RNA–Protein interactions for RNA: ENST00000394272.7

HDDC3-202, Transcript of HD domain containing 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene HDDC3, Length 1,880 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-202ENST00000394272 FKBP4Q02790 459 aaKnown RBP eCLIP24.57■■□□□ 1.52
HDDC3-202ENST00000394272 RBM17Q96I25 401 aaKnown RBP24.57■■□□□ 1.52
HDDC3-202ENST00000394272 ANTXR1Q9H6X2 564 aa24.57■■□□□ 1.52
HDDC3-202ENST00000394272 RAD50Q92878 1312 aa24.56■■□□□ 1.52
HDDC3-202ENST00000394272 MYH7P12883 1935 aa24.56■■□□□ 1.52
HDDC3-202ENST00000394272 A0A0D9SFI3 127 aa24.55■■□□□ 1.52
HDDC3-202ENST00000394272 ZAP70P43403 619 aa24.55■■□□□ 1.52
HDDC3-202ENST00000394272 PI16Q6UXB8 463 aa24.55■■□□□ 1.52
HDDC3-202ENST00000394272 WTIPA6NIX2 430 aaPredicted RBP24.55■■□□□ 1.52
HDDC3-202ENST00000394272 CRAMP1Q96RY5 1269 aa24.55■■□□□ 1.52
HDDC3-202ENST00000394272 COL11A2P13942 1736 aaPredicted RBP24.54■■□□□ 1.52
HDDC3-202ENST00000394272 LSG1Q9H089 658 aaKnown RBP24.54■■□□□ 1.52
HDDC3-202ENST00000394272 MED23Q9ULK4 1368 aa24.54■■□□□ 1.52
HDDC3-202ENST00000394272 ZNF804BA4D1E1 1349 aa24.54■■□□□ 1.52
HDDC3-202ENST00000394272 BCAMP50895 628 aa24.53■■□□□ 1.52
HDDC3-202ENST00000394272 MYO5AQ9Y4I1 1855 aaKnown RBP24.53■■□□□ 1.52
HDDC3-202ENST00000394272 PDGFDQ9GZP0 370 aaPredicted RBP24.53■■□□□ 1.52
HDDC3-202ENST00000394272 CHGBP05060 677 aa24.52■■□□□ 1.52
HDDC3-202ENST00000394272 HMG20BQ9P0W2 317 aa24.52■■□□□ 1.52
HDDC3-202ENST00000394272 BBOX1O75936 387 aa24.51■■□□□ 1.51
HDDC3-202ENST00000394272 SRGNP10124 158 aa24.51■■□□□ 1.51
HDDC3-202ENST00000394272 PDE6BP35913 854 aa24.51■■□□□ 1.51
HDDC3-202ENST00000394272 RASGRF1Q13972 1273 aa24.51■■□□□ 1.51
HDDC3-202ENST00000394272 LRRC37AA6NMS7 1700 aa24.51■■□□□ 1.51
HDDC3-202ENST00000394272 CYP2E1P05181 493 aaPredicted RBP24.51■■□□□ 1.51
HDDC3-202ENST00000394272 SLC51AQ86UW1 340 aa24.51■■□□□ 1.51
HDDC3-202ENST00000394272 DOCK2Q92608 1830 aa24.5■■□□□ 1.51
HDDC3-202ENST00000394272 KIAA1211Q6ZU35 1233 aa24.5■■□□□ 1.51
HDDC3-202ENST00000394272 SPATA5Q8NB90 893 aa24.5■■□□□ 1.51
HDDC3-202ENST00000394272 KCNJ4P48050 445 aa24.49■■□□□ 1.51
HDDC3-202ENST00000394272 FAM84BQ96KN1 310 aaPredicted RBP24.49■■□□□ 1.51
HDDC3-202ENST00000394272 IRS2Q9Y4H2 1338 aa24.49■■□□□ 1.51
HDDC3-202ENST00000394272 NPR1P16066 1061 aa24.49■■□□□ 1.51
HDDC3-202ENST00000394272 GYG1P46976 350 aa24.49■■□□□ 1.51
HDDC3-202ENST00000394272 TTF1Q15361 905 aaPredicted RBP24.49■■□□□ 1.51
HDDC3-202ENST00000394272 ZMYM1Q5SVZ6 1142 aa24.49■■□□□ 1.51
HDDC3-202ENST00000394272 ZNF589Q86UQ0 364 aaPredicted RBP24.49■■□□□ 1.51
HDDC3-202ENST00000394272 LEMD3Q9Y2U8 911 aa24.49■■□□□ 1.51
HDDC3-202ENST00000394272 XDHP47989 1333 aa24.49■■□□□ 1.51
HDDC3-202ENST00000394272 RNF113AO15541 343 aaKnown RBP24.48■■□□□ 1.51
HDDC3-202ENST00000394272 KLRK1P26718 216 aa24.48■■□□□ 1.51
HDDC3-202ENST00000394272 HSPA4P34932 840 aa24.48■■□□□ 1.51
HDDC3-202ENST00000394272 LRRFIP1Q32MZ4 808 aaKnown RBP24.48■■□□□ 1.51
HDDC3-202ENST00000394272 TMC4Q7Z404 712 aa24.48■■□□□ 1.51
HDDC3-202ENST00000394272 FBXO33Q7Z6M2 555 aa24.48■■□□□ 1.51
HDDC3-202ENST00000394272 CCDC171Q6TFL3 1326 aa24.48■■□□□ 1.51
HDDC3-202ENST00000394272 MCCP23508 829 aa24.47■■□□□ 1.51
HDDC3-202ENST00000394272 PTH1RQ03431 593 aa24.47■■□□□ 1.51
HDDC3-202ENST00000394272 MCMDC2Q4G0Z9 681 aa24.47■■□□□ 1.51
HDDC3-202ENST00000394272 CAVIN4Q5BKX8 364 aa24.47■■□□□ 1.51
HDDC3-202ENST00000394272 SLC16A10Q8TF71 515 aa24.47■■□□□ 1.51
HDDC3-202ENST00000394272 IL17RAQ96F46 866 aa24.47■■□□□ 1.51
HDDC3-202ENST00000394272 HELLSQ9NRZ9 838 aa24.47■■□□□ 1.51
HDDC3-202ENST00000394272 LTBP1Q14766 1721 aa24.47■■□□□ 1.51
HDDC3-202ENST00000394272 ZFYP08048 801 aaPredicted RBP24.47■■□□□ 1.51
HDDC3-202ENST00000394272 SLFNL1Q499Z3 407 aa24.47■■□□□ 1.51
HDDC3-202ENST00000394272 SEC62Q99442 399 aaKnown RBP24.47■■□□□ 1.51
HDDC3-202ENST00000394272 PIH1D3Q9NQM4 214 aaKnown RBP24.47■■□□□ 1.51
HDDC3-202ENST00000394272 ANKIB1Q9P2G1 1089 aa24.47■■□□□ 1.51
HDDC3-202ENST00000394272 MYH13Q9UKX3 1938 aa24.47■■□□□ 1.51
HDDC3-202ENST00000394272 ANAPC15P60006 121 aa24.46■■□□□ 1.51
HDDC3-202ENST00000394272 GNL3LQ9NVN8 582 aaKnown RBP24.46■■□□□ 1.51
HDDC3-202ENST00000394272 PALD1Q9ULE6 856 aa24.46■■□□□ 1.51
HDDC3-202ENST00000394272 MAP4K1Q92918 833 aa24.45■■□□□ 1.51
HDDC3-202ENST00000394272 MASTLQ96GX5 879 aa24.45■■□□□ 1.51
HDDC3-202ENST00000394272 COL1A1P02452 1464 aaPredicted RBP24.45■■□□□ 1.5
HDDC3-202ENST00000394272 ZBTB22O15209 634 aa24.45■■□□□ 1.5
HDDC3-202ENST00000394272 GPSM2P81274 684 aa24.45■■□□□ 1.5
HDDC3-202ENST00000394272 PPEF1O14829 653 aaPredicted RBP24.44■■□□□ 1.5
HDDC3-202ENST00000394272 ALDH1B1P30837 517 aa24.44■■□□□ 1.5
HDDC3-202ENST00000394272 RABEP1Q15276 862 aa24.44■■□□□ 1.5
HDDC3-202ENST00000394272 DDX24Q9GZR7 859 aaKnown RBP eCLIP24.44■■□□□ 1.5
HDDC3-202ENST00000394272 PODXL2Q9NZ53 605 aa24.44■■□□□ 1.5
HDDC3-202ENST00000394272 BECN1Q14457 450 aa24.43■■□□□ 1.5
HDDC3-202ENST00000394272 C15orf52Q6ZUT6 534 aaKnown RBP24.43■■□□□ 1.5
HDDC3-202ENST00000394272 TXNRD3Q86VQ6 643 aa24.43■■□□□ 1.5
HDDC3-202ENST00000394272 VPS37DQ86XT2 251 aa24.43■■□□□ 1.5
HDDC3-202ENST00000394272 SP8Q8IXZ3 490 aa24.43■■□□□ 1.5
HDDC3-202ENST00000394272 TBC1D2Q9BYX2 928 aa24.43■■□□□ 1.5
HDDC3-202ENST00000394272 CACNA1SQ13698 1873 aa24.43■■□□□ 1.5
HDDC3-202ENST00000394272 MAST3O60307 1309 aa24.43■■□□□ 1.5
HDDC3-202ENST00000394272 ADD2P35612 726 aa24.43■■□□□ 1.5
HDDC3-202ENST00000394272 CCDC129Q6ZRS4 1044 aa24.43■■□□□ 1.5
HDDC3-202ENST00000394272 SNX21Q969T3 373 aa24.43■■□□□ 1.5
HDDC3-202ENST00000394272 ATP6V0A2Q9Y487 856 aa24.43■■□□□ 1.5
HDDC3-202ENST00000394272 SEMA3EO15041 775 aa24.42■■□□□ 1.5
HDDC3-202ENST00000394272 HIBADHP31937 336 aaKnown RBP24.42■■□□□ 1.5
HDDC3-202ENST00000394272 ZSCAN25Q6NSZ9 544 aa24.42■■□□□ 1.5
HDDC3-202ENST00000394272 OSBP2Q969R2 916 aa24.42■■□□□ 1.5
HDDC3-202ENST00000394272 NSFL1CQ9UNZ2 370 aaKnown RBP24.42■■□□□ 1.5
HDDC3-202ENST00000394272 IQSEC3Q9UPP2 1182 aaPredicted RBP24.42■■□□□ 1.5
HDDC3-202ENST00000394272 ATP2B4P23634 1241 aa24.41■■□□□ 1.5
HDDC3-202ENST00000394272 C2CD5Q86YS7 1000 aa24.41■■□□□ 1.5
HDDC3-202ENST00000394272 APPBP2Q92624 585 aa24.41■■□□□ 1.5
HDDC3-202ENST00000394272 DENND2AQ9ULE3 1009 aa24.41■■□□□ 1.5
HDDC3-202ENST00000394272 PDS5AQ29RF7 1337 aaKnown RBP24.41■■□□□ 1.5
HDDC3-202ENST00000394272 IDH1O75874 414 aaKnown RBP24.41■■□□□ 1.5
HDDC3-202ENST00000394272 SLC4A3P48751 1232 aa24.41■■□□□ 1.5
HDDC3-202ENST00000394272 NECTIN1Q15223 517 aa24.41■■□□□ 1.5
HDDC3-202ENST00000394272 KCNB2Q92953 911 aa24.41■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms