RNA–Protein interactions for RNA: ENST00000392770.6

SCN3B-202, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 6,061 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-202ENST00000392770 NSFL1CQ9UNZ2 370 aaKnown RBP19.13■□□□□ 0.65
SCN3B-202ENST00000392770 JAG2Q9Y219 1238 aa19.13■□□□□ 0.65
SCN3B-202ENST00000392770 ABCA6Q8N139 1617 aa19.13■□□□□ 0.65
SCN3B-202ENST00000392770 DNM1Q05193 864 aaKnown RBP19.13■□□□□ 0.65
SCN3B-202ENST00000392770 EHMT1Q9H9B1 1298 aa19.13■□□□□ 0.65
SCN3B-202ENST00000392770 DHX32Q7L7V1 743 aaKnown RBP19.13■□□□□ 0.65
SCN3B-202ENST00000392770 EPB41L2O43491 1005 aaKnown RBP19.13■□□□□ 0.65
SCN3B-202ENST00000392770 PDCL3Q9H2J4 239 aa19.13■□□□□ 0.65
SCN3B-202ENST00000392770 CPA1P15085 419 aa19.12■□□□□ 0.65
SCN3B-202ENST00000392770 GIMAP6Q6P9H5 292 aa19.12■□□□□ 0.65
SCN3B-202ENST00000392770 RTL9Q8NET4 1388 aa19.12■□□□□ 0.65
SCN3B-202ENST00000392770 ERCC4Q92889 916 aaPredicted RBP19.12■□□□□ 0.65
SCN3B-202ENST00000392770 CAMSAP1Q5T5Y3 1602 aa19.12■□□□□ 0.65
SCN3B-202ENST00000392770 TNNT3P45378 269 aaPredicted RBP19.12■□□□□ 0.65
SCN3B-202ENST00000392770 SEPT11Q9NVA2 429 aaKnown RBP19.12■□□□□ 0.65
SCN3B-202ENST00000392770 SLC27A2O14975 620 aa19.12■□□□□ 0.65
SCN3B-202ENST00000392770 RIMBP2O15034 1052 aa19.12■□□□□ 0.65
SCN3B-202ENST00000392770 MBD4O95243 580 aa19.12■□□□□ 0.65
SCN3B-202ENST00000392770 SFPQP23246 707 aaKnown RBP eCLIP19.12■□□□□ 0.65
SCN3B-202ENST00000392770 ISM2Q6H9L7 571 aa19.11■□□□□ 0.65
SCN3B-202ENST00000392770 LRSAM1Q6UWE0 723 aa19.11■□□□□ 0.65
SCN3B-202ENST00000392770 FEZ1Q99689 392 aa19.11■□□□□ 0.65
SCN3B-202ENST00000392770 ZNF397Q8NF99 534 aaPredicted RBP19.11■□□□□ 0.65
SCN3B-202ENST00000392770 CALML4Q96GE6 196 aa19.11■□□□□ 0.65
SCN3B-202ENST00000392770 TCP11L1Q9NUJ3 509 aa19.11■□□□□ 0.65
SCN3B-202ENST00000392770 ADGRB3O60242 1522 aa19.11■□□□□ 0.65
SCN3B-202ENST00000392770 FAM227BQ96M60 508 aa19.11■□□□□ 0.65
SCN3B-202ENST00000392770 DENND2AQ9ULE3 1009 aa19.11■□□□□ 0.65
SCN3B-202ENST00000392770 TOP1P11387 765 aaKnown RBP19.11■□□□□ 0.65
SCN3B-202ENST00000392770 CNBD1Q8NA66 436 aa19.11■□□□□ 0.65
SCN3B-202ENST00000392770 MYO1BO43795 1136 aa19.11■□□□□ 0.65
SCN3B-202ENST00000392770 MCM9Q9NXL9 1143 aa19.11■□□□□ 0.65
SCN3B-202ENST00000392770 LDHBP07195 334 aaKnown RBP19.1■□□□□ 0.65
SCN3B-202ENST00000392770 HEATR3Q7Z4Q2 680 aa19.1■□□□□ 0.65
SCN3B-202ENST00000392770 CCDC181Q5TID7 509 aa19.1■□□□□ 0.65
SCN3B-202ENST00000392770 UQCRHLA0A096LP55 91 aa19.1■□□□□ 0.65
SCN3B-202ENST00000392770 UQCRHP07919 91 aa19.1■□□□□ 0.65
SCN3B-202ENST00000392770 RPS6KB1P23443 525 aa19.1■□□□□ 0.65
SCN3B-202ENST00000392770 SNX14Q9Y5W7 946 aa19.1■□□□□ 0.65
SCN3B-202ENST00000392770 CDC42BPGQ6DT37 1551 aa19.1■□□□□ 0.65
SCN3B-202ENST00000392770 PTPDC1A2A3K4 754 aa19.1■□□□□ 0.65
SCN3B-202ENST00000392770 ADCY5O95622 1261 aa19.1■□□□□ 0.65
SCN3B-202ENST00000392770 RBM10P98175 930 aaKnown RBP19.1■□□□□ 0.65
SCN3B-202ENST00000392770 CCDC102BQ68D86 513 aa19.1■□□□□ 0.65
SCN3B-202ENST00000392770 KCNG4Q8TDN1 519 aa19.1■□□□□ 0.65
SCN3B-202ENST00000392770 UBA5Q9GZZ9 404 aa19.1■□□□□ 0.65
SCN3B-202ENST00000392770 ZNF521Q96K83 1311 aa19.1■□□□□ 0.65
SCN3B-202ENST00000392770 FKBP15Q5T1M5 1219 aa19.09■□□□□ 0.65
SCN3B-202ENST00000392770 KIAA1328Q86T90 577 aa19.09■□□□□ 0.65
SCN3B-202ENST00000392770 ARHGEF25Q86VW2 580 aa19.09■□□□□ 0.65
SCN3B-202ENST00000392770 INTS4Q96HW7 963 aaKnown RBP19.09■□□□□ 0.65
SCN3B-202ENST00000392770 MTERF4Q7Z6M4 381 aaKnown RBP19.09■□□□□ 0.65
SCN3B-202ENST00000392770 CNKSR2Q8WXI2 1034 aa19.09■□□□□ 0.65
SCN3B-202ENST00000392770 USP44Q9H0E7 712 aa19.09■□□□□ 0.65
SCN3B-202ENST00000392770 MYO6Q9UM54 1294 aa19.09■□□□□ 0.65
SCN3B-202ENST00000392770 SYKP43405 635 aa19.09■□□□□ 0.65
SCN3B-202ENST00000392770 KANK3Q6NY19 840 aa19.09■□□□□ 0.65
SCN3B-202ENST00000392770 TTLL12Q14166 644 aaPredicted RBP19.08■□□□□ 0.65
SCN3B-202ENST00000392770 PYM1Q9BRP8 204 aaKnown RBP19.08■□□□□ 0.65
SCN3B-202ENST00000392770 NDUFB9Q9Y6M9 179 aa19.08■□□□□ 0.65
SCN3B-202ENST00000392770 HDAC9Q9UKV0 1011 aa19.08■□□□□ 0.64
SCN3B-202ENST00000392770 PPP1R12BO60237 982 aaPredicted RBP19.08■□□□□ 0.64
SCN3B-202ENST00000392770 TAF5LO75529 589 aa19.08■□□□□ 0.64
SCN3B-202ENST00000392770 RXRAP19793 462 aa19.08■□□□□ 0.64
SCN3B-202ENST00000392770 ZC3H12CQ9C0D7 883 aaKnown RBP19.08■□□□□ 0.64
SCN3B-202ENST00000392770 CALM1P0DP23 149 aa19.08■□□□□ 0.64
SCN3B-202ENST00000392770 CALM2P0DP24 149 aa19.08■□□□□ 0.64
SCN3B-202ENST00000392770 CALM3P0DP25 149 aa19.08■□□□□ 0.64
SCN3B-202ENST00000392770 BEND3Q5T5X7 828 aa19.08■□□□□ 0.64
SCN3B-202ENST00000392770 USP21Q9UK80 565 aa19.08■□□□□ 0.64
SCN3B-202ENST00000392770 SGSM2O43147 1006 aa19.07■□□□□ 0.64
SCN3B-202ENST00000392770 ZNF165P49910 485 aa19.07■□□□□ 0.64
SCN3B-202ENST00000392770 CDR1P51861 262 aa19.07■□□□□ 0.64
SCN3B-202ENST00000392770 CCDC148Q8NFR7 591 aa19.07■□□□□ 0.64
SCN3B-202ENST00000392770 AMPD3Q01432 767 aa19.07■□□□□ 0.64
SCN3B-202ENST00000392770 ARMT1Q9H993 441 aa19.07■□□□□ 0.64
SCN3B-202ENST00000392770 UVSSAQ2YD98 709 aa19.07■□□□□ 0.64
SCN3B-202ENST00000392770 MRPS27Q92552 414 aaKnown RBP19.06■□□□□ 0.64
SCN3B-202ENST00000392770 KAT6BQ8WYB5 2073 aa19.06■□□□□ 0.64
SCN3B-202ENST00000392770 MARCKSP29966 332 aaPredicted RBP19.06■□□□□ 0.64
SCN3B-202ENST00000392770 UBA7P41226 1012 aa19.06■□□□□ 0.64
SCN3B-202ENST00000392770 GNAQP50148 359 aa19.06■□□□□ 0.64
SCN3B-202ENST00000392770 ARHGAP29Q52LW3 1261 aa19.06■□□□□ 0.64
SCN3B-202ENST00000392770 ZKSCAN3Q9BRR0 538 aa19.06■□□□□ 0.64
SCN3B-202ENST00000392770 PPRC1Q5VV67 1664 aaKnown RBP19.06■□□□□ 0.64
SCN3B-202ENST00000392770 PLCG2P16885 1265 aa19.06■□□□□ 0.64
SCN3B-202ENST00000392770 TCIRG1Q13488 830 aa19.06■□□□□ 0.64
SCN3B-202ENST00000392770 FGFR1OPO95684 399 aaKnown RBP19.05■□□□□ 0.64
SCN3B-202ENST00000392770 ANKARQ7Z5J8 1434 aa19.05■□□□□ 0.64
SCN3B-202ENST00000392770 HIBADHP31937 336 aaKnown RBP19.05■□□□□ 0.64
SCN3B-202ENST00000392770 TMC6Q7Z403 805 aa19.05■□□□□ 0.64
SCN3B-202ENST00000392770 MROH5Q6ZUA9 1318 aa19.05■□□□□ 0.64
SCN3B-202ENST00000392770 SSH3Q8TE77 659 aa19.05■□□□□ 0.64
SCN3B-202ENST00000392770 MAP7D2Q96T17 732 aa19.05■□□□□ 0.64
SCN3B-202ENST00000392770 CLTCQ00610 1675 aaKnown RBP19.05■□□□□ 0.64
SCN3B-202ENST00000392770 TTLL7Q6ZT98 887 aa19.05■□□□□ 0.64
SCN3B-202ENST00000392770 UFL1O94874 794 aa19.04■□□□□ 0.64
SCN3B-202ENST00000392770 GSPT1P15170 499 aaKnown RBP19.04■□□□□ 0.64
SCN3B-202ENST00000392770 LPIN2Q92539 896 aa19.04■□□□□ 0.64
SCN3B-202ENST00000392770 PPP4R3BQ5MIZ7 849 aa19.04■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms