RNA–Protein interactions for RNA: ENST00000397172.7

APTX-207, Transcript of aprataxin, humanhuman

TSL 1 (best) BASIC

Gene APTX, Length 1,740 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-207ENST00000397172 BECN2A8MW95 431 aa11.53□□□□□ -0.56
APTX-207ENST00000397172 SMC1AQ14683 1233 aaKnown RBP11.53□□□□□ -0.56
APTX-207ENST00000397172 PWP2Q15269 919 aaKnown RBP11.53□□□□□ -0.56
APTX-207ENST00000397172 MTHFSDQ2M296 383 aaKnown RBP11.53□□□□□ -0.56
APTX-207ENST00000397172 C1orf141Q5JVX7 400 aa11.53□□□□□ -0.56
APTX-207ENST00000397172 SWT1Q5T5J6 900 aaKnown RBP11.53□□□□□ -0.56
APTX-207ENST00000397172 ZNF530Q6P9A1 599 aaPredicted RBP11.53□□□□□ -0.56
APTX-207ENST00000397172 BANK1Q8NDB2 785 aa11.53□□□□□ -0.56
APTX-207ENST00000397172 ARFGAP3Q9NP61 516 aa11.53□□□□□ -0.56
APTX-207ENST00000397172 CCDC196A0A1B0GTZ2 297 aa11.52□□□□□ -0.56
APTX-207ENST00000397172 CCDC69A6NI79 296 aa11.52□□□□□ -0.56
APTX-207ENST00000397172 RPS6KA5O75582 802 aa11.52□□□□□ -0.56
APTX-207ENST00000397172 OAS2P29728 719 aaKnown RBP11.52□□□□□ -0.56
APTX-207ENST00000397172 HSPA4P34932 840 aa11.52□□□□□ -0.56
APTX-207ENST00000397172 TRDNQ13061 729 aa11.52□□□□□ -0.56
APTX-207ENST00000397172 TWISTNBQ3B726 338 aaPredicted RBP11.52□□□□□ -0.56
APTX-207ENST00000397172 CEP85Q6P2H3 762 aa11.52□□□□□ -0.56
APTX-207ENST00000397172 NOL8Q76FK4 1167 aaKnown RBP11.52□□□□□ -0.56
APTX-207ENST00000397172 HOMEZQ8IX15 550 aa11.52□□□□□ -0.56
APTX-207ENST00000397172 PHACTR3Q96KR7 559 aa11.52□□□□□ -0.56
APTX-207ENST00000397172 CEP89Q96ST8 783 aa11.52□□□□□ -0.56
APTX-207ENST00000397172 UBXN6Q9BZV1 441 aa11.52□□□□□ -0.56
APTX-207ENST00000397172 ACBD3Q9H3P7 528 aa11.52□□□□□ -0.56
APTX-207ENST00000397172 POTEB2H3BUK9 544 aa11.52□□□□□ -0.57
APTX-207ENST00000397172 SETQ01105 290 aaPredicted RBP11.52□□□□□ -0.57
APTX-207ENST00000397172 ERCC6LQ2NKX8 1250 aa11.52□□□□□ -0.57
APTX-207ENST00000397172 CCDC125Q86Z20 511 aa11.52□□□□□ -0.57
APTX-207ENST00000397172 EFCAB13Q8IY85 973 aa11.52□□□□□ -0.57
APTX-207ENST00000397172 C16orf71Q8IYS4 520 aaPredicted RBP11.52□□□□□ -0.57
APTX-207ENST00000397172 MSL3Q8N5Y2 521 aaKnown RBP11.52□□□□□ -0.57
APTX-207ENST00000397172 GPR161Q8N6U8 529 aaKnown RBP11.52□□□□□ -0.57
APTX-207ENST00000397172 DCAF5Q96JK2 942 aa11.52□□□□□ -0.57
APTX-207ENST00000397172 ORC3Q9UBD5 711 aaPredicted RBP11.52□□□□□ -0.57
APTX-207ENST00000397172 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.52□□□□□ -0.57
APTX-207ENST00000397172 STX1AQ16623 288 aa11.51□□□□□ -0.57
APTX-207ENST00000397172 LRRFIP1Q32MZ4 808 aaKnown RBP11.51□□□□□ -0.57
APTX-207ENST00000397172 CCDC93Q567U6 631 aa11.51□□□□□ -0.57
APTX-207ENST00000397172 MCTP2Q6DN12 878 aa11.51□□□□□ -0.57
APTX-207ENST00000397172 SMARCE1Q969G3 411 aa11.51□□□□□ -0.57
APTX-207ENST00000397172 ST7Q9NRC1 585 aa11.51□□□□□ -0.57
APTX-207ENST00000397172 DONSONQ9NYP3 566 aa11.51□□□□□ -0.57
APTX-207ENST00000397172 NRBP1Q9UHY1 535 aa11.51□□□□□ -0.57
APTX-207ENST00000397172 DNAI1Q9UI46 699 aa11.51□□□□□ -0.57
APTX-207ENST00000397172 TTC41PQ6P2S7 1318 aa11.51□□□□□ -0.57
APTX-207ENST00000397172 GOLGA6L9A6NEM1 432 aa11.5□□□□□ -0.57
APTX-207ENST00000397172 SMC2O95347 1197 aa11.5□□□□□ -0.57
APTX-207ENST00000397172 CHMLP26374 656 aa11.5□□□□□ -0.57
APTX-207ENST00000397172 LMAN1P49257 510 aa11.5□□□□□ -0.57
APTX-207ENST00000397172 DNM1Q05193 864 aaKnown RBP11.5□□□□□ -0.57
APTX-207ENST00000397172 NFE2L2Q16236 605 aa11.5□□□□□ -0.57
APTX-207ENST00000397172 FAM182BQ5T319 152 aa11.5□□□□□ -0.57
APTX-207ENST00000397172 HOMER1Q86YM7 354 aa11.5□□□□□ -0.57
APTX-207ENST00000397172 AKT1S1Q96B36 256 aa11.5□□□□□ -0.57
APTX-207ENST00000397172 EP400Q96L91 3159 aa11.5□□□□□ -0.57
APTX-207ENST00000397172 ATP10DQ9P241 1426 aa11.49□□□□□ -0.57
APTX-207ENST00000397172 MAP3K5Q99683 1374 aa11.49□□□□□ -0.57
APTX-207ENST00000397172 GNAT3A8MTJ3 354 aa11.49□□□□□ -0.57
APTX-207ENST00000397172 ERVV-2B6SEH9 535 aa11.49□□□□□ -0.57
APTX-207ENST00000397172 ATP6V1AP38606 617 aa11.49□□□□□ -0.57
APTX-207ENST00000397172 MMS22LQ6ZRQ5 1243 aa11.49□□□□□ -0.57
APTX-207ENST00000397172 UTP14AQ9BVJ6 771 aaKnown RBP11.49□□□□□ -0.57
APTX-207ENST00000397172 OSBPL5Q9H0X9 879 aaPredicted RBP11.49□□□□□ -0.57
APTX-207ENST00000397172 MED4Q9NPJ6 270 aa11.49□□□□□ -0.57
APTX-207ENST00000397172 ATG3Q9NT62 314 aa11.49□□□□□ -0.57
APTX-207ENST00000397172 RBM28Q9NW13 759 aaKnown RBP11.49□□□□□ -0.57
APTX-207ENST00000397172 CPP00450 1065 aa11.49□□□□□ -0.57
APTX-207ENST00000397172 TUBBP07437 444 aa11.49□□□□□ -0.57
APTX-207ENST00000397172 BRD3Q15059 726 aa11.49□□□□□ -0.57
APTX-207ENST00000397172 ANKRD20A12PQ8NF67 263 aa11.49□□□□□ -0.57
APTX-207ENST00000397172 SPATA32Q96LK8 384 aa11.49□□□□□ -0.57
APTX-207ENST00000397172 ANO10Q9NW15 660 aa11.49□□□□□ -0.57
APTX-207ENST00000397172 MTMR6Q9Y217 621 aa11.49□□□□□ -0.57
APTX-207ENST00000397172 ZBTB12Q9Y330 459 aaPredicted RBP11.49□□□□□ -0.57
APTX-207ENST00000397172 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.48□□□□□ -0.57
APTX-207ENST00000397172 ZSCAN12O43309 604 aa11.48□□□□□ -0.57
APTX-207ENST00000397172 ERLIN1O75477 346 aa11.48□□□□□ -0.57
APTX-207ENST00000397172 SFPQP23246 707 aaKnown RBP eCLIP11.48□□□□□ -0.57
APTX-207ENST00000397172 GJB2P29033 226 aa11.48□□□□□ -0.57
APTX-207ENST00000397172 CCZ1BP86790 482 aa11.48□□□□□ -0.57
APTX-207ENST00000397172 CCZ1P86791 482 aaPredicted RBP11.48□□□□□ -0.57
APTX-207ENST00000397172 GPATCH11Q8N954 259 aa11.48□□□□□ -0.57
APTX-207ENST00000397172 SP7Q8TDD2 431 aaPredicted RBP11.48□□□□□ -0.57
APTX-207ENST00000397172 UPF3BQ9BZI7 483 aaKnown RBP11.48□□□□□ -0.57
APTX-207ENST00000397172 LRRCC1Q9C099 1032 aa11.48□□□□□ -0.57
APTX-207ENST00000397172 DACT1Q9NYF0 836 aa11.48□□□□□ -0.57
APTX-207ENST00000397172 VPS37CA5D8V6 355 aaPredicted RBP11.47□□□□□ -0.57
APTX-207ENST00000397172 TRIM66O15016 1216 aa11.47□□□□□ -0.57
APTX-207ENST00000397172 NPHP1O15259 732 aa11.47□□□□□ -0.57
APTX-207ENST00000397172 RNMTO43148 476 aaKnown RBP11.47□□□□□ -0.57
APTX-207ENST00000397172 EIF5P55010 431 aaKnown RBP11.47□□□□□ -0.57
APTX-207ENST00000397172 ETF1P62495 437 aaKnown RBP11.47□□□□□ -0.57
APTX-207ENST00000397172 SATB1Q01826 763 aa11.47□□□□□ -0.57
APTX-207ENST00000397172 CCDC144BQ3MJ40 725 aa11.47□□□□□ -0.57
APTX-207ENST00000397172 TPRNQ4KMQ1 711 aa11.47□□□□□ -0.57
APTX-207ENST00000397172 HSP90B2PQ58FF3 399 aa11.47□□□□□ -0.57
APTX-207ENST00000397172 VPS53Q5VIR6 699 aa11.47□□□□□ -0.57
APTX-207ENST00000397172 CC2D1AQ6P1N0 951 aaPredicted RBP11.47□□□□□ -0.57
APTX-207ENST00000397172 FCHSD1Q86WN1 690 aa11.47□□□□□ -0.57
APTX-207ENST00000397172 ERC1Q8IUD2 1116 aa11.47□□□□□ -0.57
APTX-207ENST00000397172 CCDC144CPQ8IYA2 1237 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms