE2 481 aaKnown RBP10.55□□□□□ -0.72
USP16-202ENST00000399973 COA1Q9GZY4 146 aa10.55□□□□□ -0.72
USP16-202ENST00000399973 MKRN1Q9UHC7 482 aaKnown RBP10.55□□□□□ -0.72
USP16-202ENST00000399973 TNNQ9UQP3 1299 aa10.55□□□□□ -0.72
USP16-202ENST00000399973 ZNF609O15014 1411 aa10.55□□□□□ -0.72
USP16-202ENST00000399973 IPO8O15397 1037 aaKnown RBP10.54□□□□□ -0.72
USP16-202ENST00000399973 ITGBL1O95965 494 aaPredicted RBP10.54□□□□□ -0.72
USP16-202ENST00000399973 TRIM27P14373 513 aa10.54□□□□□ -0.72
USP16-202ENST00000399973 BRPF1P55201 1214 aaPredicted RBP10.54□□□□□ -0.72
USP16-202ENST00000399973 FMR1Q06787 632 aaKnown RBP eCLIP10.54□□□□□ -0.72
USP16-202ENST00000399973 METTL24Q5JXM2 366 aa10.54□□□□□ -0.72
USP16-202ENST00000399973 DPF2Q92785 391 aa10.54□□□□□ -0.72
USP16-202ENST00000399973 KLRG1Q96E93 195 aa10.54□□□□□ -0.72
USP16-202ENST00000399973 MEIS3Q99687 375 aa10.54□□□□□ -0.72
USP16-202ENST00000399973 MXD3Q9BW11 206 aa10.54□□□□□ -0.72
USP16-202ENST00000399973 GLIS2Q9BZE0 524 aaPredicted RBP10.54□□□□□ -0.72
USP16-202ENST00000399973 ZNF408Q9H9D4 720 aa10.54□□□□□ -0.72
USP16-202ENST00000399973 CREBZFQ9NS37 354 aa10.54□□□□□ -0.72
USP16-202ENST00000399973 LRRFIP2Q9Y608 721 aaKnown RBP10.54□□□□□ -0.72
USP16-202ENST00000399973 TMEM88BA6NKF7 163 aa10.53□□□□□ -0.72
USP16-202ENST00000399973 EGFRP00533 1210 aa10.53□□□□□ -0.72
USP16-202ENST00000399973 VIL1P09327 827 aaKnown RBP10.53□□□□□ -0.72
USP16-202ENST00000399973 HIRAP54198 1017 aaPredicted RBP10.53□□□□□ -0.72
USP16-202ENST00000399973 GTF2IP78347 998 aa10.53□□□□□ -0.72
USP16-202ENST00000399973 LRRC24Q50LG9 513 aa10.53□□□□□ -0.72
USP16-202ENST00000399973 ATF7IPQ6VMQ6 1270 aa10.53□□□□□ -0.72
USP16-202ENST00000399973 AGBL3Q8NEM8 1001 aa10.53□□□□□ -0.72
USP16-202ENST00000399973 SIL1Q9H173 461 aa10.53□□□□□ -0.72
USP16-202ENST00000399973 GGA3Q9NZ52 723 aa10.53□□□□□ -0.72
USP16-202ENST00000399973 ABT1Q9ULW3 272 aaKnown RBP10.53□□□□□ -0.72
USP16-202ENST00000399973 JAG2Q9Y219 1238 aa10.53□□□□□ -0.72
USP16-202ENST00000399973 MROH5Q6ZUA9 1318 aa10.53□□□□□ -0.72
USP16-202ENST00000399973 USP17L8P0C7I0 530 aa10.52□□□□□ -0.73
USP16-202ENST00000399973 DACT2Q5SW24 774 aa10.52□□□□□ -0.73
USP16-202ENST00000399973 ZKSCAN2Q63HK3 967 aa10.52□□□□□ -0.73
USP16-202ENST00000399973 PAXIP1Q6ZW49 1069 aaPredicted RBP10.52□□□□□ -0.73
USP16-202ENST00000399973 FTSJ3Q8IY81 847 aaKnown RBP10.52□□□□□ -0.73
USP16-202ENST00000399973 DNAJC5GQ8N7S2 189 aa10.52□□□□□ -0.73
USP16-202ENST00000399973 ARHGAP45Q92619 1136 aa10.52□□□□□ -0.73
USP16-202ENST00000399973 CD209Q9NNX6 404 aa10.52□□□□□ -0.73
USP16-202ENST00000399973 ASTN2O75129 1339 aaPredicted RBP10.52□□□□□ -0.73
USP16-202ENST00000399973 MYO3BQ8WXR4 1341 aa10.52□□□□□ -0.73
USP16-202ENST00000399973 IRS2Q9Y4H2 1338 aa10.52□□□□□ -0.73
USP16-202ENST00000399973 THSD7BQ9C0I4 1608 aa10.51□□□□□ -0.73
USP16-202ENST00000399973 ADM5C9JUS6 153 aa10.51□□□□□ -0.73
USP16-202ENST00000399973 GNAI3P08754 354 aa10.51□□□□□ -0.73
USP16-202ENST00000399973 GYG1P46976 350 aa10.51□□□□□ -0.73
USP16-202ENST00000399973 GRM1Q13255 1194 aa10.51□□□□□ -0.73
USP16-202ENST00000399973 STRIP1Q5VSL9 837 aa10.51□□□□□ -0.73
USP16-202ENST00000399973 INTS3Q68E01 1043 aaKnown RBP10.51□□□□□ -0.73
USP16-202ENST00000399973 TTLL5Q6EMB2 1281 aa10.51□□□□□ -0.73
USP16-202ENST00000399973 KIAA0825Q8IV33 1275 aa10.51□□□□□ -0.73
USP16-202ENST00000399973 OGFOD1Q8N543 542 aa10.51□□□□□ -0.73
USP16-202ENST00000399973 DCPSQ96C86 337 aaKnown RBP10.51□□□□□ -0.73
USP16-202ENST00000399973 MYOZ2Q9NPC6 264 aa10.51□□□□□ -0.73
USP16-202ENST00000399973 HDAC5Q9UQL6 1122 aa10.51□□□□□ -0.73
USP16-202ENST00000399973 CNTNAP1P78357 1384 aa10.51□□□□□ -0.73
USP16-202ENST00000399973 F8W031 263 aaPredicted RBP10.5□□□□□ -0.73
USP16-202ENST00000399973 EYA2O00167 538 aa10.5□□□□□ -0.73
USP16-202ENST00000399973 SASH1O94885 1247 aa10.5□□□□□ -0.73
USP16-202ENST00000399973 CELF2O95319 508 aaKnown RBP10.5□□□□□ -0.73
USP16-202ENST00000399973 ANGEL2Q5VTE6 544 aaKnown RBP10.5□□□□□ -0.73
USP16-202ENST00000399973 C15orf52Q6ZUT6 534 aaKnown RBP10.5□□□□□ -0.73
USP16-202ENST00000399973 CDC37L1Q7L3B6 337 aa10.5□□□□□ -0.73
USP16-202ENST00000399973 KRT26Q7Z3Y9 468 aa10.5□□□□□ -0.73
USP16-202ENST00000399973 USP48Q86UV5 1035 aa10.5□□□□□ -0.73
USP16-202ENST00000399973 VPS37DQ86XT2 251 aa10.5□□□□□ -0.73
USP16-202ENST00000399973 TMEM57Q8N5G2 664 aa10.5□□□□□ -0.73
USP16-202ENST00000399973 ZC3H15Q8WU90 426 aaKnown RBP10.5□□□□□ -0.73
USP16-202ENST00000399973 IQSEC3Q9UPP2 1182 aaPredicted RBP10.5□□□□□ -0.73
USP16-202ENST00000399973 RIPOR2Q9Y4F9 1068 aa10.5□□□□□ -0.73
USP16-202ENST00000399973 FRAT2O75474 233 aaPredicted RBP10.49□□□□□ -0.73
USP16-202ENST00000399973 HIBADHP31937 336 aaKnown RBP10.49□□□□□ -0.73
USP16-202ENST00000399973 RFX5P48382 616 aaPredicted RBP10.49□□□□□ -0.73
USP16-202ENST00000399973 ZNF280AP59817 542 aaPredicted RBP10.49□□□□□ -0.73
USP16-202ENST00000399973 PTPN12Q05209 780 aaKnown RBP10.49□□□□□ -0.73
USP16-202ENST00000399973 UBE4AQ14139 1066 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms