RNA–Protein interactions for RNA: ENST00000394601.8

PTBP1-204, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 1 (best) BASIC

Gene PTBP1, Length 3,185 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-204ENST00000394601 CAMK4Q16566 473 aa18.32■□□□□ 0.52
PTBP1-204ENST00000394601 PUS3Q9BZE2 481 aaKnown RBP18.32■□□□□ 0.52
PTBP1-204ENST00000394601 ATG3Q9NT62 314 aa18.32■□□□□ 0.52
PTBP1-204ENST00000394601 U3KPZ7 1027 aaPredicted RBP18.32■□□□□ 0.52
PTBP1-204ENST00000394601 EXOSC10Q01780 885 aaKnown RBP18.32■□□□□ 0.52
PTBP1-204ENST00000394601 ZMYM1Q5SVZ6 1142 aa18.32■□□□□ 0.52
PTBP1-204ENST00000394601 FERMT3Q86UX7 667 aa18.32■□□□□ 0.52
PTBP1-204ENST00000394601 NHSL1Q5SYE7 1610 aa18.31■□□□□ 0.52
PTBP1-204ENST00000394601 CIAO1O76071 339 aa18.31■□□□□ 0.52
PTBP1-204ENST00000394601 KRT32Q14532 448 aa18.31■□□□□ 0.52
PTBP1-204ENST00000394601 Q6ZUG5 572 aa18.31■□□□□ 0.52
PTBP1-204ENST00000394601 PAG1Q9NWQ8 432 aa18.31■□□□□ 0.52
PTBP1-204ENST00000394601 CTDNEP1O95476 244 aa18.31■□□□□ 0.52
PTBP1-204ENST00000394601 IL15P40933 162 aaPredicted RBP18.31■□□□□ 0.52
PTBP1-204ENST00000394601 SCRN1Q12765 414 aa18.31■□□□□ 0.52
PTBP1-204ENST00000394601 TOM1L2Q6ZVM7 507 aa18.31■□□□□ 0.52
PTBP1-204ENST00000394601 TICAM2Q86XR7 235 aa18.31■□□□□ 0.52
PTBP1-204ENST00000394601 SMARCC2Q8TAQ2 1214 aa18.31■□□□□ 0.52
PTBP1-204ENST00000394601 ZBTB3Q9H5J0 574 aa18.31■□□□□ 0.52
PTBP1-204ENST00000394601 AKAP11Q9UKA4 1901 aa18.31■□□□□ 0.52
PTBP1-204ENST00000394601 EYA2O00167 538 aa18.3■□□□□ 0.52
PTBP1-204ENST00000394601 LIG1P18858 919 aa18.3■□□□□ 0.52
PTBP1-204ENST00000394601 STK3Q13188 491 aa18.3■□□□□ 0.52
PTBP1-204ENST00000394601 PRDM11Q9NQV5 511 aa18.3■□□□□ 0.52
PTBP1-204ENST00000394601 IL2RBP14784 551 aa18.3■□□□□ 0.52
PTBP1-204ENST00000394601 HELLSQ9NRZ9 838 aa18.3■□□□□ 0.52
PTBP1-204ENST00000394601 GOLIM4O00461 696 aa18.3■□□□□ 0.52
PTBP1-204ENST00000394601 LRMPQ12912 555 aa18.3■□□□□ 0.52
PTBP1-204ENST00000394601 RESTQ13127 1097 aa18.3■□□□□ 0.52
PTBP1-204ENST00000394601 FBXW7Q969H0 707 aa18.29■□□□□ 0.52
PTBP1-204ENST00000394601 DSCC1Q9BVC3 393 aa18.29■□□□□ 0.52
PTBP1-204ENST00000394601 PTGS1P23219 599 aa18.29■□□□□ 0.52
PTBP1-204ENST00000394601 ADD1P35611 737 aaKnown RBP18.29■□□□□ 0.52
PTBP1-204ENST00000394601 ST7Q9NRC1 585 aa18.29■□□□□ 0.52
PTBP1-204ENST00000394601 MYH7P12883 1935 aa18.29■□□□□ 0.52
PTBP1-204ENST00000394601 MAST3O60307 1309 aa18.29■□□□□ 0.52
PTBP1-204ENST00000394601 SALL1Q9NSC2 1324 aa18.29■□□□□ 0.52
PTBP1-204ENST00000394601 PDCP20941 246 aa18.28■□□□□ 0.52
PTBP1-204ENST00000394601 RBM43Q6ZSC3 357 aaKnown RBP18.28■□□□□ 0.52
PTBP1-204ENST00000394601 SYTL4Q96C24 671 aaPredicted RBP18.28■□□□□ 0.52
PTBP1-204ENST00000394601 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.28■□□□□ 0.52
PTBP1-204ENST00000394601 PGBD1Q96JS3 809 aa18.28■□□□□ 0.52
PTBP1-204ENST00000394601 ANKRD36CQ5JPF3 1778 aa18.28■□□□□ 0.52
PTBP1-204ENST00000394601 A0A1B0GUL7 405 aa18.28■□□□□ 0.52
PTBP1-204ENST00000394601 HSPD1P10809 573 aaKnown RBP18.28■□□□□ 0.52
PTBP1-204ENST00000394601 KRT85P78386 507 aa18.28■□□□□ 0.52
PTBP1-204ENST00000394601 LEO1Q8WVC0 666 aaPredicted RBP18.28■□□□□ 0.52
PTBP1-204ENST00000394601 LRRC2Q9BYS8 371 aa18.28■□□□□ 0.52
PTBP1-204ENST00000394601 M0R2C6 588 aa18.27■□□□□ 0.52
PTBP1-204ENST00000394601 PFKFB2O60825 505 aa18.27■□□□□ 0.52
PTBP1-204ENST00000394601 KDM4AO75164 1064 aa18.27■□□□□ 0.52
PTBP1-204ENST00000394601 TRIM28Q13263 835 aaKnown RBP18.27■□□□□ 0.51
PTBP1-204ENST00000394601 CCDC9Q9Y3X0 531 aaKnown RBP18.27■□□□□ 0.51
PTBP1-204ENST00000394601 RIC1Q4ADV7 1423 aa18.26■□□□□ 0.51
PTBP1-204ENST00000394601 MYO5AQ9Y4I1 1855 aaKnown RBP18.26■□□□□ 0.51
PTBP1-204ENST00000394601 TCIRG1Q13488 830 aa18.26■□□□□ 0.51
PTBP1-204ENST00000394601 NEUROD6Q96NK8 337 aa18.26■□□□□ 0.51
PTBP1-204ENST00000394601 PLA2G12BQ9BX93 195 aa18.26■□□□□ 0.51
PTBP1-204ENST00000394601 SLAIN2Q9P270 581 aa18.26■□□□□ 0.51
PTBP1-204ENST00000394601 LRP6O75581 1613 aa18.26■□□□□ 0.51
PTBP1-204ENST00000394601 CSF1RP07333 972 aa18.26■□□□□ 0.51
PTBP1-204ENST00000394601 NSUN7Q8NE18 718 aaKnown RBP18.26■□□□□ 0.51
PTBP1-204ENST00000394601 BRF1Q92994 677 aa18.26■□□□□ 0.51
PTBP1-204ENST00000394601 MYH3P11055 1940 aa18.25■□□□□ 0.51
PTBP1-204ENST00000394601 ADORA1P30542 326 aa18.25■□□□□ 0.51
PTBP1-204ENST00000394601 DHX32Q7L7V1 743 aaKnown RBP18.25■□□□□ 0.51
PTBP1-204ENST00000394601 OSBP2Q969R2 916 aa18.25■□□□□ 0.51
PTBP1-204ENST00000394601 FBXL16Q8N461 479 aa18.25■□□□□ 0.51
PTBP1-204ENST00000394601 TMX1Q9H3N1 280 aa18.25■□□□□ 0.51
PTBP1-204ENST00000394601 TFIP11Q9UBB9 837 aaKnown RBP18.25■□□□□ 0.51
PTBP1-204ENST00000394601 E7EWF7 191 aa18.24■□□□□ 0.51
PTBP1-204ENST00000394601 CKAP2LQ8IYA6 745 aa18.24■□□□□ 0.51
PTBP1-204ENST00000394601 MRVI1Q9Y6F6 885 aa18.24■□□□□ 0.51
PTBP1-204ENST00000394601 SLIT2O94813 1529 aa18.24■□□□□ 0.51
PTBP1-204ENST00000394601 RNF113AO15541 343 aaKnown RBP18.24■□□□□ 0.51
PTBP1-204ENST00000394601 SCARF1Q14162 830 aa18.24■□□□□ 0.51
PTBP1-204ENST00000394601 DDX11Q96FC9 970 aa18.24■□□□□ 0.51
PTBP1-204ENST00000394601 TPD52L1Q16890 204 aaPredicted RBP18.24■□□□□ 0.51
PTBP1-204ENST00000394601 PIGBQ92521 554 aa18.24■□□□□ 0.51
PTBP1-204ENST00000394601 TRIM34Q9BYJ4 488 aa18.24■□□□□ 0.51
PTBP1-204ENST00000394601 TRMT1Q9NXH9 659 aaKnown RBP18.24■□□□□ 0.51
PTBP1-204ENST00000394601 ASAP1Q9ULH1 1129 aa18.24■□□□□ 0.51
PTBP1-204ENST00000394601 DISP2A7MBM2 1401 aa18.23■□□□□ 0.51
PTBP1-204ENST00000394601 SLC4A9Q96Q91 983 aa18.23■□□□□ 0.51
PTBP1-204ENST00000394601 LLPHQ9BRT6 129 aaKnown RBP18.23■□□□□ 0.51
PTBP1-204ENST00000394601 SCAND2PQ9GZW5 306 aaPredicted RBP18.23■□□□□ 0.51
PTBP1-204ENST00000394601 NRBP1Q9UHY1 535 aa18.23■□□□□ 0.51
PTBP1-204ENST00000394601 TNNT1P13805 278 aa18.23■□□□□ 0.51
PTBP1-204ENST00000394601 EVCP57679 992 aa18.23■□□□□ 0.51
PTBP1-204ENST00000394601 IRX5P78411 483 aaPredicted RBP18.23■□□□□ 0.51
PTBP1-204ENST00000394601 CCDC186Q7Z3E2 898 aa18.23■□□□□ 0.51
PTBP1-204ENST00000394601 ILDR1Q86SU0 546 aaPredicted RBP18.23■□□□□ 0.51
PTBP1-204ENST00000394601 NUP98P52948 1817 aa18.22■□□□□ 0.51
PTBP1-204ENST00000394601 TNNT3P45378 269 aaPredicted RBP18.22■□□□□ 0.51
PTBP1-204ENST00000394601 TTLL5Q6EMB2 1281 aa18.22■□□□□ 0.51
PTBP1-204ENST00000394601 SYNE4Q8N205 404 aa18.22■□□□□ 0.51
PTBP1-204ENST00000394601 TAOK2Q9UL54 1235 aa18.22■□□□□ 0.51
PTBP1-204ENST00000394601 IFIT1P09914 478 aaKnown RBP18.22■□□□□ 0.51
PTBP1-204ENST00000394601 APOBRQ0VD83 1088 aa18.22■□□□□ 0.51
PTBP1-204ENST00000394601 NR1I2O75469 434 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms