RNA–Protein interactions for RNA: ENST00000391867.7

MRPL55-219, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 3 BASIC

Gene MRPL55, Length 685 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-219ENST00000391867 EGFRP00533 1210 aa16.42■□□□□ 0.22
MRPL55-219ENST00000391867 VIL1P09327 827 aaKnown RBP16.42■□□□□ 0.22
MRPL55-219ENST00000391867 RLBP1P12271 317 aa16.42■□□□□ 0.22
MRPL55-219ENST00000391867 RFX5P48382 616 aaPredicted RBP16.42■□□□□ 0.22
MRPL55-219ENST00000391867 RBM26Q5T8P6 1007 aaKnown RBP16.42■□□□□ 0.22
MRPL55-219ENST00000391867 SAMD7Q7Z3H4 446 aa16.42■□□□□ 0.22
MRPL55-219ENST00000391867 PODNQ7Z5L7 613 aa16.42■□□□□ 0.22
MRPL55-219ENST00000391867 COA1Q9GZY4 146 aa16.42■□□□□ 0.22
MRPL55-219ENST00000391867 RIPOR2Q9Y4F9 1068 aa16.42■□□□□ 0.22
MRPL55-219ENST00000391867 IRS2Q9Y4H2 1338 aa16.42■□□□□ 0.22
MRPL55-219ENST00000391867 USP17L3A6NCW0 530 aa16.41■□□□□ 0.22
MRPL55-219ENST00000391867 USP17L4A6NCW7 530 aa16.41■□□□□ 0.22
MRPL55-219ENST00000391867 HIRAP54198 1017 aaPredicted RBP16.41■□□□□ 0.22
MRPL55-219ENST00000391867 TBC1D10BQ4KMP7 808 aaPredicted RBP16.41■□□□□ 0.22
MRPL55-219ENST00000391867 METTL24Q5JXM2 366 aa16.41■□□□□ 0.22
MRPL55-219ENST00000391867 RSBN1LQ6PCB5 846 aaPredicted RBP16.41■□□□□ 0.22
MRPL55-219ENST00000391867 USP50Q70EL3 339 aaPredicted RBP16.41■□□□□ 0.22
MRPL55-219ENST00000391867 USP17L1Q7RTZ2 530 aa16.41■□□□□ 0.22
MRPL55-219ENST00000391867 FTSJ3Q8IY81 847 aaKnown RBP16.41■□□□□ 0.22
MRPL55-219ENST00000391867 YTHDC1Q96MU7 727 aaKnown RBP16.41■□□□□ 0.22
MRPL55-219ENST00000391867 SIL1Q9H173 461 aa16.41■□□□□ 0.22
MRPL55-219ENST00000391867 H7C1D1 291 aa16.4■□□□□ 0.22
MRPL55-219ENST00000391867 GNAI3P08754 354 aa16.4■□□□□ 0.22
MRPL55-219ENST00000391867 FMR1Q06787 632 aaKnown RBP eCLIP16.4■□□□□ 0.22
MRPL55-219ENST00000391867 DZIP1LQ8IYY4 767 aaKnown RBP16.4■□□□□ 0.22
MRPL55-219ENST00000391867 CNTROBQ8N137 903 aa16.4■□□□□ 0.22
MRPL55-219ENST00000391867 DPF2Q92785 391 aa16.4■□□□□ 0.22
MRPL55-219ENST00000391867 PA2G4Q9UQ80 394 aaKnown RBP16.4■□□□□ 0.22
MRPL55-219ENST00000391867 JAG2Q9Y219 1238 aa16.4■□□□□ 0.22
MRPL55-219ENST00000391867 MROH5Q6ZUA9 1318 aa16.4■□□□□ 0.22
MRPL55-219ENST00000391867 PSME4Q14997 1843 aa16.4■□□□□ 0.22
MRPL55-219ENST00000391867 ITGBL1O95965 494 aaPredicted RBP16.39■□□□□ 0.21
MRPL55-219ENST00000391867 RPS12P25398 132 aaKnown RBP16.39■□□□□ 0.21
MRPL55-219ENST00000391867 GYG1P46976 350 aa16.39■□□□□ 0.21
MRPL55-219ENST00000391867 PTPN12Q05209 780 aaKnown RBP16.39■□□□□ 0.21
MRPL55-219ENST00000391867 ITPRIPQ8IWB1 547 aa16.39■□□□□ 0.21
MRPL55-219ENST00000391867 CD209Q9NNX6 404 aa16.39■□□□□ 0.21
MRPL55-219ENST00000391867 EYA2O00167 538 aa16.38■□□□□ 0.21
MRPL55-219ENST00000391867 TRAF5O00463 557 aa16.38■□□□□ 0.21
MRPL55-219ENST00000391867 GTF2IP78347 998 aa16.38■□□□□ 0.21
MRPL55-219ENST00000391867 DACT2Q5SW24 774 aa16.38■□□□□ 0.21
MRPL55-219ENST00000391867 C15orf52Q6ZUT6 534 aaKnown RBP16.38■□□□□ 0.21
MRPL55-219ENST00000391867 ZNF804AQ7Z570 1209 aa16.38■□□□□ 0.21
MRPL55-219ENST00000391867 VGLL2Q8N8G2 317 aa16.38■□□□□ 0.21
MRPL55-219ENST00000391867 PANK1Q8TE04 598 aa16.38■□□□□ 0.21
MRPL55-219ENST00000391867 PASKQ96RG2 1323 aa16.38■□□□□ 0.21
MRPL55-219ENST00000391867 ZNF646O15015 1829 aaPredicted RBP16.38■□□□□ 0.21
MRPL55-219ENST00000391867 UBE4AQ14139 1066 aa16.37■□□□□ 0.21
MRPL55-219ENST00000391867 KIF4BQ2VIQ3 1234 aa16.37■□□□□ 0.21
MRPL55-219ENST00000391867 TTLL5Q6EMB2 1281 aa16.37■□□□□ 0.21
MRPL55-219ENST00000391867 AGBL3Q8NEM8 1001 aa16.37■□□□□ 0.21
MRPL55-219ENST00000391867 GMLQ99445 158 aa16.37■□□□□ 0.21
MRPL55-219ENST00000391867 C1orf115Q9H7X2 142 aa16.37■□□□□ 0.21
MRPL55-219ENST00000391867 RCAN3Q9UKA8 241 aa16.37■□□□□ 0.21
MRPL55-219ENST00000391867 HDAC5Q9UQL6 1122 aa16.37■□□□□ 0.21
MRPL55-219ENST00000391867 ASTN2O75129 1339 aaPredicted RBP16.37■□□□□ 0.21
MRPL55-219ENST00000391867 SRGAP3O43295 1099 aa16.36■□□□□ 0.21
MRPL55-219ENST00000391867 PDE8BO95263 885 aa16.36■□□□□ 0.21
MRPL55-219ENST00000391867 STRIP1Q5VSL9 837 aa16.36■□□□□ 0.21
MRPL55-219ENST00000391867 ATG9AQ7Z3C6 839 aa16.36■□□□□ 0.21
MRPL55-219ENST00000391867 GLIS2Q9BZE0 524 aaPredicted RBP16.36■□□□□ 0.21
MRPL55-219ENST00000391867 IQSEC3Q9UPP2 1182 aaPredicted RBP16.36■□□□□ 0.21
MRPL55-219ENST00000391867 GNAI2P04899 355 aa16.35■□□□□ 0.21
MRPL55-219ENST00000391867 USP17L8P0C7I0 530 aa16.35■□□□□ 0.21
MRPL55-219ENST00000391867 DLK2Q6UY11 383 aa16.35■□□□□ 0.21
MRPL55-219ENST00000391867 FAM84BQ96KN1 310 aaPredicted RBP16.35■□□□□ 0.21
MRPL55-219ENST00000391867 ZNF609O15014 1411 aa16.35■□□□□ 0.21
MRPL55-219ENST00000391867 PNMA6EA0A0J9YXQ4 647 aa16.34■□□□□ 0.21
MRPL55-219ENST00000391867 IL1R1P14778 569 aa16.34■□□□□ 0.21
MRPL55-219ENST00000391867 HIBADHP31937 336 aaKnown RBP16.34■□□□□ 0.21
MRPL55-219ENST00000391867 ZNF280AP59817 542 aaPredicted RBP16.34■□□□□ 0.21
MRPL55-219ENST00000391867 KIAA0825Q8IV33 1275 aa16.34■□□□□ 0.21
MRPL55-219ENST00000391867 CERS5Q8N5B7 392 aa16.34■□□□□ 0.21
MRPL55-219ENST00000391867 DNAJC5GQ8N7S2 189 aa16.34■□□□□ 0.21
MRPL55-219ENST00000391867 F8W031 263 aaPredicted RBP16.33■□□□□ 0.2
MRPL55-219ENST00000391867 PUM3Q15397 648 aaKnown RBP16.33■□□□□ 0.2
MRPL55-219ENST00000391867 VPS37DQ86XT2 251 aa16.33■□□□□ 0.2
MRPL55-219ENST00000391867 MYOZ2Q9NPC6 264 aa16.33■□□□□ 0.2
MRPL55-219ENST00000391867 GGA3Q9NZ52 723 aa16.33■□□□□ 0.2
MRPL55-219ENST00000391867 TMEM88BA6NKF7 163 aa16.32■□□□□ 0.2
MRPL55-219ENST00000391867 CIAO1O76071 339 aa16.32■□□□□ 0.2
MRPL55-219ENST00000391867 FGFR2P21802 821 aa16.32■□□□□ 0.2
MRPL55-219ENST00000391867 BCAMP50895 628 aa16.32■□□□□ 0.2
MRPL55-219ENST00000391867 MTX1Q13505 466 aa16.32■□□□□ 0.2
MRPL55-219ENST00000391867 USP48Q86UV5 1035 aa16.32■□□□□ 0.2
MRPL55-219ENST00000391867 TDRD7Q8NHU6 1098 aaKnown RBP16.32■□□□□ 0.2
MRPL55-219ENST00000391867 ZC3H15Q8WU90 426 aaKnown RBP16.32■□□□□ 0.2
MRPL55-219ENST00000391867 MYO3BQ8WXR4 1341 aa16.32■□□□□ 0.2
MRPL55-219ENST00000391867 ZNF408Q9H9D4 720 aa16.32■□□□□ 0.2
MRPL55-219ENST00000391867 COPRSQ9NQ92 184 aa16.32■□□□□ 0.2
MRPL55-219ENST00000391867 CREBZFQ9NS37 354 aa16.32■□□□□ 0.2
MRPL55-219ENST00000391867 MKRN1Q9UHC7 482 aaKnown RBP16.32■□□□□ 0.2
MRPL55-219ENST00000391867 PGAP2Q9UHJ9 254 aa16.32■□□□□ 0.2
MRPL55-219ENST00000391867 SCAF8Q9UPN6 1271 aaKnown RBP16.32■□□□□ 0.2
MRPL55-219ENST00000391867 ADM5C9JUS6 153 aa16.31■□□□□ 0.2
MRPL55-219ENST00000391867 ZBTB7BO15156 539 aaPredicted RBP16.31■□□□□ 0.2
MRPL55-219ENST00000391867 SASH1O94885 1247 aa16.31■□□□□ 0.2
MRPL55-219ENST00000391867 IFIT1P09914 478 aaKnown RBP16.31■□□□□ 0.2
MRPL55-219ENST00000391867 CHAF1AQ13111 956 aaPredicted RBP16.31■□□□□ 0.2
MRPL55-219ENST00000391867 SCARF1Q14162 830 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms