RNA–Protein interactions for RNA: ENST00000399256.4

APOB-202, Transcript of apolipoprotein B, humanhuman

TSL 1 (best) BASIC

Gene APOB, Length 3,128 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-202ENST00000399256 ZNF396Q96N95 335 aaPredicted RBP16.32■□□□□ 0.2
APOB-202ENST00000399256 XPO4Q9C0E2 1151 aaKnown RBP16.32■□□□□ 0.2
APOB-202ENST00000399256 NAT10Q9H0A0 1025 aaKnown RBP16.32■□□□□ 0.2
APOB-202ENST00000399256 IFNKQ9P0W0 207 aa16.32■□□□□ 0.2
APOB-202ENST00000399256 U3KPZ7 1027 aaPredicted RBP16.32■□□□□ 0.2
APOB-202ENST00000399256 A0A1B0GVL5 298 aa16.31■□□□□ 0.2
APOB-202ENST00000399256 GTF2E1P29083 439 aaPredicted RBP16.31■□□□□ 0.2
APOB-202ENST00000399256 LRRC59Q96AG4 307 aaKnown RBP16.31■□□□□ 0.2
APOB-202ENST00000399256 FMNL2Q96PY5 1086 aa16.31■□□□□ 0.2
APOB-202ENST00000399256 OSBPL5Q9H0X9 879 aaPredicted RBP16.31■□□□□ 0.2
APOB-202ENST00000399256 DBNLQ9UJU6 430 aaKnown RBP16.31■□□□□ 0.2
APOB-202ENST00000399256 DPCR1Q3MIW9 517 aa16.31■□□□□ 0.2
APOB-202ENST00000399256 EPHA10Q5JZY3 1008 aa16.31■□□□□ 0.2
APOB-202ENST00000399256 ILDR1Q86SU0 546 aaPredicted RBP16.3■□□□□ 0.2
APOB-202ENST00000399256 CADPS2Q86UW7 1296 aa16.3■□□□□ 0.2
APOB-202ENST00000399256 LLPHQ9BRT6 129 aaKnown RBP16.3■□□□□ 0.2
APOB-202ENST00000399256 KCND1Q9NSA2 647 aa16.3■□□□□ 0.2
APOB-202ENST00000399256 H2AFXP16104 143 aaPredicted RBP16.3■□□□□ 0.2
APOB-202ENST00000399256 CLCN6P51797 869 aa16.3■□□□□ 0.2
APOB-202ENST00000399256 AKAP4Q5JQC9 854 aa16.3■□□□□ 0.2
APOB-202ENST00000399256 DDX46Q7L014 1031 aaKnown RBP16.3■□□□□ 0.2
APOB-202ENST00000399256 NOL10Q9BSC4 688 aaKnown RBP16.3■□□□□ 0.2
APOB-202ENST00000399256 L2HGDHQ9H9P8 463 aa16.3■□□□□ 0.2
APOB-202ENST00000399256 TRPM3Q9HCF6 1732 aaPredicted RBP16.3■□□□□ 0.2
APOB-202ENST00000399256 PCDHA7Q9UN72 937 aa16.3■□□□□ 0.2
APOB-202ENST00000399256 BIN1O00499 593 aa16.3■□□□□ 0.2
APOB-202ENST00000399256 IGKV5-2P06315 115 aa16.3■□□□□ 0.2
APOB-202ENST00000399256 PSME1Q06323 249 aa16.3■□□□□ 0.2
APOB-202ENST00000399256 BMS1Q14692 1282 aaKnown RBP16.3■□□□□ 0.2
APOB-202ENST00000399256 SFPQP23246 707 aaKnown RBP eCLIP16.29■□□□□ 0.2
APOB-202ENST00000399256 ZRSR1Q15695 479 aaKnown RBP16.29■□□□□ 0.2
APOB-202ENST00000399256 FMR1NBQ8N0W7 255 aaPredicted RBP16.29■□□□□ 0.2
APOB-202ENST00000399256 MRPS27Q92552 414 aaKnown RBP16.29■□□□□ 0.2
APOB-202ENST00000399256 IMPACTQ9P2X3 320 aa16.29■□□□□ 0.2
APOB-202ENST00000399256 UTYO14607 1347 aa16.29■□□□□ 0.2
APOB-202ENST00000399256 RNMTO43148 476 aaKnown RBP16.29■□□□□ 0.2
APOB-202ENST00000399256 NDUFA8P51970 172 aa16.29■□□□□ 0.2
APOB-202ENST00000399256 TFCP2Q12800 502 aa16.29■□□□□ 0.2
APOB-202ENST00000399256 ARHGAP29Q52LW3 1261 aa16.29■□□□□ 0.2
APOB-202ENST00000399256 RIC3Q7Z5B4 369 aa16.29■□□□□ 0.2
APOB-202ENST00000399256 FHOD1Q9Y613 1164 aa16.29■□□□□ 0.2
APOB-202ENST00000399256 ATP5JP18859 108 aa16.28■□□□□ 0.2
APOB-202ENST00000399256 MCMDC2Q4G0Z9 681 aa16.28■□□□□ 0.2
APOB-202ENST00000399256 CHST3Q7LGC8 479 aa16.28■□□□□ 0.2
APOB-202ENST00000399256 TIGD1Q96MW7 591 aa16.28■□□□□ 0.2
APOB-202ENST00000399256 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.28■□□□□ 0.24e-37■□□□□ 8.2
APOB-202ENST00000399256 A0A0G2JLW4 131 aa16.28■□□□□ 0.2
APOB-202ENST00000399256 DDX58O95786 925 aaKnown RBP16.28■□□□□ 0.2
APOB-202ENST00000399256 IRX5P78411 483 aaPredicted RBP16.28■□□□□ 0.2
APOB-202ENST00000399256 HOMER1Q86YM7 354 aa16.28■□□□□ 0.2
APOB-202ENST00000399256 CCDC150Q8NCX0 1101 aa16.28■□□□□ 0.2
APOB-202ENST00000399256 MYH15Q9Y2K3 1946 aa16.28■□□□□ 0.2
APOB-202ENST00000399256 TNNI3KQ59H18 835 aa16.28■□□□□ 0.2
APOB-202ENST00000399256 DHX32Q7L7V1 743 aaKnown RBP16.28■□□□□ 0.2
APOB-202ENST00000399256 IP6K1Q92551 441 aa16.28■□□□□ 0.2
APOB-202ENST00000399256 FPGT-TNNI3KV9GXZ4 949 aa16.28■□□□□ 0.2
APOB-202ENST00000399256 CCDC93Q567U6 631 aa16.27■□□□□ 0.2
APOB-202ENST00000399256 OTUD7BQ6GQQ9 843 aa16.27■□□□□ 0.2
APOB-202ENST00000399256 DBNDD2Q9BQY9 259 aa16.27■□□□□ 0.2
APOB-202ENST00000399256 MYL6BP14649 208 aa16.27■□□□□ 0.19
APOB-202ENST00000399256 C1orf141Q5JVX7 400 aa16.27■□□□□ 0.19
APOB-202ENST00000399256 KIAA1468Q9P260 1216 aa16.27■□□□□ 0.19
APOB-202ENST00000399256 PNMA6AP0CW24 399 aaPredicted RBP16.26■□□□□ 0.19
APOB-202ENST00000399256 PLEKHO1Q53GL0 409 aaPredicted RBP16.26■□□□□ 0.19
APOB-202ENST00000399256 ISM2Q6H9L7 571 aa16.26■□□□□ 0.19
APOB-202ENST00000399256 DNAI1Q9UI46 699 aa16.26■□□□□ 0.19
APOB-202ENST00000399256 PSDA5PKW4 1024 aaPredicted RBP16.26■□□□□ 0.19
APOB-202ENST00000399256 SF3A1Q15459 793 aaKnown RBP16.26■□□□□ 0.19
APOB-202ENST00000399256 PXDNQ92626 1479 aa16.25■□□□□ 0.19
APOB-202ENST00000399256 MYD88Q99836 296 aa16.25■□□□□ 0.19
APOB-202ENST00000399256 CLIC4Q9Y696 253 aa16.25■□□□□ 0.19
APOB-202ENST00000399256 NCAPD2Q15021 1401 aa16.25■□□□□ 0.19
APOB-202ENST00000399256 PLA2G4AP47712 749 aa16.25■□□□□ 0.19
APOB-202ENST00000399256 TRERF1Q96PN7 1200 aa16.25■□□□□ 0.19
APOB-202ENST00000399256 NEURL1BA8MQ27 555 aa16.25■□□□□ 0.19
APOB-202ENST00000399256 POLR3DP05423 398 aaPredicted RBP16.25■□□□□ 0.19
APOB-202ENST00000399256 LMOD1P29536 600 aaPredicted RBP16.25■□□□□ 0.19
APOB-202ENST00000399256 STK38Q15208 465 aa16.25■□□□□ 0.19
APOB-202ENST00000399256 ATL3Q6DD88 541 aa16.25■□□□□ 0.19
APOB-202ENST00000399256 ADALQ6DHV7 355 aa16.25■□□□□ 0.19
APOB-202ENST00000399256 DDX21Q9NR30 783 aaKnown RBP eCLIP16.25■□□□□ 0.19
APOB-202ENST00000399256 CALCOCO1Q9P1Z2 691 aa16.25■□□□□ 0.19
APOB-202ENST00000399256 HMGB1P09429 215 aaKnown RBP16.24■□□□□ 0.19
APOB-202ENST00000399256 SALL1Q9NSC2 1324 aa16.24■□□□□ 0.19
APOB-202ENST00000399256 LTN1O94822 1766 aa16.24■□□□□ 0.19
APOB-202ENST00000399256 CARMIL3Q8ND23 1372 aa16.24■□□□□ 0.19
APOB-202ENST00000399256 VGLL3A8MV65 326 aa16.24■□□□□ 0.19
APOB-202ENST00000399256 CDK11BP21127 795 aaKnown RBP16.24■□□□□ 0.19
APOB-202ENST00000399256 NEXNQ0ZGT2 675 aa16.24■□□□□ 0.19
APOB-202ENST00000399256 GCKRQ14397 625 aa16.24■□□□□ 0.19
APOB-202ENST00000399256 PDIA6Q15084 440 aa16.24■□□□□ 0.19
APOB-202ENST00000399256 KRT28Q7Z3Y7 464 aa16.24■□□□□ 0.19
APOB-202ENST00000399256 POLR3GO15318 223 aaPredicted RBP16.23■□□□□ 0.19
APOB-202ENST00000399256 NRDCO43847 1150 aa16.23■□□□□ 0.19
APOB-202ENST00000399256 PDIA3P30101 505 aaKnown RBP16.23■□□□□ 0.19
APOB-202ENST00000399256 CYP2C19P33261 490 aa16.23■□□□□ 0.19
APOB-202ENST00000399256 UBXN4Q92575 508 aa16.23■□□□□ 0.19
APOB-202ENST00000399256 RTEL1Q9NZ71 1219 aa16.23■□□□□ 0.19
APOB-202ENST00000399256 MRC1P22897 1456 aa16.23■□□□□ 0.19
APOB-202ENST00000399256 ALS2Q96Q42 1657 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms