RNA–Protein interactions for RNA: ENST00000395906.7

CDRT1-204, CMT1A duplicated region transcript 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDRT1, Length 2,571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-204ENST00000395906 XRN1Q8IZH2 1706 aaKnown RBP11.2□□□□□ -0.62
CDRT1-204ENST00000395906 PIK3R4Q99570 1358 aa11.2□□□□□ -0.62
CDRT1-204ENST00000395906 A0A1B0GUA9 196 aa11.2□□□□□ -0.62
CDRT1-204ENST00000395906 PSME1Q06323 249 aa11.2□□□□□ -0.62
CDRT1-204ENST00000395906 ABTB2Q8N961 1025 aa11.2□□□□□ -0.62
CDRT1-204ENST00000395906 ZKSCAN4Q969J2 545 aaPredicted RBP11.2□□□□□ -0.62
CDRT1-204ENST00000395906 CARD6Q9BX69 1037 aa11.2□□□□□ -0.62
CDRT1-204ENST00000395906 ACBD3Q9H3P7 528 aa11.2□□□□□ -0.62
CDRT1-204ENST00000395906 CCDC151A5D8V7 595 aa11.19□□□□□ -0.62
CDRT1-204ENST00000395906 ERC2O15083 957 aa11.19□□□□□ -0.62
CDRT1-204ENST00000395906 SNUPNO95149 360 aaKnown RBP11.19□□□□□ -0.62
CDRT1-204ENST00000395906 CAVIN2O95810 425 aa11.19□□□□□ -0.62
CDRT1-204ENST00000395906 HMOX1P09601 288 aa11.19□□□□□ -0.62
CDRT1-204ENST00000395906 KCNJ6P48051 423 aa11.19□□□□□ -0.62
CDRT1-204ENST00000395906 RPS6KA3P51812 740 aa11.19□□□□□ -0.62
CDRT1-204ENST00000395906 ETF1P62495 437 aaKnown RBP11.19□□□□□ -0.62
CDRT1-204ENST00000395906 BRD3Q15059 726 aa11.19□□□□□ -0.62
CDRT1-204ENST00000395906 PDCD2Q16342 344 aaPredicted RBP11.19□□□□□ -0.62
CDRT1-204ENST00000395906 E4F1Q66K89 784 aaPredicted RBP11.19□□□□□ -0.62
CDRT1-204ENST00000395906 CNNM3Q8NE01 707 aa11.19□□□□□ -0.62
CDRT1-204ENST00000395906 SSH1Q8WYL5 1049 aa11.19□□□□□ -0.62
CDRT1-204ENST00000395906 THOC1Q96FV9 657 aaKnown RBP11.19□□□□□ -0.62
CDRT1-204ENST00000395906 FAN1Q9Y2M0 1017 aa11.19□□□□□ -0.62
CDRT1-204ENST00000395906 POLR3AO14802 1390 aaPredicted RBP11.19□□□□□ -0.62
CDRT1-204ENST00000395906 PARD6BQ9BYG5 372 aa11.19□□□□□ -0.62
CDRT1-204ENST00000395906 USP32Q8NFA0 1604 aa11.18□□□□□ -0.62
CDRT1-204ENST00000395906 CHMLP26374 656 aa11.18□□□□□ -0.62
CDRT1-204ENST00000395906 WLSQ5T9L3 541 aa11.18□□□□□ -0.62
CDRT1-204ENST00000395906 HDXQ7Z353 690 aa11.18□□□□□ -0.62
CDRT1-204ENST00000395906 FAM71BQ8TC56 605 aa11.18□□□□□ -0.62
CDRT1-204ENST00000395906 RABGGTAQ92696 567 aa11.18□□□□□ -0.62
CDRT1-204ENST00000395906 SUDS3Q9H7L9 328 aaPredicted RBP11.18□□□□□ -0.62
CDRT1-204ENST00000395906 RGS12O14924 1447 aa11.18□□□□□ -0.62
CDRT1-204ENST00000395906 EDC4Q6P2E9 1401 aaKnown RBP11.18□□□□□ -0.62
CDRT1-204ENST00000395906 CCP110O43303 1012 aa11.18□□□□□ -0.62
CDRT1-204ENST00000395906 ZNF165P49910 485 aa11.18□□□□□ -0.62
CDRT1-204ENST00000395906 IQCA1Q86XH1 822 aa11.18□□□□□ -0.62
CDRT1-204ENST00000395906 MICAL1Q8TDZ2 1067 aa11.18□□□□□ -0.62
CDRT1-204ENST00000395906 PLEKHA4Q9H4M7 779 aa11.18□□□□□ -0.62
CDRT1-204ENST00000395906 BICC1Q9H694 974 aaKnown RBP11.18□□□□□ -0.62
CDRT1-204ENST00000395906 C19orf44Q9H6X5 657 aa11.18□□□□□ -0.62
CDRT1-204ENST00000395906 NALCNQ8IZF0 1738 aa11.17□□□□□ -0.62
CDRT1-204ENST00000395906 F13A1P00488 732 aa11.17□□□□□ -0.62
CDRT1-204ENST00000395906 ATF3P18847 181 aa11.17□□□□□ -0.62
CDRT1-204ENST00000395906 INPP5BP32019 993 aa11.17□□□□□ -0.62
CDRT1-204ENST00000395906 PSMD2Q13200 908 aa11.17□□□□□ -0.62
CDRT1-204ENST00000395906 SLC5A9Q2M3M2 681 aa11.17□□□□□ -0.62
CDRT1-204ENST00000395906 HNRNPLLQ8WVV9 542 aaKnown RBP11.17□□□□□ -0.62
CDRT1-204ENST00000395906 FAM169AQ9Y6X4 670 aa11.17□□□□□ -0.62
CDRT1-204ENST00000395906 USP6P35125 1406 aa11.17□□□□□ -0.62
CDRT1-204ENST00000395906 EME2A4GXA9 379 aaPredicted RBP11.17□□□□□ -0.62
CDRT1-204ENST00000395906 AP1G2O75843 785 aa11.17□□□□□ -0.62
CDRT1-204ENST00000395906 URI1O94763 535 aaPredicted RBP11.17□□□□□ -0.62
CDRT1-204ENST00000395906 GNL2Q13823 731 aaKnown RBP11.17□□□□□ -0.62
CDRT1-204ENST00000395906 HSP90AB2PQ58FF8 381 aa11.17□□□□□ -0.62
CDRT1-204ENST00000395906 RSRC2Q7L4I2 434 aaKnown RBP11.17□□□□□ -0.62
CDRT1-204ENST00000395906 HOMER1Q86YM7 354 aa11.17□□□□□ -0.62
CDRT1-204ENST00000395906 CFAP53Q96M91 514 aa11.17□□□□□ -0.62
CDRT1-204ENST00000395906 THUMPD2Q9BTF0 503 aaKnown RBP11.17□□□□□ -0.62
CDRT1-204ENST00000395906 EPC1Q9H2F5 836 aa11.17□□□□□ -0.62
CDRT1-204ENST00000395906 TNMDQ9H2S6 317 aa11.17□□□□□ -0.62
CDRT1-204ENST00000395906 STRCP1A6NGW2 1772 aa11.16□□□□□ -0.62
CDRT1-204ENST00000395906 GOLGA6L19H0YKK7 550 aa11.16□□□□□ -0.62
CDRT1-204ENST00000395906 HSP90B2PQ58FF3 399 aa11.16□□□□□ -0.62
CDRT1-204ENST00000395906 CC2D2BQ6DHV5 1058 aa11.16□□□□□ -0.62
CDRT1-204ENST00000395906 TRIM74Q86UV6 250 aa11.16□□□□□ -0.62
CDRT1-204ENST00000395906 TRIM73Q86UV7 250 aa11.16□□□□□ -0.62
CDRT1-204ENST00000395906 BICD2Q8TD16 824 aa11.16□□□□□ -0.62
CDRT1-204ENST00000395906 STX6O43752 255 aa11.16□□□□□ -0.62
CDRT1-204ENST00000395906 GCKP35557 465 aa11.16□□□□□ -0.62
CDRT1-204ENST00000395906 CLNS1AP54105 237 aaKnown RBP11.16□□□□□ -0.62
CDRT1-204ENST00000395906 RBM43Q6ZSC3 357 aaKnown RBP11.16□□□□□ -0.62
CDRT1-204ENST00000395906 PIK3R5Q8WYR1 880 aa11.16□□□□□ -0.62
CDRT1-204ENST00000395906 TMX4Q9H1E5 349 aaPredicted RBP11.16□□□□□ -0.62
CDRT1-204ENST00000395906 ANAPC4Q9UJX5 808 aa11.16□□□□□ -0.62
CDRT1-204ENST00000395906 CDC42BPGQ6DT37 1551 aa11.16□□□□□ -0.62
CDRT1-204ENST00000395906 MSH6P52701 1360 aa11.15□□□□□ -0.62
CDRT1-204ENST00000395906 ADGRL3Q9HAR2 1447 aa11.15□□□□□ -0.62
CDRT1-204ENST00000395906 EBAG9O00559 213 aa11.15□□□□□ -0.62
CDRT1-204ENST00000395906 ECM2O94769 699 aaPredicted RBP11.15□□□□□ -0.62
CDRT1-204ENST00000395906 PECAM1P16284 738 aaPredicted RBP11.15□□□□□ -0.62
CDRT1-204ENST00000395906 PRPHP41219 470 aa11.15□□□□□ -0.62
CDRT1-204ENST00000395906 MCM6Q14566 821 aa11.15□□□□□ -0.62
CDRT1-204ENST00000395906 CAMK4Q16566 473 aa11.15□□□□□ -0.62
CDRT1-204ENST00000395906 TBC1D25Q3MII6 688 aa11.15□□□□□ -0.62
CDRT1-204ENST00000395906 VPS53Q5VIR6 699 aa11.15□□□□□ -0.62
CDRT1-204ENST00000395906 AMOTL1Q8IY63 956 aa11.15□□□□□ -0.62
CDRT1-204ENST00000395906 RPUSD2Q8IZ73 545 aaKnown RBP11.15□□□□□ -0.62
CDRT1-204ENST00000395906 DRAXINQ8NBI3 349 aaPredicted RBP11.15□□□□□ -0.62
CDRT1-204ENST00000395906 LTV1Q96GA3 475 aaPredicted RBP11.15□□□□□ -0.62
CDRT1-204ENST00000395906 CD248Q9HCU0 757 aa11.15□□□□□ -0.62
CDRT1-204ENST00000395906 IMPACTQ9P2X3 320 aa11.15□□□□□ -0.62
CDRT1-204ENST00000395906 USP16Q9Y5T5 823 aa11.15□□□□□ -0.62
CDRT1-204ENST00000395906 STRCQ7RTU9 1775 aa11.15□□□□□ -0.63
CDRT1-204ENST00000395906 DIAPH1O60610 1272 aaKnown RBP11.15□□□□□ -0.63
CDRT1-204ENST00000395906 PPFIA2O75334 1257 aa11.15□□□□□ -0.63
CDRT1-204ENST00000395906 SDSP20132 328 aa11.15□□□□□ -0.63
CDRT1-204ENST00000395906 TXLNAP40222 546 aa11.15□□□□□ -0.63
CDRT1-204ENST00000395906 DHX8Q14562 1220 aaKnown RBP11.15□□□□□ -0.63
CDRT1-204ENST00000395906 NOL8Q76FK4 1167 aaKnown RBP11.15□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms