RNA–Protein interactions for RNA: ENST00000398868.7

ATL3-201, Transcript of atlastin GTPase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ATL3, Length 7,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-201ENST00000398868 MRRFQ96E11 262 aaKnown RBP10.63□□□□□ -0.71
ATL3-201ENST00000398868 SELENOSQ9BQE4 189 aa10.63□□□□□ -0.71
ATL3-201ENST00000398868 POLA1P09884 1462 aaPredicted RBP10.63□□□□□ -0.71
ATL3-201ENST00000398868 KIF2AO00139 706 aaPredicted RBP10.63□□□□□ -0.71
ATL3-201ENST00000398868 TFCP2Q12800 502 aa10.63□□□□□ -0.71
ATL3-201ENST00000398868 SPECC1LQ69YQ0 1117 aa10.63□□□□□ -0.71
ATL3-201ENST00000398868 ZSCAN31Q96LW9 406 aaPredicted RBP10.63□□□□□ -0.71
ATL3-201ENST00000398868 ORAI2Q96SN7 254 aa10.63□□□□□ -0.71
ATL3-201ENST00000398868 DNAI1Q9UI46 699 aa10.63□□□□□ -0.71
ATL3-201ENST00000398868 PRIM1P49642 420 aaKnown RBP10.63□□□□□ -0.71
ATL3-201ENST00000398868 STX17P56962 302 aa10.63□□□□□ -0.71
ATL3-201ENST00000398868 NOLC1Q14978 699 aaKnown RBP eCLIP10.63□□□□□ -0.71
ATL3-201ENST00000398868 Q6ZUG5 572 aa10.63□□□□□ -0.71
ATL3-201ENST00000398868 CERS3Q8IU89 383 aa10.63□□□□□ -0.71
ATL3-201ENST00000398868 EXOC1Q9NV70 894 aa10.63□□□□□ -0.71
ATL3-201ENST00000398868 USP21Q9UK80 565 aa10.63□□□□□ -0.71
ATL3-201ENST00000398868 STAT6P42226 847 aa10.63□□□□□ -0.71
ATL3-201ENST00000398868 C8orf58Q8NAV2 365 aa10.63□□□□□ -0.71
ATL3-201ENST00000398868 TRIM47Q96LD4 638 aa10.63□□□□□ -0.71
ATL3-201ENST00000398868 IFT140Q96RY7 1462 aa10.63□□□□□ -0.71
ATL3-201ENST00000398868 PAGR1Q9BTK6 254 aa10.62□□□□□ -0.71
ATL3-201ENST00000398868 WDR7Q9Y4E6 1490 aa10.62□□□□□ -0.71
ATL3-201ENST00000398868 LDHCP07864 332 aa10.62□□□□□ -0.71
ATL3-201ENST00000398868 KRT9P35527 623 aa10.62□□□□□ -0.71
ATL3-201ENST00000398868 CEP112Q8N8E3 955 aa10.62□□□□□ -0.71
ATL3-201ENST00000398868 NCOA7Q8NI08 942 aa10.62□□□□□ -0.71
ATL3-201ENST00000398868 TROQ12816 1431 aaPredicted RBP10.62□□□□□ -0.71
ATL3-201ENST00000398868 CLSTN2Q9H4D0 955 aa10.62□□□□□ -0.71
ATL3-201ENST00000398868 PHAXQ9H814 394 aaKnown RBP10.62□□□□□ -0.71
ATL3-201ENST00000398868 STK32BQ9NY57 414 aa10.62□□□□□ -0.71
ATL3-201ENST00000398868 PABPN1LA6NDY0 278 aaKnown RBP10.62□□□□□ -0.71
ATL3-201ENST00000398868 CPA1P15085 419 aa10.62□□□□□ -0.71
ATL3-201ENST00000398868 CETN2P41208 172 aa10.62□□□□□ -0.71
ATL3-201ENST00000398868 FAM47CQ5HY64 1035 aa10.62□□□□□ -0.71
ATL3-201ENST00000398868 TPTE2Q6XPS3 522 aa10.62□□□□□ -0.71
ATL3-201ENST00000398868 DHX58Q96C10 678 aa10.62□□□□□ -0.71
ATL3-201ENST00000398868 ALG1Q9BT22 464 aa10.62□□□□□ -0.71
ATL3-201ENST00000398868 PDE1CQ14123 709 aaPredicted RBP10.62□□□□□ -0.71
ATL3-201ENST00000398868 RRAGBQ5VZM2 374 aa10.62□□□□□ -0.71
ATL3-201ENST00000398868 TBC1D9Q6ZT07 1266 aa10.62□□□□□ -0.71
ATL3-201ENST00000398868 LARGE2Q8N3Y3 721 aa10.62□□□□□ -0.71
ATL3-201ENST00000398868 AATFQ9NY61 560 aaKnown RBP eCLIP10.62□□□□□ -0.71
ATL3-201ENST00000398868 RPGRIP1LQ68CZ1 1315 aa10.61□□□□□ -0.71
ATL3-201ENST00000398868 XRCC6P12956 609 aaKnown RBP eCLIP10.61□□□□□ -0.71
ATL3-201ENST00000398868 DOK7Q18PE1 504 aa10.61□□□□□ -0.71
ATL3-201ENST00000398868 EVI5LQ96CN4 794 aa10.61□□□□□ -0.71
ATL3-201ENST00000398868 PICK1Q9NRD5 415 aa10.61□□□□□ -0.71
ATL3-201ENST00000398868 PRDM1O75626 825 aa10.61□□□□□ -0.71
ATL3-201ENST00000398868 IFRD2Q12894 506 aaPredicted RBP10.61□□□□□ -0.71
ATL3-201ENST00000398868 CAMSAP2Q08AD1 1489 aa10.61□□□□□ -0.71
ATL3-201ENST00000398868 IGHDP01880 384 aa10.61□□□□□ -0.71
ATL3-201ENST00000398868 RHOXF2BP0C7M4 288 aa10.61□□□□□ -0.71
ATL3-201ENST00000398868 TTF1Q15361 905 aaPredicted RBP10.61□□□□□ -0.71
ATL3-201ENST00000398868 MTHFSDQ2M296 383 aaKnown RBP10.61□□□□□ -0.71
ATL3-201ENST00000398868 CCDC50Q8IVM0 306 aa10.61□□□□□ -0.71
ATL3-201ENST00000398868 RHOXF2Q9BQY4 288 aa10.61□□□□□ -0.71
ATL3-201ENST00000398868 APOBRQ0VD83 1088 aa10.61□□□□□ -0.71
ATL3-201ENST00000398868 BICC1Q9H694 974 aaKnown RBP10.61□□□□□ -0.71
ATL3-201ENST00000398868 SPDYE3A6NKU9 549 aa10.61□□□□□ -0.71
ATL3-201ENST00000398868 STX6O43752 255 aa10.61□□□□□ -0.71
ATL3-201ENST00000398868 USO1O60763 962 aaKnown RBP10.61□□□□□ -0.71
ATL3-201ENST00000398868 ABL1P00519 1130 aa10.61□□□□□ -0.71
ATL3-201ENST00000398868 TIMM10P62072 90 aa10.61□□□□□ -0.71
ATL3-201ENST00000398868 GBP6Q6ZN66 633 aa10.61□□□□□ -0.71
ATL3-201ENST00000398868 ARFGAP3Q9NP61 516 aa10.61□□□□□ -0.71
ATL3-201ENST00000398868 MAPK8IP1Q9UQF2 711 aa10.61□□□□□ -0.71
ATL3-201ENST00000398868 PPIP5K1Q6PFW1 1433 aa10.61□□□□□ -0.71
ATL3-201ENST00000398868 LDHBP07195 334 aaKnown RBP10.6□□□□□ -0.71
ATL3-201ENST00000398868 DCAF17Q5H9S7 520 aaPredicted RBP10.6□□□□□ -0.71
ATL3-201ENST00000398868 CNBD1Q8NA66 436 aa10.6□□□□□ -0.71
ATL3-201ENST00000398868 PPP1R14CQ8TAE6 165 aa10.6□□□□□ -0.71
ATL3-201ENST00000398868 CCDC94Q9BW85 323 aaPredicted RBP10.6□□□□□ -0.71
ATL3-201ENST00000398868 DNAI2Q9GZS0 605 aa10.6□□□□□ -0.71
ATL3-201ENST00000398868 ECHDC1Q9NTX5 307 aa10.6□□□□□ -0.71
ATL3-201ENST00000398868 TBC1D7Q9P0N9 293 aa10.6□□□□□ -0.71
ATL3-201ENST00000398868 A1BGP04217 495 aa10.6□□□□□ -0.71
ATL3-201ENST00000398868 GSTO1P78417 241 aa10.6□□□□□ -0.71
ATL3-201ENST00000398868 RTN1Q16799 776 aa10.6□□□□□ -0.71
ATL3-201ENST00000398868 MPHOSPH6Q99547 160 aaKnown RBP10.6□□□□□ -0.71
ATL3-201ENST00000398868 CEP83Q9Y592 693 aa10.6□□□□□ -0.71
ATL3-201ENST00000398868 KSR1Q8IVT5 923 aa10.6□□□□□ -0.71
ATL3-201ENST00000398868 EHBP1L1Q8N3D4 1523 aa10.6□□□□□ -0.71
ATL3-201ENST00000398868 DISP3Q9P2K9 1392 aa10.6□□□□□ -0.71
ATL3-201ENST00000398868 RASA3Q14644 834 aa10.6□□□□□ -0.71
ATL3-201ENST00000398868 KARSQ15046 597 aaKnown RBP10.6□□□□□ -0.71
ATL3-201ENST00000398868 CFAP58Q5T655 872 aa10.6□□□□□ -0.71
ATL3-201ENST00000398868 ZBTB43O43298 467 aa10.6□□□□□ -0.71
ATL3-201ENST00000398868 TBC1D10BQ4KMP7 808 aaPredicted RBP10.6□□□□□ -0.71
ATL3-201ENST00000398868 GRIPAP1Q4V328 841 aa10.6□□□□□ -0.71
ATL3-201ENST00000398868 C6orf163Q5TEZ5 329 aa10.6□□□□□ -0.71
ATL3-201ENST00000398868 STAC3Q96MF2 364 aa10.6□□□□□ -0.71
ATL3-201ENST00000398868 ATF5Q9Y2D1 282 aaPredicted RBP10.6□□□□□ -0.71
ATL3-201ENST00000398868 YEATS4O95619 227 aa10.6□□□□□ -0.71
ATL3-201ENST00000398868 ANO6Q4KMQ2 910 aa10.6□□□□□ -0.71
ATL3-201ENST00000398868 SSX2IPQ9Y2D8 614 aa10.6□□□□□ -0.71
ATL3-201ENST00000398868 KRT5P13647 590 aa10.59□□□□□ -0.71
ATL3-201ENST00000398868 U2AF2P26368 475 aaKnown RBP eCLIP10.59□□□□□ -0.71
ATL3-201ENST00000398868 CCDC121Q6ZUS5 278 aa10.59□□□□□ -0.71
ATL3-201ENST00000398868 CNPY2Q9Y2B0 182 aa10.59□□□□□ -0.71
ATL3-201ENST00000398868 TTLL3Q9Y4R7 772 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms