RNA–Protein interactions for RNA: ENST00000398193.8

RGPD1-201, Transcript of RANBP2-like and GRIP domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RGPD1, Length 5,425 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD1-201ENST00000398193 ANKRD2Q9GZV1 360 aa8.81□□□□□ -1
RGPD1-201ENST00000398193 ZNF330Q9Y3S2 320 aaPredicted RBP8.81□□□□□ -1
RGPD1-201ENST00000398193 KCNJ4P48050 445 aa8.81□□□□□ -1
RGPD1-201ENST00000398193 L1TD1Q5T7N2 865 aaKnown RBP8.81□□□□□ -1
RGPD1-201ENST00000398193 JAKMIP1Q96N16 626 aaKnown RBP8.81□□□□□ -1
RGPD1-201ENST00000398193 ALX1Q15699 326 aa8.81□□□□□ -1
RGPD1-201ENST00000398193 CSPP1Q1MSJ5 1256 aa8.81□□□□□ -1
RGPD1-201ENST00000398193 LLPHQ9BRT6 129 aaKnown RBP8.81□□□□□ -1
RGPD1-201ENST00000398193 ATP6V1DQ9Y5K8 247 aa8.81□□□□□ -1
RGPD1-201ENST00000398193 NRXN2Q9P2S2 1712 aa8.81□□□□□ -1
RGPD1-201ENST00000398193 AK2P54819 239 aa8.81□□□□□ -1
RGPD1-201ENST00000398193 BLOC1S2Q6QNY1 142 aa8.81□□□□□ -1
RGPD1-201ENST00000398193 FAM196AQ6ZSG2 479 aa8.81□□□□□ -1
RGPD1-201ENST00000398193 RTCBQ9Y3I0 505 aaKnown RBP8.81□□□□□ -1
RGPD1-201ENST00000398193 GOLIM4O00461 696 aa8.8□□□□□ -1
RGPD1-201ENST00000398193 GNAT2P19087 354 aa8.8□□□□□ -1
RGPD1-201ENST00000398193 UBE4AQ14139 1066 aa8.8□□□□□ -1
RGPD1-201ENST00000398193 CCNL1Q9UK58 526 aaPredicted RBP8.8□□□□□ -1
RGPD1-201ENST00000398193 RASEFQ8IZ41 740 aa8.8□□□□□ -1
RGPD1-201ENST00000398193 TMEM87AQ8NBN3 555 aa8.8□□□□□ -1
RGPD1-201ENST00000398193 GNL3LQ9NVN8 582 aaKnown RBP8.8□□□□□ -1
RGPD1-201ENST00000398193 ZPR1O75312 459 aa8.8□□□□□ -1
RGPD1-201ENST00000398193 ADD2P35612 726 aa8.8□□□□□ -1
RGPD1-201ENST00000398193 MPHOSPH8Q99549 860 aa8.8□□□□□ -1
RGPD1-201ENST00000398193 AGXT2Q9BYV1 514 aa8.8□□□□□ -1
RGPD1-201ENST00000398193 HSPA1LP34931 641 aa8.79□□□□□ -1
RGPD1-201ENST00000398193 ZNF589Q86UQ0 364 aaPredicted RBP8.79□□□□□ -1
RGPD1-201ENST00000398193 NEK1Q96PY6 1258 aa8.79□□□□□ -1
RGPD1-201ENST00000398193 MTA3Q9BTC8 594 aa8.79□□□□□ -1
RGPD1-201ENST00000398193 MAST3O60307 1309 aa8.79□□□□□ -1
RGPD1-201ENST00000398193 BAG4O95429 457 aaKnown RBP8.79□□□□□ -1
RGPD1-201ENST00000398193 KCNQ2O43526 872 aa8.79□□□□□ -1
RGPD1-201ENST00000398193 PDCP20941 246 aa8.79□□□□□ -1
RGPD1-201ENST00000398193 DEKP35659 375 aaKnown RBP8.79□□□□□ -1
RGPD1-201ENST00000398193 TIMM10P62072 90 aa8.79□□□□□ -1
RGPD1-201ENST00000398193 ZNF804BA4D1E1 1349 aa8.79□□□□□ -1
RGPD1-201ENST00000398193 ZNF772Q68DY9 489 aaPredicted RBP8.79□□□□□ -1
RGPD1-201ENST00000398193 C15orf52Q6ZUT6 534 aaKnown RBP8.79□□□□□ -1
RGPD1-201ENST00000398193 ANKRD18AQ8IVF6 992 aa8.79□□□□□ -1
RGPD1-201ENST00000398193 TRAK2O60296 914 aa8.79□□□□□ -1
RGPD1-201ENST00000398193 SETDB2Q96T68 719 aa8.79□□□□□ -1
RGPD1-201ENST00000398193 BRWD3Q6RI45 1802 aa8.78□□□□□ -1
RGPD1-201ENST00000398193 PNPLA7Q6ZV29 1317 aa8.78□□□□□ -1
RGPD1-201ENST00000398193 KLHL40Q2TBA0 621 aa8.78□□□□□ -1
RGPD1-201ENST00000398193 ADORA1P30542 326 aa8.78□□□□□ -1
RGPD1-201ENST00000398193 EVCP57679 992 aa8.78□□□□□ -1
RGPD1-201ENST00000398193 CCDC102BQ68D86 513 aa8.78□□□□□ -1
RGPD1-201ENST00000398193 DDX46Q7L014 1031 aaKnown RBP8.78□□□□□ -1
RGPD1-201ENST00000398193 SEPT12Q8IYM1 358 aa8.78□□□□□ -1
RGPD1-201ENST00000398193 BCL11AQ9H165 835 aa8.78□□□□□ -1
RGPD1-201ENST00000398193 BCL2L12Q9HB09 334 aa8.78□□□□□ -1
RGPD1-201ENST00000398193 IMMTQ16891 758 aaKnown RBP8.78□□□□□ -1
RGPD1-201ENST00000398193 TPTE2Q6XPS3 522 aa8.78□□□□□ -1
RGPD1-201ENST00000398193 TMC4Q7Z404 712 aa8.78□□□□□ -1
RGPD1-201ENST00000398193 SPATA5Q8NB90 893 aa8.78□□□□□ -1
RGPD1-201ENST00000398193 SPRYD3Q8NCJ5 442 aa8.78□□□□□ -1
RGPD1-201ENST00000398193 SMC3Q9UQE7 1217 aa8.78□□□□□ -1
RGPD1-201ENST00000398193 KIF3AQ9Y496 699 aa8.78□□□□□ -1
RGPD1-201ENST00000398193 M0R2C6 588 aa8.78□□□□□ -1
RGPD1-201ENST00000398193 HSPD1P10809 573 aaKnown RBP8.78□□□□□ -1
RGPD1-201ENST00000398193 TRAPPC3LQ5T215 181 aa8.78□□□□□ -1
RGPD1-201ENST00000398193 AEBP2Q6ZN18 517 aaPredicted RBP8.78□□□□□ -1
RGPD1-201ENST00000398193 DHX32Q7L7V1 743 aaKnown RBP8.78□□□□□ -1
RGPD1-201ENST00000398193 ARXQ96QS3 562 aa8.78□□□□□ -1
RGPD1-201ENST00000398193 TNRC6CQ9HCJ0 1690 aaKnown RBP8.77□□□□□ -1
RGPD1-201ENST00000398193 MBD3O95983 291 aa8.77□□□□□ -1
RGPD1-201ENST00000398193 MCAMP43121 646 aa8.77□□□□□ -1
RGPD1-201ENST00000398193 EXOSC10Q01780 885 aaKnown RBP8.77□□□□□ -1
RGPD1-201ENST00000398193 MAP3K12Q12852 859 aa8.77□□□□□ -1
RGPD1-201ENST00000398193 NID2Q14112 1375 aa8.77□□□□□ -1.01
RGPD1-201ENST00000398193 TCRBV5S4A2TA0A5A2 114 aa8.77□□□□□ -1.01
RGPD1-201ENST00000398193 DENND2AQ9ULE3 1009 aa8.77□□□□□ -1.01
RGPD1-201ENST00000398193 ERFEQ4G0M1 354 aa8.77□□□□□ -1.01
RGPD1-201ENST00000398193 ZNF274Q96GC6 653 aaPredicted RBP8.77□□□□□ -1.01
RGPD1-201ENST00000398193 ZAP70P43403 619 aa8.77□□□□□ -1.01
RGPD1-201ENST00000398193 PFKFB2O60825 505 aa8.76□□□□□ -1.01
RGPD1-201ENST00000398193 CHRNDQ07001 517 aa8.76□□□□□ -1.01
RGPD1-201ENST00000398193 CERS3Q8IU89 383 aa8.76□□□□□ -1.01
RGPD1-201ENST00000398193 SALL1Q9NSC2 1324 aa8.76□□□□□ -1.01
RGPD1-201ENST00000398193 ZSCAN22P10073 491 aaPredicted RBP8.76□□□□□ -1.01
RGPD1-201ENST00000398193 PCP11498 1178 aaKnown RBP8.76□□□□□ -1.01
RGPD1-201ENST00000398193 TBC1D9BQ66K14 1250 aa8.76□□□□□ -1.01
RGPD1-201ENST00000398193 TNS1Q9HBL0 1735 aaKnown RBP8.76□□□□□ -1.01
RGPD1-201ENST00000398193 GNPATO15228 680 aa8.76□□□□□ -1.01
RGPD1-201ENST00000398193 TOB2Q14106 344 aaPredicted RBP8.76□□□□□ -1.01
RGPD1-201ENST00000398193 ADCK5Q3MIX3 580 aa8.76□□□□□ -1.01
RGPD1-201ENST00000398193 ZGPATQ8N5A5 531 aaKnown RBP8.76□□□□□ -1.01
RGPD1-201ENST00000398193 NLRP3Q96P20 1036 aa8.76□□□□□ -1.01
RGPD1-201ENST00000398193 RCAN1P53805 252 aa8.76□□□□□ -1.01
RGPD1-201ENST00000398193 FLAD1Q8NFF5 587 aa8.76□□□□□ -1.01
RGPD1-201ENST00000398193 ZDHHC9Q9Y397 364 aa8.76□□□□□ -1.01
RGPD1-201ENST00000398193 LAMB1P07942 1786 aa8.75□□□□□ -1.01
RGPD1-201ENST00000398193 DLEC1Q9Y238 1755 aa8.75□□□□□ -1.01
RGPD1-201ENST00000398193 FKBP4Q02790 459 aaKnown RBP eCLIP8.75□□□□□ -1.01
RGPD1-201ENST00000398193 ATL3Q6DD88 541 aa8.75□□□□□ -1.01
RGPD1-201ENST00000398193 HMGN5P82970 282 aaKnown RBP8.75□□□□□ -1.01
RGPD1-201ENST00000398193 GTF3C6Q969F1 213 aa8.75□□□□□ -1.01
RGPD1-201ENST00000398193 QTRT2Q9H974 415 aaKnown RBP8.75□□□□□ -1.01
RGPD1-201ENST00000398193 FSD2A1L4K1 749 aa8.75□□□□□ -1.01
RGPD1-201ENST00000398193 HCLS1P14317 486 aaPredicted RBP8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms