RNA–Protein interactions for RNA: ENST00000394848.5

SSH2-203, Transcript of slingshot protein phosphatase 2, humanhuman

TSL 1 (best)

Gene SSH2, Length 1,796 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH2-203ENST00000394848 FKBP4Q02790 459 aaKnown RBP eCLIP15.15■□□□□ 0.02
SSH2-203ENST00000394848 PUM3Q15397 648 aaKnown RBP15.15■□□□□ 0.02
SSH2-203ENST00000394848 CRY2Q49AN0 593 aa15.15■□□□□ 0.02
SSH2-203ENST00000394848 C3orf67Q6ZVT6 689 aa15.15■□□□□ 0.02
SSH2-203ENST00000394848 LPIN2Q92539 896 aa15.15■□□□□ 0.02
SSH2-203ENST00000394848 CDC5LQ99459 802 aaKnown RBP15.15■□□□□ 0.02
SSH2-203ENST00000394848 RFX7Q2KHR2 1363 aa15.15■□□□□ 0.02
SSH2-203ENST00000394848 PDE6BP35913 854 aa15.14■□□□□ 0.01
SSH2-203ENST00000394848 NBR1Q14596 966 aa15.14■□□□□ 0.01
SSH2-203ENST00000394848 MAP4K1Q92918 833 aa15.14■□□□□ 0.01
SSH2-203ENST00000394848 CCDC171Q6TFL3 1326 aa15.14■□□□□ 0.01
SSH2-203ENST00000394848 C10orf71Q711Q0 1435 aa15.14■□□□□ 0.01
SSH2-203ENST00000394848 HSP90AA1P07900 732 aaKnown RBP15.13■□□□□ 0.01
SSH2-203ENST00000394848 FGFR2P21802 821 aa15.13■□□□□ 0.01
SSH2-203ENST00000394848 ZNF512BQ96KM6 892 aaPredicted RBP15.13■□□□□ 0.01
SSH2-203ENST00000394848 SNX14Q9Y5W7 946 aa15.13■□□□□ 0.01
SSH2-203ENST00000394848 AK9Q5TCS8 1911 aa15.13■□□□□ 0.01
SSH2-203ENST00000394848 TAF5LO75529 589 aa15.13■□□□□ 0.01
SSH2-203ENST00000394848 KCNJ4P48050 445 aa15.13■□□□□ 0.01
SSH2-203ENST00000394848 MCMDC2Q4G0Z9 681 aa15.13■□□□□ 0.01
SSH2-203ENST00000394848 ANKRD18AQ8IVF6 992 aa15.13■□□□□ 0.01
SSH2-203ENST00000394848 IL27Q8NEV9 243 aa15.13■□□□□ 0.01
SSH2-203ENST00000394848 SLC5A1P13866 664 aa15.12■□□□□ 0.01
SSH2-203ENST00000394848 SCARF1Q14162 830 aa15.12■□□□□ 0.01
SSH2-203ENST00000394848 NECTIN1Q15223 517 aa15.12■□□□□ 0.01
SSH2-203ENST00000394848 ZNF589Q86UQ0 364 aaPredicted RBP15.12■□□□□ 0.01
SSH2-203ENST00000394848 RASEFQ8IZ41 740 aa15.12■□□□□ 0.01
SSH2-203ENST00000394848 MYH3P11055 1940 aa15.12■□□□□ 0.01
SSH2-203ENST00000394848 CHGBP05060 677 aa15.11■□□□□ 0.01
SSH2-203ENST00000394848 ZAP70P43403 619 aa15.11■□□□□ 0.01
SSH2-203ENST00000394848 MCM2P49736 904 aa15.11■□□□□ 0.01
SSH2-203ENST00000394848 LRRFIP1Q32MZ4 808 aaKnown RBP15.11■□□□□ 0.01
SSH2-203ENST00000394848 CCDC102BQ68D86 513 aa15.11■□□□□ 0.01
SSH2-203ENST00000394848 PRPF40BQ6NWY9 871 aaKnown RBP15.11■□□□□ 0.01
SSH2-203ENST00000394848 HELLSQ9NRZ9 838 aa15.11■□□□□ 0.01
SSH2-203ENST00000394848 CD2APQ9Y5K6 639 aa15.11■□□□□ 0.01
SSH2-203ENST00000394848 RBM8AQ9Y5S9 174 aaKnown RBP15.11■□□□□ 0.01
SSH2-203ENST00000394848 MED23Q9ULK4 1368 aa15.11■□□□□ 0.01
SSH2-203ENST00000394848 RNF113AO15541 343 aaKnown RBP15.11■□□□□ 0.01
SSH2-203ENST00000394848 UQCRFS1P1P0C7P4 283 aa15.11■□□□□ 0.01
SSH2-203ENST00000394848 SRGNP10124 158 aa15.11■□□□□ 0.01
SSH2-203ENST00000394848 HOXA10P31260 410 aaPredicted RBP15.11■□□□□ 0.01
SSH2-203ENST00000394848 CHRNDQ07001 517 aa15.11■□□□□ 0.01
SSH2-203ENST00000394848 KCNB2Q92953 911 aa15.11■□□□□ 0.01
SSH2-203ENST00000394848 SEC62Q99442 399 aaKnown RBP15.11■□□□□ 0.01
SSH2-203ENST00000394848 BSDC1Q9NW68 430 aaPredicted RBP15.11■□□□□ 0.01
SSH2-203ENST00000394848 CHMP5Q9NZZ3 219 aa15.11■□□□□ 0.01
SSH2-203ENST00000394848 SNAP23O00161 211 aa15.1■□□□□ 0.01
SSH2-203ENST00000394848 ZKSCAN1P17029 563 aaPredicted RBP15.1■□□□□ 0.01
SSH2-203ENST00000394848 MCAMP43121 646 aa15.1■□□□□ 0.01
SSH2-203ENST00000394848 PHKA1P46020 1223 aa15.1■□□□□ 0.01
SSH2-203ENST00000394848 TGFB2P61812 414 aa15.1■□□□□ 0.01
SSH2-203ENST00000394848 UPF3BQ9BZI7 483 aaKnown RBP15.1■□□□□ 0.01
SSH2-203ENST00000394848 DDX60Q8IY21 1712 aaKnown RBP15.09■□□□□ 0.01
SSH2-203ENST00000394848 H0YIN7 160 aa15.09■□□□□ 0.01
SSH2-203ENST00000394848 ZMYM1Q5SVZ6 1142 aa15.09■□□□□ 0.01
SSH2-203ENST00000394848 CREB3L3Q68CJ9 461 aa15.09■□□□□ 0.01
SSH2-203ENST00000394848 PI16Q6UXB8 463 aa15.09■□□□□ 0.01
SSH2-203ENST00000394848 PIAS4Q8N2W9 510 aaPredicted RBP15.09■□□□□ 0.01
SSH2-203ENST00000394848 FOXD4L1Q9NU39 408 aa15.09■□□□□ 0.01
SSH2-203ENST00000394848 ZFYP08048 801 aaPredicted RBP15.08■□□□□ 0.01
SSH2-203ENST00000394848 NPR1P16066 1061 aa15.08■□□□□ 0.01
SSH2-203ENST00000394848 ARID4AP29374 1257 aaPredicted RBP15.08■□□□□ 0.01
SSH2-203ENST00000394848 DDIT3P35638 169 aa15.08■□□□□ 0.01
SSH2-203ENST00000394848 RPS8P62241 208 aaKnown RBP15.08■□□□□ 0.01
SSH2-203ENST00000394848 TTF1Q15361 905 aaPredicted RBP15.08■□□□□ 0.01
SSH2-203ENST00000394848 SLFNL1Q499Z3 407 aa15.08■□□□□ 0.01
SSH2-203ENST00000394848 RNF20Q5VTR2 975 aa15.08■□□□□ 0.01
SSH2-203ENST00000394848 CCDC129Q6ZRS4 1044 aa15.08■□□□□ 0.01
SSH2-203ENST00000394848 C2CD5Q86YS7 1000 aa15.08■□□□□ 0.01
SSH2-203ENST00000394848 RPGRQ92834 1020 aaKnown RBP15.08■□□□□ 0.01
SSH2-203ENST00000394848 CELF1Q92879 486 aaKnown RBP15.08■□□□□ 0.01
SSH2-203ENST00000394848 MASTLQ96GX5 879 aa15.08■□□□□ 0.01
SSH2-203ENST00000394848 CRAMP1Q96RY5 1269 aa15.08■□□□□ 0.01
SSH2-203ENST00000394848 LRP5O75197 1615 aa15.08■□□□□ 0
SSH2-203ENST00000394848 SLC27A2O14975 620 aa15.08■□□□□ 0
SSH2-203ENST00000394848 NFKBIBQ15653 356 aa15.08■□□□□ 0
SSH2-203ENST00000394848 RBM17Q96I25 401 aaKnown RBP15.08■□□□□ 0
SSH2-203ENST00000394848 MINPP1Q9UNW1 487 aa15.08■□□□□ 0
SSH2-203ENST00000394848 LAMB2P55268 1798 aa15.08■□□□□ 0
SSH2-203ENST00000394848 TNRC6CQ9HCJ0 1690 aaKnown RBP15.07■□□□□ 0
SSH2-203ENST00000394848 CYP2E1P05181 493 aaPredicted RBP15.07■□□□□ 0
SSH2-203ENST00000394848 CHRNA5P30532 468 aa15.07■□□□□ 0
SSH2-203ENST00000394848 STYK1Q6J9G0 422 aa15.07■□□□□ 0
SSH2-203ENST00000394848 TM6SF1Q9BZW5 370 aa15.07■□□□□ 0
SSH2-203ENST00000394848 PPP1R1BQ9UD71 204 aaPredicted RBP15.07■□□□□ 0
SSH2-203ENST00000394848 U3KPZ7 1027 aaPredicted RBP15.07■□□□□ 0
SSH2-203ENST00000394848 CASTP20810 708 aaKnown RBP15.06■□□□□ 0
SSH2-203ENST00000394848 KCNA3P22001 575 aa15.06■□□□□ 0
SSH2-203ENST00000394848 ALDH1B1P30837 517 aa15.06■□□□□ 0
SSH2-203ENST00000394848 ADCK5Q3MIX3 580 aa15.06■□□□□ 0
SSH2-203ENST00000394848 TMX3Q96JJ7 454 aa15.06■□□□□ 0
SSH2-203ENST00000394848 JAKMIP1Q96N16 626 aaKnown RBP15.06■□□□□ 0
SSH2-203ENST00000394848 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.06■□□□□ 0
SSH2-203ENST00000394848 HMG20BQ9P0W2 317 aa15.06■□□□□ 0
SSH2-203ENST00000394848 CIZ1Q9ULV3 898 aaPredicted RBP15.06■□□□□ 0
SSH2-203ENST00000394848 ANKRD31Q8N7Z5 1873 aa15.06■□□□□ 0
SSH2-203ENST00000394848 A0A0G2JLW4 131 aa15.06■□□□□ 0
SSH2-203ENST00000394848 DPEP1P16444 411 aa15.06■□□□□ 0
SSH2-203ENST00000394848 BCAMP50895 628 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms