RNA–Protein interactions for RNA: ENST00000397109.7

SEC13-208, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best) BASIC

Gene SEC13, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-208ENST00000397109 HELBQ8NG08 1087 aaPredicted RBP18.25■□□□□ 0.51
SEC13-208ENST00000397109 PGAP2Q9UHJ9 254 aa18.25■□□□□ 0.51
SEC13-208ENST00000397109 ZNF609O15014 1411 aa18.24■□□□□ 0.51
SEC13-208ENST00000397109 BCAR3O75815 825 aa18.24■□□□□ 0.51
SEC13-208ENST00000397109 INTS3Q68E01 1043 aaKnown RBP18.24■□□□□ 0.51
SEC13-208ENST00000397109 TXNRD3Q86VQ6 643 aa18.24■□□□□ 0.51
SEC13-208ENST00000397109 KLRG1Q96E93 195 aa18.24■□□□□ 0.51
SEC13-208ENST00000397109 PSME4Q14997 1843 aa18.23■□□□□ 0.51
SEC13-208ENST00000397109 PLIN1O60240 522 aa18.23■□□□□ 0.51
SEC13-208ENST00000397109 STRIP1Q5VSL9 837 aa18.23■□□□□ 0.51
SEC13-208ENST00000397109 ATF7IPQ6VMQ6 1270 aa18.23■□□□□ 0.51
SEC13-208ENST00000397109 TRPM4Q8TD43 1214 aa18.23■□□□□ 0.51
SEC13-208ENST00000397109 RIPOR2Q9Y4F9 1068 aa18.23■□□□□ 0.51
SEC13-208ENST00000397109 MROH5Q6ZUA9 1318 aa18.22■□□□□ 0.51
SEC13-208ENST00000397109 SHTN1A0MZ66 631 aa18.22■□□□□ 0.51
SEC13-208ENST00000397109 TMEM88BA6NKF7 163 aa18.22■□□□□ 0.51
SEC13-208ENST00000397109 HIRAP54198 1017 aaPredicted RBP18.22■□□□□ 0.51
SEC13-208ENST00000397109 UBE4AQ14139 1066 aa18.22■□□□□ 0.51
SEC13-208ENST00000397109 FRAT1Q92837 279 aaPredicted RBP18.22■□□□□ 0.51
SEC13-208ENST00000397109 MYO3BQ8WXR4 1341 aa18.22■□□□□ 0.51
SEC13-208ENST00000397109 TRIM27P14373 513 aa18.21■□□□□ 0.51
SEC13-208ENST00000397109 KLRK1P26718 216 aa18.21■□□□□ 0.51
SEC13-208ENST00000397109 MMP14P50281 582 aa18.21■□□□□ 0.51
SEC13-208ENST00000397109 SAMD7Q7Z3H4 446 aa18.21■□□□□ 0.51
SEC13-208ENST00000397109 ZNF804AQ7Z570 1209 aa18.21■□□□□ 0.51
SEC13-208ENST00000397109 GMLQ99445 158 aa18.21■□□□□ 0.51
SEC13-208ENST00000397109 PUS3Q9BZE2 481 aaKnown RBP18.21■□□□□ 0.51
SEC13-208ENST00000397109 CD209Q9NNX6 404 aa18.21■□□□□ 0.51
SEC13-208ENST00000397109 SNAP23O00161 211 aa18.2■□□□□ 0.5
SEC13-208ENST00000397109 GNAI3P08754 354 aa18.2■□□□□ 0.5
SEC13-208ENST00000397109 ZNF280AP59817 542 aaPredicted RBP18.2■□□□□ 0.5
SEC13-208ENST00000397109 TBC1D10BQ4KMP7 808 aaPredicted RBP18.2■□□□□ 0.5
SEC13-208ENST00000397109 DACT2Q5SW24 774 aa18.2■□□□□ 0.5
SEC13-208ENST00000397109 TTLL5Q6EMB2 1281 aa18.2■□□□□ 0.5
SEC13-208ENST00000397109 IRS2Q9Y4H2 1338 aa18.2■□□□□ 0.5
SEC13-208ENST00000397109 USP17L8P0C7I0 530 aa18.2■□□□□ 0.5
SEC13-208ENST00000397109 RBM26Q5T8P6 1007 aaKnown RBP18.2■□□□□ 0.5
SEC13-208ENST00000397109 ZKSCAN2Q63HK3 967 aa18.2■□□□□ 0.5
SEC13-208ENST00000397109 CDC37L1Q7L3B6 337 aa18.2■□□□□ 0.5
SEC13-208ENST00000397109 FBXW7Q969H0 707 aa18.2■□□□□ 0.5
SEC13-208ENST00000397109 A0A1B0GUL6 1792 aa18.19■□□□□ 0.5
SEC13-208ENST00000397109 KIF4BQ2VIQ3 1234 aa18.19■□□□□ 0.5
SEC13-208ENST00000397109 METTL24Q5JXM2 366 aa18.19■□□□□ 0.5
SEC13-208ENST00000397109 MEIS3Q99687 375 aa18.19■□□□□ 0.5
SEC13-208ENST00000397109 IL1R1P14778 569 aa18.18■□□□□ 0.5
SEC13-208ENST00000397109 GTF2IP78347 998 aa18.18■□□□□ 0.5
SEC13-208ENST00000397109 LRRC24Q50LG9 513 aa18.18■□□□□ 0.5
SEC13-208ENST00000397109 OGFOD1Q8N543 542 aa18.18■□□□□ 0.5
SEC13-208ENST00000397109 FBXO3Q9UK99 471 aa18.18■□□□□ 0.5
SEC13-208ENST00000397109 LRRFIP2Q9Y608 721 aaKnown RBP18.18■□□□□ 0.5
SEC13-208ENST00000397109 RFX5P48382 616 aaPredicted RBP18.17■□□□□ 0.5
SEC13-208ENST00000397109 JMYQ8N9B5 988 aa18.17■□□□□ 0.5
SEC13-208ENST00000397109 DCPSQ96C86 337 aaKnown RBP18.17■□□□□ 0.5
SEC13-208ENST00000397109 EYA2O00167 538 aa18.16■□□□□ 0.5
SEC13-208ENST00000397109 TRAF5O00463 557 aa18.16■□□□□ 0.5
SEC13-208ENST00000397109 PDE8BO95263 885 aa18.16■□□□□ 0.5
SEC13-208ENST00000397109 EGFRP00533 1210 aa18.16■□□□□ 0.5
SEC13-208ENST00000397109 PTPN12Q05209 780 aaKnown RBP18.16■□□□□ 0.5
SEC13-208ENST00000397109 KLHDC4Q8TBB5 520 aa18.16■□□□□ 0.5
SEC13-208ENST00000397109 CLUAP1Q96AJ1 413 aa18.16■□□□□ 0.5
SEC13-208ENST00000397109 GLIS2Q9BZE0 524 aaPredicted RBP18.16■□□□□ 0.5
SEC13-208ENST00000397109 MYOZ2Q9NPC6 264 aa18.16■□□□□ 0.5
SEC13-208ENST00000397109 TRPM7Q96QT4 1865 aa18.16■□□□□ 0.5
SEC13-208ENST00000397109 HIBADHP31937 336 aaKnown RBP18.15■□□□□ 0.5
SEC13-208ENST00000397109 FKBP1AP62942 108 aaKnown RBP18.15■□□□□ 0.5
SEC13-208ENST00000397109 HDAC9Q9UKV0 1011 aa18.15■□□□□ 0.5
SEC13-208ENST00000397109 POLR2AP24928 1970 aaKnown RBP18.15■□□□□ 0.5
SEC13-208ENST00000397109 NEFLP07196 543 aa18.14■□□□□ 0.5
SEC13-208ENST00000397109 KRT26Q7Z3Y9 468 aa18.14■□□□□ 0.5
SEC13-208ENST00000397109 VGLL2Q8N8G2 317 aa18.14■□□□□ 0.5
SEC13-208ENST00000397109 FAM84BQ96KN1 310 aaPredicted RBP18.14■□□□□ 0.5
SEC13-208ENST00000397109 MXD3Q9BW11 206 aa18.14■□□□□ 0.5
SEC13-208ENST00000397109 MKRN1Q9UHC7 482 aaKnown RBP18.14■□□□□ 0.5
SEC13-208ENST00000397109 CNTNAP1P78357 1384 aa18.14■□□□□ 0.49
SEC13-208ENST00000397109 CIAO1O76071 339 aa18.14■□□□□ 0.49
SEC13-208ENST00000397109 SASH1O94885 1247 aa18.14■□□□□ 0.49
SEC13-208ENST00000397109 FMR1Q06787 632 aaKnown RBP eCLIP18.14■□□□□ 0.49
SEC13-208ENST00000397109 SCARF1Q14162 830 aa18.14■□□□□ 0.49
SEC13-208ENST00000397109 CAVIN4Q5BKX8 364 aa18.14■□□□□ 0.49
SEC13-208ENST00000397109 USP48Q86UV5 1035 aa18.14■□□□□ 0.49
SEC13-208ENST00000397109 VPS37DQ86XT2 251 aa18.14■□□□□ 0.49
SEC13-208ENST00000397109 FTSJ3Q8IY81 847 aaKnown RBP18.14■□□□□ 0.49
SEC13-208ENST00000397109 TDRD7Q8NHU6 1098 aaKnown RBP18.14■□□□□ 0.49
SEC13-208ENST00000397109 ABT1Q9ULW3 272 aaKnown RBP18.14■□□□□ 0.49
SEC13-208ENST00000397109 TNNQ9UQP3 1299 aa18.14■□□□□ 0.49
SEC13-208ENST00000397109 CELF2O95319 508 aaKnown RBP18.13■□□□□ 0.49
SEC13-208ENST00000397109 GNAI2P04899 355 aa18.13■□□□□ 0.49
SEC13-208ENST00000397109 IFIT1P09914 478 aaKnown RBP18.13■□□□□ 0.49
SEC13-208ENST00000397109 GYG1P46976 350 aa18.13■□□□□ 0.49
SEC13-208ENST00000397109 PUM3Q15397 648 aaKnown RBP18.13■□□□□ 0.49
SEC13-208ENST00000397109 DEFB115Q30KQ5 88 aa18.13■□□□□ 0.49
SEC13-208ENST00000397109 CST9Q5W186 159 aa18.13■□□□□ 0.49
SEC13-208ENST00000397109 SULF1Q8IWU6 871 aa18.13■□□□□ 0.49
SEC13-208ENST00000397109 DZIP1LQ8IYY4 767 aaKnown RBP18.13■□□□□ 0.49
SEC13-208ENST00000397109 TMEM57Q8N5G2 664 aa18.13■□□□□ 0.49
SEC13-208ENST00000397109 GGA3Q9NZ52 723 aa18.13■□□□□ 0.49
SEC13-208ENST00000397109 RASSF10A6NK89 507 aa18.12■□□□□ 0.49
SEC13-208ENST00000397109 MTX1Q13505 466 aa18.12■□□□□ 0.49
SEC13-208ENST00000397109 ERICH6BQ5W0A0 696 aa18.12■□□□□ 0.49
SEC13-208ENST00000397109 FBXO33Q7Z6M2 555 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms