RNA–Protein interactions for RNA: ENST00000399641.5

CACNA1C-217, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,511 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-217ENST00000399641 CAPZA3Q96KX2 299 aa12.61□□□□□ -0.39
CACNA1C-217ENST00000399641 RABEP2Q9H5N1 569 aa12.61□□□□□ -0.39
CACNA1C-217ENST00000399641 YEATS4O95619 227 aa12.61□□□□□ -0.39
CACNA1C-217ENST00000399641 SP4Q02446 784 aa12.61□□□□□ -0.39
CACNA1C-217ENST00000399641 CKAP4Q07065 602 aaKnown RBP12.61□□□□□ -0.39
CACNA1C-217ENST00000399641 GKAP1Q5VSY0 366 aaPredicted RBP12.61□□□□□ -0.39
CACNA1C-217ENST00000399641 BZW2Q9Y6E2 419 aaKnown RBP12.61□□□□□ -0.39
CACNA1C-217ENST00000399641 ZSCAN12O43309 604 aa12.61□□□□□ -0.39
CACNA1C-217ENST00000399641 TACC1O75410 805 aa12.61□□□□□ -0.39
CACNA1C-217ENST00000399641 BCAR3O75815 825 aa12.61□□□□□ -0.39
CACNA1C-217ENST00000399641 BLVRAP53004 296 aa12.61□□□□□ -0.39
CACNA1C-217ENST00000399641 CCDC129Q6ZRS4 1044 aa12.61□□□□□ -0.39
CACNA1C-217ENST00000399641 CCDC121Q6ZUS5 278 aa12.61□□□□□ -0.39
CACNA1C-217ENST00000399641 STMN2Q93045 179 aa12.61□□□□□ -0.39
CACNA1C-217ENST00000399641 NOB1Q9ULX3 412 aaKnown RBP12.61□□□□□ -0.39
CACNA1C-217ENST00000399641 CCDC196A0A1B0GTZ2 297 aa12.61□□□□□ -0.39
CACNA1C-217ENST00000399641 AAMPQ13685 434 aa12.61□□□□□ -0.39
CACNA1C-217ENST00000399641 ANKRD30BQ9BXX2 1392 aa12.61□□□□□ -0.39
CACNA1C-217ENST00000399641 MGEA5O60502 916 aa12.61□□□□□ -0.39
CACNA1C-217ENST00000399641 PDE6BP35913 854 aa12.61□□□□□ -0.39
CACNA1C-217ENST00000399641 TNRQ92752 1358 aa12.6□□□□□ -0.39
CACNA1C-217ENST00000399641 ZEB2O60315 1214 aa12.6□□□□□ -0.39
CACNA1C-217ENST00000399641 STMN1P16949 149 aa12.6□□□□□ -0.39
CACNA1C-217ENST00000399641 FAM47CQ5HY64 1035 aa12.6□□□□□ -0.39
CACNA1C-217ENST00000399641 C10orf67Q8IYJ2 551 aa12.6□□□□□ -0.39
CACNA1C-217ENST00000399641 SLC5A4Q9NY91 659 aa12.6□□□□□ -0.39
CACNA1C-217ENST00000399641 MX2P20592 715 aa12.6□□□□□ -0.39
CACNA1C-217ENST00000399641 XRCC6P12956 609 aaKnown RBP eCLIP12.6□□□□□ -0.39
CACNA1C-217ENST00000399641 SMARCC2Q8TAQ2 1214 aa12.6□□□□□ -0.39
CACNA1C-217ENST00000399641 DCPSQ96C86 337 aaKnown RBP12.6□□□□□ -0.39
CACNA1C-217ENST00000399641 ZC4H2Q9NQZ6 224 aa12.6□□□□□ -0.39
CACNA1C-217ENST00000399641 SLC12A7Q9Y666 1083 aa12.6□□□□□ -0.39
CACNA1C-217ENST00000399641 PDE3AQ14432 1141 aa12.6□□□□□ -0.39
CACNA1C-217ENST00000399641 GTF3C6Q969F1 213 aa12.6□□□□□ -0.39
CACNA1C-217ENST00000399641 IL2RBP14784 551 aa12.6□□□□□ -0.39
CACNA1C-217ENST00000399641 SFPQP23246 707 aaKnown RBP eCLIP12.6□□□□□ -0.39
CACNA1C-217ENST00000399641 SUPT20HQ8NEM7 779 aa12.6□□□□□ -0.39
CACNA1C-217ENST00000399641 IL1RAPL2Q9NP60 686 aa12.6□□□□□ -0.39
CACNA1C-217ENST00000399641 BLOC1S2Q6QNY1 142 aa12.59□□□□□ -0.39
CACNA1C-217ENST00000399641 MCM10Q7L590 875 aa12.59□□□□□ -0.39
CACNA1C-217ENST00000399641 TSR2Q969E8 191 aaKnown RBP12.59□□□□□ -0.39
CACNA1C-217ENST00000399641 CUX1P39880 1505 aa12.59□□□□□ -0.39
CACNA1C-217ENST00000399641 ATP5J2-PTCD1G3V325 749 aa12.59□□□□□ -0.39
CACNA1C-217ENST00000399641 TTC30BQ8N4P2 665 aa12.59□□□□□ -0.39
CACNA1C-217ENST00000399641 CNBD1Q8NA66 436 aa12.59□□□□□ -0.39
CACNA1C-217ENST00000399641 RNF34Q969K3 372 aa12.59□□□□□ -0.39
CACNA1C-217ENST00000399641 USH1CQ9Y6N9 552 aa12.59□□□□□ -0.39
CACNA1C-217ENST00000399641 SPECC1L-ADORA2AF8WAN1 911 aa12.59□□□□□ -0.39
CACNA1C-217ENST00000399641 IDEP14735 1019 aa12.59□□□□□ -0.39
CACNA1C-217ENST00000399641 PTGS1P23219 599 aa12.59□□□□□ -0.39
CACNA1C-217ENST00000399641 PPFIA1Q13136 1202 aa12.59□□□□□ -0.39
CACNA1C-217ENST00000399641 ZBTB21Q9ULJ3 1066 aa12.59□□□□□ -0.39
CACNA1C-217ENST00000399641 TTF1Q15361 905 aaPredicted RBP12.59□□□□□ -0.39
CACNA1C-217ENST00000399641 PRPHP41219 470 aa12.59□□□□□ -0.39
CACNA1C-217ENST00000399641 MVPQ14764 893 aaKnown RBP12.59□□□□□ -0.39
CACNA1C-217ENST00000399641 STX8Q9UNK0 236 aa12.59□□□□□ -0.39
CACNA1C-217ENST00000399641 NESP48681 1621 aa12.58□□□□□ -0.39
CACNA1C-217ENST00000399641 PCK1P35558 622 aa12.58□□□□□ -0.39
CACNA1C-217ENST00000399641 ATP2A3Q93084 1043 aa12.58□□□□□ -0.39
CACNA1C-217ENST00000399641 NACA2Q9H009 215 aa12.58□□□□□ -0.39
CACNA1C-217ENST00000399641 CSADQ9Y600 493 aa12.58□□□□□ -0.39
CACNA1C-217ENST00000399641 TSTA3Q13630 321 aaPredicted RBP12.58□□□□□ -0.4
CACNA1C-217ENST00000399641 ANKRD35Q8N283 1001 aa12.58□□□□□ -0.4
CACNA1C-217ENST00000399641 U3KPZ7 1027 aaPredicted RBP12.58□□□□□ -0.4
CACNA1C-217ENST00000399641 TEX14Q8IWB6 1497 aa12.58□□□□□ -0.4
CACNA1C-217ENST00000399641 TLDC2A0PJX2 215 aa12.58□□□□□ -0.4
CACNA1C-217ENST00000399641 ZNF213O14771 459 aa12.58□□□□□ -0.4
CACNA1C-217ENST00000399641 CASTP20810 708 aaKnown RBP12.58□□□□□ -0.4
CACNA1C-217ENST00000399641 HSP90AA5PQ58FG0 334 aa12.58□□□□□ -0.4
CACNA1C-217ENST00000399641 DZIP3Q86Y13 1208 aaKnown RBP12.58□□□□□ -0.4
CACNA1C-217ENST00000399641 ANKS4BQ8N8V4 417 aa12.58□□□□□ -0.4
CACNA1C-217ENST00000399641 IFIT3O14879 490 aaKnown RBP12.58□□□□□ -0.4
CACNA1C-217ENST00000399641 IQSEC3Q9UPP2 1182 aaPredicted RBP12.58□□□□□ -0.4
CACNA1C-217ENST00000399641 ZNF131P52739 623 aa12.58□□□□□ -0.4
CACNA1C-217ENST00000399641 IRAK4Q9NWZ3 460 aa12.57□□□□□ -0.4
CACNA1C-217ENST00000399641 BACH1O14867 736 aa12.57□□□□□ -0.4
CACNA1C-217ENST00000399641 STX6O43752 255 aa12.57□□□□□ -0.4
CACNA1C-217ENST00000399641 CALCOCO2Q13137 446 aa12.57□□□□□ -0.4
CACNA1C-217ENST00000399641 MAP7Q14244 749 aa12.57□□□□□ -0.4
CACNA1C-217ENST00000399641 CCDC83Q8IWF9 413 aa12.57□□□□□ -0.4
CACNA1C-217ENST00000399641 KIF18AQ8NI77 898 aa12.57□□□□□ -0.4
CACNA1C-217ENST00000399641 QTRT2Q9H974 415 aaKnown RBP12.57□□□□□ -0.4
CACNA1C-217ENST00000399641 IFT81Q8WYA0 676 aa12.57□□□□□ -0.4
CACNA1C-217ENST00000399641 TBC1D5Q92609 795 aa12.57□□□□□ -0.4
CACNA1C-217ENST00000399641 DUSP27Q5VZP5 1158 aa12.57□□□□□ -0.4
CACNA1C-217ENST00000399641 CALML4Q96GE6 196 aa12.57□□□□□ -0.4
CACNA1C-217ENST00000399641 CC2D2AQ9P2K1 1620 aa12.57□□□□□ -0.4
CACNA1C-217ENST00000399641 KRT32Q14532 448 aa12.57□□□□□ -0.4
CACNA1C-217ENST00000399641 RINLQ6ZS11 566 aa12.57□□□□□ -0.4
CACNA1C-217ENST00000399641 RMDN2Q96LZ7 410 aa12.57□□□□□ -0.4
CACNA1C-217ENST00000399641 MAK16Q9BXY0 300 aaKnown RBP12.57□□□□□ -0.4
CACNA1C-217ENST00000399641 SH2D4AQ9H788 454 aa12.57□□□□□ -0.4
CACNA1C-217ENST00000399641 GINS2Q9Y248 185 aa12.57□□□□□ -0.4
CACNA1C-217ENST00000399641 DENND4BO75064 1496 aaPredicted RBP12.57□□□□□ -0.4
CACNA1C-217ENST00000399641 MAP3K11Q16584 847 aa12.56□□□□□ -0.4
CACNA1C-217ENST00000399641 RNF217Q8TC41 542 aa12.56□□□□□ -0.4
CACNA1C-217ENST00000399641 ADGRL1O94910 1474 aa12.56□□□□□ -0.4
CACNA1C-217ENST00000399641 TBCAO75347 108 aaKnown RBP12.56□□□□□ -0.4
CACNA1C-217ENST00000399641 CCDC122Q5T0U0 273 aa12.56□□□□□ -0.4
CACNA1C-217ENST00000399641 TTLL3Q9Y4R7 772 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms