RNA–Protein interactions for RNA: ENST00000393860.7

RAB5C-202, Transcript of RAB5C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5C, Length 1,912 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-202ENST00000393860 UPF3BQ9BZI7 483 aaKnown RBP23.68■■□□□ 1.38
RAB5C-202ENST00000393860 MINPP1Q9UNW1 487 aa23.68■■□□□ 1.38
RAB5C-202ENST00000393860 RPS8P62241 208 aaKnown RBP23.67■■□□□ 1.38
RAB5C-202ENST00000393860 MCMDC2Q4G0Z9 681 aa23.67■■□□□ 1.38
RAB5C-202ENST00000393860 SLC51AQ86UW1 340 aa23.67■■□□□ 1.38
RAB5C-202ENST00000393860 RNF113AO15541 343 aaKnown RBP23.67■■□□□ 1.38
RAB5C-202ENST00000393860 ST18O60284 1047 aa23.67■■□□□ 1.38
RAB5C-202ENST00000393860 ARID4AP29374 1257 aaPredicted RBP23.67■■□□□ 1.38
RAB5C-202ENST00000393860 BCAMP50895 628 aa23.67■■□□□ 1.38
RAB5C-202ENST00000393860 MYO5AQ9Y4I1 1855 aaKnown RBP23.66■■□□□ 1.38
RAB5C-202ENST00000393860 MAP4K1Q92918 833 aa23.66■■□□□ 1.38
RAB5C-202ENST00000393860 ZNF512BQ96KM6 892 aaPredicted RBP23.66■■□□□ 1.38
RAB5C-202ENST00000393860 CYP2E1P05181 493 aaPredicted RBP23.65■■□□□ 1.38
RAB5C-202ENST00000393860 UQCRFS1P1P0C7P4 283 aa23.65■■□□□ 1.38
RAB5C-202ENST00000393860 ZMYM1Q5SVZ6 1142 aa23.65■■□□□ 1.38
RAB5C-202ENST00000393860 PIH1D3Q9NQM4 214 aaKnown RBP23.65■■□□□ 1.38
RAB5C-202ENST00000393860 POLRMTO00411 1230 aaKnown RBP23.65■■□□□ 1.38
RAB5C-202ENST00000393860 ST5P78524 1137 aa23.65■■□□□ 1.38
RAB5C-202ENST00000393860 HMG20BQ9P0W2 317 aa23.65■■□□□ 1.38
RAB5C-202ENST00000393860 MYH7P12883 1935 aa23.64■■□□□ 1.38
RAB5C-202ENST00000393860 M0R2C6 588 aa23.64■■□□□ 1.37
RAB5C-202ENST00000393860 EN1Q05925 392 aaPredicted RBP23.64■■□□□ 1.37
RAB5C-202ENST00000393860 RASGRF1Q13972 1273 aa23.64■■□□□ 1.37
RAB5C-202ENST00000393860 NBR1Q14596 966 aa23.64■■□□□ 1.37
RAB5C-202ENST00000393860 NECTIN1Q15223 517 aa23.64■■□□□ 1.37
RAB5C-202ENST00000393860 EZH2Q15910 746 aaKnown RBP23.64■■□□□ 1.37
RAB5C-202ENST00000393860 CREB3L3Q68CJ9 461 aa23.64■■□□□ 1.37
RAB5C-202ENST00000393860 NOL8Q76FK4 1167 aaKnown RBP23.64■■□□□ 1.37
RAB5C-202ENST00000393860 IL17RAQ96F46 866 aa23.64■■□□□ 1.37
RAB5C-202ENST00000393860 MAST3O60307 1309 aa23.63■■□□□ 1.37
RAB5C-202ENST00000393860 HELLSQ9NRZ9 838 aa23.63■■□□□ 1.37
RAB5C-202ENST00000393860 IQSEC3Q9UPP2 1182 aaPredicted RBP23.63■■□□□ 1.37
RAB5C-202ENST00000393860 RGPD3A6NKT7 1758 aaPredicted RBP23.63■■□□□ 1.37
RAB5C-202ENST00000393860 RGPD4Q7Z3J3 1758 aa23.63■■□□□ 1.37
RAB5C-202ENST00000393860 GYG1P46976 350 aa23.63■■□□□ 1.37
RAB5C-202ENST00000393860 SLC27A2O14975 620 aa23.62■■□□□ 1.37
RAB5C-202ENST00000393860 HSP90AA1P07900 732 aaKnown RBP23.62■■□□□ 1.37
RAB5C-202ENST00000393860 CPA1P15085 419 aa23.62■■□□□ 1.37
RAB5C-202ENST00000393860 HMGB2P26583 209 aaKnown RBP23.62■■□□□ 1.37
RAB5C-202ENST00000393860 WASHC4Q2M389 1173 aa23.62■■□□□ 1.37
RAB5C-202ENST00000393860 SPATA5Q8NB90 893 aa23.62■■□□□ 1.37
RAB5C-202ENST00000393860 OSBP2Q969R2 916 aa23.62■■□□□ 1.37
RAB5C-202ENST00000393860 ANP32EQ9BTT0 268 aa23.62■■□□□ 1.37
RAB5C-202ENST00000393860 PNPLA7Q6ZV29 1317 aa23.61■■□□□ 1.37
RAB5C-202ENST00000393860 ADCK5Q3MIX3 580 aa23.61■■□□□ 1.37
RAB5C-202ENST00000393860 VPS53Q5VIR6 699 aa23.61■■□□□ 1.37
RAB5C-202ENST00000393860 TAF6LQ9Y6J9 622 aa23.61■■□□□ 1.37
RAB5C-202ENST00000393860 IDH1O75874 414 aaKnown RBP23.61■■□□□ 1.37
RAB5C-202ENST00000393860 KLRK1P26718 216 aa23.61■■□□□ 1.37
RAB5C-202ENST00000393860 MSL1Q68DK7 614 aa23.61■■□□□ 1.37
RAB5C-202ENST00000393860 RPGRQ92834 1020 aaKnown RBP23.61■■□□□ 1.37
RAB5C-202ENST00000393860 GRAPQ13588 217 aa23.6■■□□□ 1.37
RAB5C-202ENST00000393860 UBE4AQ14139 1066 aa23.6■■□□□ 1.37
RAB5C-202ENST00000393860 GRAPLQ8TC17 118 aaPredicted RBP23.6■■□□□ 1.37
RAB5C-202ENST00000393860 JAKMIP1Q96N16 626 aaKnown RBP23.6■■□□□ 1.37
RAB5C-202ENST00000393860 ANO8Q9HCE9 1232 aaPredicted RBP23.6■■□□□ 1.37
RAB5C-202ENST00000393860 CASTP20810 708 aaKnown RBP23.59■■□□□ 1.37
RAB5C-202ENST00000393860 TTF1Q15361 905 aaPredicted RBP23.59■■□□□ 1.37
RAB5C-202ENST00000393860 KCNB2Q92953 911 aa23.59■■□□□ 1.37
RAB5C-202ENST00000393860 ZFYP08048 801 aaPredicted RBP23.58■■□□□ 1.37
RAB5C-202ENST00000393860 LRRFIP1Q32MZ4 808 aaKnown RBP23.58■■□□□ 1.37
RAB5C-202ENST00000393860 DDX24Q9GZR7 859 aaKnown RBP eCLIP23.58■■□□□ 1.37
RAB5C-202ENST00000393860 WWC3Q9ULE0 1092 aa23.58■■□□□ 1.37
RAB5C-202ENST00000393860 ZKSCAN1P17029 563 aaPredicted RBP23.57■■□□□ 1.36
RAB5C-202ENST00000393860 SLC9C2Q5TAH2 1124 aa23.57■■□□□ 1.36
RAB5C-202ENST00000393860 CAMKK2Q96RR4 588 aa23.57■■□□□ 1.36
RAB5C-202ENST00000393860 PUS7LQ9H0K6 701 aaKnown RBP23.57■■□□□ 1.36
RAB5C-202ENST00000393860 ADD2P35612 726 aa23.57■■□□□ 1.36
RAB5C-202ENST00000393860 TICAM2Q86XR7 235 aa23.57■■□□□ 1.36
RAB5C-202ENST00000393860 NLGN1Q8N2Q7 840 aa23.57■■□□□ 1.36
RAB5C-202ENST00000393860 APPBP2Q92624 585 aa23.57■■□□□ 1.36
RAB5C-202ENST00000393860 ANKRD2Q9GZV1 360 aa23.57■■□□□ 1.36
RAB5C-202ENST00000393860 ANKRD31Q8N7Z5 1873 aa23.56■■□□□ 1.36
RAB5C-202ENST00000393860 COL9A3Q14050 684 aaPredicted RBP23.56■■□□□ 1.36
RAB5C-202ENST00000393860 CRY2Q49AN0 593 aa23.56■■□□□ 1.36
RAB5C-202ENST00000393860 FLAD1Q8NFF5 587 aa23.56■■□□□ 1.36
RAB5C-202ENST00000393860 U3KPZ7 1027 aaPredicted RBP23.56■■□□□ 1.36
RAB5C-202ENST00000393860 DOCK2Q92608 1830 aa23.56■■□□□ 1.36
RAB5C-202ENST00000393860 COL1A1P02452 1464 aaPredicted RBP23.55■■□□□ 1.36
RAB5C-202ENST00000393860 RNF20Q5VTR2 975 aa23.55■■□□□ 1.36
RAB5C-202ENST00000393860 ZNF804BA4D1E1 1349 aa23.55■■□□□ 1.36
RAB5C-202ENST00000393860 HSPD1P10809 573 aaKnown RBP23.55■■□□□ 1.36
RAB5C-202ENST00000393860 PDE6AP16499 860 aa23.55■■□□□ 1.36
RAB5C-202ENST00000393860 CAVIN4Q5BKX8 364 aa23.55■■□□□ 1.36
RAB5C-202ENST00000393860 VPS37DQ86XT2 251 aa23.55■■□□□ 1.36
RAB5C-202ENST00000393860 FAM84BQ96KN1 310 aaPredicted RBP23.55■■□□□ 1.36
RAB5C-202ENST00000393860 LARP6Q9BRS8 491 aaKnown RBP23.55■■□□□ 1.36
RAB5C-202ENST00000393860 ZNF532Q9HCE3 1301 aa23.54■■□□□ 1.36
RAB5C-202ENST00000393860 A0A0G2JLW4 131 aa23.54■■□□□ 1.36
RAB5C-202ENST00000393860 MMP10P09238 476 aa23.54■■□□□ 1.36
RAB5C-202ENST00000393860 ZSCAN25Q6NSZ9 544 aa23.54■■□□□ 1.36
RAB5C-202ENST00000393860 RBM17Q96I25 401 aaKnown RBP23.54■■□□□ 1.36
RAB5C-202ENST00000393860 TMX3Q96JJ7 454 aa23.54■■□□□ 1.36
RAB5C-202ENST00000393860 TTC14Q96N46 770 aa23.53■■□□□ 1.36
RAB5C-202ENST00000393860 ANKIB1Q9P2G1 1089 aa23.53■■□□□ 1.36
RAB5C-202ENST00000393860 DDIT3P35638 169 aa23.53■■□□□ 1.36
RAB5C-202ENST00000393860 AK2P54819 239 aa23.53■■□□□ 1.36
RAB5C-202ENST00000393860 DSCC1Q9BVC3 393 aa23.53■■□□□ 1.36
RAB5C-202ENST00000393860 GNL3LQ9NVN8 582 aaKnown RBP23.53■■□□□ 1.36
RAB5C-202ENST00000393860 CHMP5Q9NZZ3 219 aa23.53■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms