RNA–Protein interactions for RNA: ENST00000394633.7

PCDHA1-202, Transcript of protocadherin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene PCDHA1, Length 2,204 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-202ENST00000394633 KCPQ6ZWJ8 1503 aa21.62■■□□□ 1.05
PCDHA1-202ENST00000394633 RABL6Q3YEC7 729 aaPredicted RBP21.61■■□□□ 1.05
PCDHA1-202ENST00000394633 NRBP1Q9UHY1 535 aa21.61■■□□□ 1.05
PCDHA1-202ENST00000394633 PIP4K2AP48426 406 aaPredicted RBP21.61■■□□□ 1.05
PCDHA1-202ENST00000394633 DDB1Q16531 1140 aa21.61■■□□□ 1.05
PCDHA1-202ENST00000394633 FAM98CQ17RN3 349 aaKnown RBP21.61■■□□□ 1.05
PCDHA1-202ENST00000394633 MCMDC2Q4G0Z9 681 aa21.61■■□□□ 1.05
PCDHA1-202ENST00000394633 HAUS7Q99871 368 aa21.61■■□□□ 1.05
PCDHA1-202ENST00000394633 DNAJC25Q9H1X3 360 aa21.61■■□□□ 1.05
PCDHA1-202ENST00000394633 USP16Q9Y5T5 823 aa21.61■■□□□ 1.05
PCDHA1-202ENST00000394633 H3BQV1 296 aa21.6■■□□□ 1.05
PCDHA1-202ENST00000394633 SCRN1Q12765 414 aa21.6■■□□□ 1.05
PCDHA1-202ENST00000394633 LRMPQ12912 555 aa21.6■■□□□ 1.05
PCDHA1-202ENST00000394633 IFFO2Q5TF58 517 aa21.6■■□□□ 1.05
PCDHA1-202ENST00000394633 UBE3BQ7Z3V4 1068 aa21.6■■□□□ 1.05
PCDHA1-202ENST00000394633 SMARCC2Q8TAQ2 1214 aa21.6■■□□□ 1.05
PCDHA1-202ENST00000394633 FMNL2Q96PY5 1086 aa21.6■■□□□ 1.05
PCDHA1-202ENST00000394633 LRRC2Q9BYS8 371 aa21.6■■□□□ 1.05
PCDHA1-202ENST00000394633 TRIM5Q9C035 493 aa21.6■■□□□ 1.05
PCDHA1-202ENST00000394633 ZNF165P49910 485 aa21.6■■□□□ 1.05
PCDHA1-202ENST00000394633 CHAF1AQ13111 956 aaPredicted RBP21.6■■□□□ 1.05
PCDHA1-202ENST00000394633 STOX1Q6ZVD7 989 aa21.6■■□□□ 1.05
PCDHA1-202ENST00000394633 PIGBQ92521 554 aa21.6■■□□□ 1.05
PCDHA1-202ENST00000394633 ZSCAN16Q9H4T2 348 aaPredicted RBP21.6■■□□□ 1.05
PCDHA1-202ENST00000394633 TMOD3Q9NYL9 352 aa21.6■■□□□ 1.05
PCDHA1-202ENST00000394633 DOT1LQ8TEK3 1739 aa21.6■■□□□ 1.05
PCDHA1-202ENST00000394633 PTCD1O75127 700 aaKnown RBP21.59■■□□□ 1.05
PCDHA1-202ENST00000394633 VPS72Q15906 364 aa21.59■■□□□ 1.05
PCDHA1-202ENST00000394633 DDX46Q7L014 1031 aaKnown RBP21.59■■□□□ 1.05
PCDHA1-202ENST00000394633 ARHGAP30Q7Z6I6 1101 aaPredicted RBP21.59■■□□□ 1.05
PCDHA1-202ENST00000394633 DRC7Q8IY82 874 aa21.59■■□□□ 1.05
PCDHA1-202ENST00000394633 USP21Q9UK80 565 aa21.59■■□□□ 1.05
PCDHA1-202ENST00000394633 BARGINQ6ZT62 677 aa21.59■■□□□ 1.05
PCDHA1-202ENST00000394633 SNRPA1P09661 255 aaKnown RBP21.58■■□□□ 1.05
PCDHA1-202ENST00000394633 ADD1P35611 737 aaKnown RBP21.58■■□□□ 1.05
PCDHA1-202ENST00000394633 SMAP1Q8IYB5 467 aaPredicted RBP21.58■■□□□ 1.05
PCDHA1-202ENST00000394633 CDCA7Q9BWT1 371 aaPredicted RBP21.58■■□□□ 1.05
PCDHA1-202ENST00000394633 ASAP1Q9ULH1 1129 aa21.58■■□□□ 1.05
PCDHA1-202ENST00000394633 PFKFB2O60825 505 aa21.57■■□□□ 1.04
PCDHA1-202ENST00000394633 MARCH10Q8NA82 808 aaPredicted RBP21.57■■□□□ 1.04
PCDHA1-202ENST00000394633 CFAP45Q9UL16 551 aa21.57■■□□□ 1.04
PCDHA1-202ENST00000394633 SH3TC1Q8TE82 1336 aa21.57■■□□□ 1.04
PCDHA1-202ENST00000394633 ATP5J2-PTCD1G3V325 749 aa21.57■■□□□ 1.04
PCDHA1-202ENST00000394633 ZSCAN25Q6NSZ9 544 aa21.57■■□□□ 1.04
PCDHA1-202ENST00000394633 NSUN7Q8NE18 718 aaKnown RBP21.57■■□□□ 1.04
PCDHA1-202ENST00000394633 LAMB4A4D0S4 1761 aa21.57■■□□□ 1.04
PCDHA1-202ENST00000394633 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.57■■□□□ 1.04
PCDHA1-202ENST00000394633 CASP7P55210 303 aa21.56■■□□□ 1.04
PCDHA1-202ENST00000394633 MEX3CQ5U5Q3 659 aaKnown RBP21.56■■□□□ 1.04
PCDHA1-202ENST00000394633 KBTBD3Q8NAB2 608 aa21.56■■□□□ 1.04
PCDHA1-202ENST00000394633 SYTL4Q96C24 671 aaPredicted RBP21.56■■□□□ 1.04
PCDHA1-202ENST00000394633 LLPHQ9BRT6 129 aaKnown RBP21.56■■□□□ 1.04
PCDHA1-202ENST00000394633 CTDNEP1O95476 244 aa21.56■■□□□ 1.04
PCDHA1-202ENST00000394633 CEBPZQ03701 1054 aaKnown RBP21.56■■□□□ 1.04
PCDHA1-202ENST00000394633 BCL9O00512 1426 aa21.55■■□□□ 1.04
PCDHA1-202ENST00000394633 A0A087WZG4 1122 aa21.55■■□□□ 1.04
PCDHA1-202ENST00000394633 CTIFO43310 598 aaKnown RBP21.55■■□□□ 1.04
PCDHA1-202ENST00000394633 PALLDQ8WX93 1383 aa21.55■■□□□ 1.04
PCDHA1-202ENST00000394633 FOSBP53539 338 aa21.55■■□□□ 1.04
PCDHA1-202ENST00000394633 FGD1P98174 961 aa21.55■■□□□ 1.04
PCDHA1-202ENST00000394633 SLFNL1Q499Z3 407 aa21.55■■□□□ 1.04
PCDHA1-202ENST00000394633 IQCB1Q15051 598 aa21.54■■□□□ 1.04
PCDHA1-202ENST00000394633 NAA16Q6N069 864 aaPredicted RBP21.54■■□□□ 1.04
PCDHA1-202ENST00000394633 DHX32Q7L7V1 743 aaKnown RBP21.54■■□□□ 1.04
PCDHA1-202ENST00000394633 FTOQ9C0B1 505 aaKnown RBP eCLIP21.54■■□□□ 1.04
PCDHA1-202ENST00000394633 CLIP2Q9UDT6 1046 aa21.54■■□□□ 1.04
PCDHA1-202ENST00000394633 RCOR1Q9UKL0 485 aa21.54■■□□□ 1.04
PCDHA1-202ENST00000394633 AFF2P51816 1311 aa21.54■■□□□ 1.04
PCDHA1-202ENST00000394633 CAVIN2O95810 425 aa21.53■■□□□ 1.04
PCDHA1-202ENST00000394633 APOBRQ0VD83 1088 aa21.53■■□□□ 1.04
PCDHA1-202ENST00000394633 CCDC144BQ3MJ40 725 aa21.53■■□□□ 1.04
PCDHA1-202ENST00000394633 C11orf57Q6ZUT1 292 aaPredicted RBP21.53■■□□□ 1.04
PCDHA1-202ENST00000394633 CCDC144CPQ8IYA2 1237 aa21.53■■□□□ 1.04
PCDHA1-202ENST00000394633 CACTINQ8WUQ7 758 aaKnown RBP21.53■■□□□ 1.04
PCDHA1-202ENST00000394633 ANKRD7Q92527 254 aa21.53■■□□□ 1.04
PCDHA1-202ENST00000394633 ATG3Q9NT62 314 aa21.53■■□□□ 1.04
PCDHA1-202ENST00000394633 HMGB1P09429 215 aaKnown RBP21.53■■□□□ 1.04
PCDHA1-202ENST00000394633 CDC25BP30305 580 aa21.53■■□□□ 1.04
PCDHA1-202ENST00000394633 CCAR1Q8IX12 1150 aaKnown RBP21.53■■□□□ 1.04
PCDHA1-202ENST00000394633 GOLPH3LQ9H4A5 285 aa21.53■■□□□ 1.04
PCDHA1-202ENST00000394633 PRDM4Q9UKN5 801 aa21.53■■□□□ 1.04
PCDHA1-202ENST00000394633 PTPDC1A2A3K4 754 aa21.52■■□□□ 1.04
PCDHA1-202ENST00000394633 PPP4R3BQ5MIZ7 849 aa21.52■■□□□ 1.04
PCDHA1-202ENST00000394633 LMBR1LQ6UX01 489 aa21.52■■□□□ 1.04
PCDHA1-202ENST00000394633 ACSBG1Q96GR2 724 aa21.52■■□□□ 1.04
PCDHA1-202ENST00000394633 EXOSC10Q01780 885 aaKnown RBP21.52■■□□□ 1.04
PCDHA1-202ENST00000394633 C16orf45Q96MC5 204 aaPredicted RBP21.52■■□□□ 1.04
PCDHA1-202ENST00000394633 AGXT2Q9BYV1 514 aa21.52■■□□□ 1.04
PCDHA1-202ENST00000394633 A0A0G2JLW4 131 aa21.51■■□□□ 1.03
PCDHA1-202ENST00000394633 GOLIM4O00461 696 aa21.51■■□□□ 1.03
PCDHA1-202ENST00000394633 SARM1Q6SZW1 724 aa21.51■■□□□ 1.03
PCDHA1-202ENST00000394633 DSCC1Q9BVC3 393 aa21.51■■□□□ 1.03
PCDHA1-202ENST00000394633 PRDM10Q9NQV6 1147 aa21.51■■□□□ 1.03
PCDHA1-202ENST00000394633 HELLSQ9NRZ9 838 aa21.51■■□□□ 1.03
PCDHA1-202ENST00000394633 FOXO4P98177 505 aa21.51■■□□□ 1.03
PCDHA1-202ENST00000394633 PDCL2Q8N4E4 241 aa21.51■■□□□ 1.03
PCDHA1-202ENST00000394633 USP28Q96RU2 1077 aa21.51■■□□□ 1.03
PCDHA1-202ENST00000394633 PAG1Q9NWQ8 432 aa21.51■■□□□ 1.03
PCDHA1-202ENST00000394633 TJP1Q07157 1748 aa21.5■■□□□ 1.03
PCDHA1-202ENST00000394633 A0A0G2JS52 829 aa21.5■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms