RNA–Protein interactions for RNA: ENST00000398510.7

CHD9-202, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best) BASIC

Gene CHD9, Length 11,337 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-202ENST00000398510 AGLP35573 1532 aa3.11□□□□□ -1.91
CHD9-202ENST00000398510 NEXMIFQ5QGS0 1516 aa3.11□□□□□ -1.91
CHD9-202ENST00000398510 STX6O43752 255 aa3.11□□□□□ -1.91
CHD9-202ENST00000398510 SRGAP2BP0DMP2 458 aa3.11□□□□□ -1.91
CHD9-202ENST00000398510 CCDC125Q86Z20 511 aa3.11□□□□□ -1.91
CHD9-202ENST00000398510 ARHGEF10LQ9HCE6 1279 aa3.11□□□□□ -1.91
CHD9-202ENST00000398510 ZMYM3Q14202 1370 aa3.11□□□□□ -1.91
CHD9-202ENST00000398510 DEPDC5O75140 1603 aa3.11□□□□□ -1.91
CHD9-202ENST00000398510 NEFHP12036 1026 aa3.11□□□□□ -1.91
CHD9-202ENST00000398510 ATP5DP30049 168 aa3.11□□□□□ -1.91
CHD9-202ENST00000398510 SPECC1LQ69YQ0 1117 aa3.11□□□□□ -1.91
CHD9-202ENST00000398510 ZNF449Q6P9G9 518 aa3.11□□□□□ -1.91
CHD9-202ENST00000398510 CROCCP2Q86T23 111 aa3.11□□□□□ -1.91
CHD9-202ENST00000398510 PDCL2Q8N4E4 241 aa3.11□□□□□ -1.91
CHD9-202ENST00000398510 CCDC110Q8TBZ0 833 aa3.11□□□□□ -1.91
CHD9-202ENST00000398510 COMMD10Q9Y6G5 202 aa3.11□□□□□ -1.91
CHD9-202ENST00000398510 DDX49Q9Y6V7 483 aaKnown RBP3.11□□□□□ -1.91
CHD9-202ENST00000398510 INSRP06213 1382 aa3.11□□□□□ -1.91
CHD9-202ENST00000398510 CEP170BQ9Y4F5 1589 aaPredicted RBP3.11□□□□□ -1.91
CHD9-202ENST00000398510 CASZ1Q86V15 1759 aa3.11□□□□□ -1.91
CHD9-202ENST00000398510 OVOS2A0A0J9YW53 1432 aa3.11□□□□□ -1.91
CHD9-202ENST00000398510 OVOS2Q6IE36 1432 aa3.11□□□□□ -1.91
CHD9-202ENST00000398510 SMC1AQ14683 1233 aaKnown RBP3.11□□□□□ -1.91
CHD9-202ENST00000398510 TBC1D22AQ8WUA7 517 aa3.11□□□□□ -1.91
CHD9-202ENST00000398510 NOX5Q96PH1 765 aa3.11□□□□□ -1.91
CHD9-202ENST00000398510 RAB3IPQ96QF0 476 aaPredicted RBP3.11□□□□□ -1.91
CHD9-202ENST00000398510 IWS1Q96ST2 819 aa3.11□□□□□ -1.91
CHD9-202ENST00000398510 JPH2Q9BR39 696 aaPredicted RBP3.11□□□□□ -1.91
CHD9-202ENST00000398510 TRPV6Q9H1D0 765 aa3.11□□□□□ -1.91
CHD9-202ENST00000398510 BCORL1Q5H9F3 1711 aa3.11□□□□□ -1.91
CHD9-202ENST00000398510 NBPF7P0C2Y1 421 aaPredicted RBP3.11□□□□□ -1.91
CHD9-202ENST00000398510 COPB2P35606 906 aa3.11□□□□□ -1.91
CHD9-202ENST00000398510 C10orf67Q8IYJ2 551 aa3.11□□□□□ -1.91
CHD9-202ENST00000398510 SLC12A7Q9Y666 1083 aa3.11□□□□□ -1.91
CHD9-202ENST00000398510 DDX60Q8IY21 1712 aaKnown RBP3.11□□□□□ -1.91
CHD9-202ENST00000398510 DLC1Q96QB1 1528 aa3.11□□□□□ -1.91
CHD9-202ENST00000398510 GMNNO75496 209 aa3.11□□□□□ -1.91
CHD9-202ENST00000398510 CCNA1P78396 465 aa3.11□□□□□ -1.91
CHD9-202ENST00000398510 STK38Q15208 465 aa3.11□□□□□ -1.91
CHD9-202ENST00000398510 NONOQ15233 471 aaKnown RBP eCLIP3.11□□□□□ -1.91
CHD9-202ENST00000398510 TPTE2Q6XPS3 522 aa3.11□□□□□ -1.91
CHD9-202ENST00000398510 MICALCLQ6ZW33 695 aa3.11□□□□□ -1.91
CHD9-202ENST00000398510 SETDB2Q96T68 719 aa3.11□□□□□ -1.91
CHD9-202ENST00000398510 VPS37BQ9H9H4 285 aa3.11□□□□□ -1.91
CHD9-202ENST00000398510 AS3MTQ9HBK9 375 aa3.11□□□□□ -1.91
CHD9-202ENST00000398510 CCPG1Q9ULG6 757 aa3.11□□□□□ -1.91
CHD9-202ENST00000398510 JRKLQ9Y4A0 524 aa3.11□□□□□ -1.91
CHD9-202ENST00000398510 LRRC7Q96NW7 1537 aa3.1□□□□□ -1.91
CHD9-202ENST00000398510 TULP4Q9NRJ4 1543 aa3.1□□□□□ -1.91
CHD9-202ENST00000398510 NUTM2BA6NNL0 878 aaPredicted RBP3.1□□□□□ -1.91
CHD9-202ENST00000398510 NUTM2EB1AL46 878 aaPredicted RBP3.1□□□□□ -1.91
CHD9-202ENST00000398510 BAG6P46379 1132 aa3.1□□□□□ -1.91
CHD9-202ENST00000398510 ERCC6LQ2NKX8 1250 aa3.1□□□□□ -1.91
CHD9-202ENST00000398510 GPATCH4Q5T3I0 446 aaKnown RBP3.1□□□□□ -1.91
CHD9-202ENST00000398510 NUTM2DQ5VT03 806 aaPredicted RBP3.1□□□□□ -1.91
CHD9-202ENST00000398510 GBP6Q6ZN66 633 aa3.1□□□□□ -1.91
CHD9-202ENST00000398510 NUTM2AQ8IVF1 878 aaPredicted RBP3.1□□□□□ -1.91
CHD9-202ENST00000398510 IPO4Q8TEX9 1081 aaKnown RBP3.1□□□□□ -1.91
CHD9-202ENST00000398510 TAF4BQ92750 862 aa3.1□□□□□ -1.91
CHD9-202ENST00000398510 KIF1BPQ96EK5 621 aa3.1□□□□□ -1.91
CHD9-202ENST00000398510 LTV1Q96GA3 475 aaPredicted RBP3.1□□□□□ -1.91
CHD9-202ENST00000398510 KIF2CQ99661 725 aa3.1□□□□□ -1.91
CHD9-202ENST00000398510 NUP153P49790 1475 aaKnown RBP3.1□□□□□ -1.91
CHD9-202ENST00000398510 COL17A1Q9UMD9 1497 aaPredicted RBP3.1□□□□□ -1.91
CHD9-202ENST00000398510 PHLPP1O60346 1717 aa3.1□□□□□ -1.91
CHD9-202ENST00000398510 RICTORQ6R327 1708 aa3.1□□□□□ -1.91
CHD9-202ENST00000398510 UQCRHLA0A096LP55 91 aa3.1□□□□□ -1.91
CHD9-202ENST00000398510 MAP4K4O95819 1239 aaPredicted RBP3.1□□□□□ -1.91
CHD9-202ENST00000398510 KRT83P78385 493 aa3.1□□□□□ -1.91
CHD9-202ENST00000398510 GSDMBQ8TAX9 411 aa3.1□□□□□ -1.91
CHD9-202ENST00000398510 IQCGQ9H095 443 aaKnown RBP3.1□□□□□ -1.91
CHD9-202ENST00000398510 PLEKHG1Q9ULL1 1385 aa3.1□□□□□ -1.91
CHD9-202ENST00000398510 ZW10O43264 779 aa3.1□□□□□ -1.91
CHD9-202ENST00000398510 TBCAO75347 108 aaKnown RBP3.1□□□□□ -1.91
CHD9-202ENST00000398510 HS1BP3Q53T59 392 aa3.1□□□□□ -1.91
CHD9-202ENST00000398510 EFHBQ8N7U6 833 aa3.1□□□□□ -1.91
CHD9-202ENST00000398510 RABGGTAQ92696 567 aa3.1□□□□□ -1.91
CHD9-202ENST00000398510 PRAM1Q96QH2 718 aa3.1□□□□□ -1.91
CHD9-202ENST00000398510 PANK3Q9H999 370 aa3.1□□□□□ -1.91
CHD9-202ENST00000398510 GPHNQ9NQX3 736 aaPredicted RBP3.1□□□□□ -1.91
CHD9-202ENST00000398510 RAI14Q9P0K7 980 aa3.1□□□□□ -1.91
CHD9-202ENST00000398510 CD2APQ9Y5K6 639 aa3.1□□□□□ -1.91
CHD9-202ENST00000398510 GPATCH8Q9UKJ3 1502 aaKnown RBP3.1□□□□□ -1.91
CHD9-202ENST00000398510 RIMBP3CA6NJZ7 1639 aa3.1□□□□□ -1.91
CHD9-202ENST00000398510 RIMBP3BA6NNM3 1639 aa3.1□□□□□ -1.91
CHD9-202ENST00000398510 RIMBP3Q9UFD9 1639 aa3.1□□□□□ -1.91
CHD9-202ENST00000398510 RPAP2Q8IXW5 612 aaPredicted RBP3.1□□□□□ -1.91
CHD9-202ENST00000398510 RNF214Q8ND24 703 aa3.1□□□□□ -1.91
CHD9-202ENST00000398510 RBM17Q96I25 401 aaKnown RBP3.1□□□□□ -1.91
CHD9-202ENST00000398510 CALR3Q96L12 384 aaKnown RBP3.1□□□□□ -1.91
CHD9-202ENST00000398510 RTCBQ9Y3I0 505 aaKnown RBP3.1□□□□□ -1.91
CHD9-202ENST00000398510 PCP11498 1178 aaKnown RBP3.1□□□□□ -1.91
CHD9-202ENST00000398510 ZSCAN16Q9H4T2 348 aaPredicted RBP3.1□□□□□ -1.91
CHD9-202ENST00000398510 SLX4Q8IY92 1834 aa3.1□□□□□ -1.91
CHD9-202ENST00000398510 SH2D4BQ5SQS7 431 aa3.1□□□□□ -1.91
CHD9-202ENST00000398510 IFNL2Q8IZJ0 200 aa3.1□□□□□ -1.91
CHD9-202ENST00000398510 L3MBTL2Q969R5 705 aa3.1□□□□□ -1.91
CHD9-202ENST00000398510 MKNK2Q9HBH9 465 aa3.1□□□□□ -1.91
CHD9-202ENST00000398510 ATF7P17544 494 aaPredicted RBP3.1□□□□□ -1.91
CHD9-202ENST00000398510 GTF2F1P35269 517 aaKnown RBP eCLIP3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms