RNA–Protein interactions for RNA: ENST00000390612.3

IGHV4-28-201, Transcript of immunoglobulin heavy variable 4-28, humanhuman

APPRIS P1 BASIC

Gene IGHV4-28, Length 425 nt, Biotype IG V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28-201ENST00000390612 RSBN1LQ6PCB5 846 aaPredicted RBP14.33□□□□□ -0.12
IGHV4-28-201ENST00000390612 MICALL2Q8IY33 904 aa14.33□□□□□ -0.12
IGHV4-28-201ENST00000390612 AGBL3Q8NEM8 1001 aa14.33□□□□□ -0.12
IGHV4-28-201ENST00000390612 HELBQ8NG08 1087 aaPredicted RBP14.33□□□□□ -0.12
IGHV4-28-201ENST00000390612 TRPM4Q8TD43 1214 aa14.33□□□□□ -0.12
IGHV4-28-201ENST00000390612 PUS3Q9BZE2 481 aaKnown RBP14.33□□□□□ -0.12
IGHV4-28-201ENST00000390612 USP17L3A6NCW0 530 aa14.32□□□□□ -0.12
IGHV4-28-201ENST00000390612 USP17L4A6NCW7 530 aa14.32□□□□□ -0.12
IGHV4-28-201ENST00000390612 G3V3G9 751 aa14.32□□□□□ -0.12
IGHV4-28-201ENST00000390612 TRIM27P14373 513 aa14.32□□□□□ -0.12
IGHV4-28-201ENST00000390612 RFX5P48382 616 aaPredicted RBP14.32□□□□□ -0.12
IGHV4-28-201ENST00000390612 ZNF280AP59817 542 aaPredicted RBP14.32□□□□□ -0.12
IGHV4-28-201ENST00000390612 DACT2Q5SW24 774 aa14.32□□□□□ -0.12
IGHV4-28-201ENST00000390612 DCAF8Q5TAQ9 597 aa14.32□□□□□ -0.12
IGHV4-28-201ENST00000390612 USP17L1Q7RTZ2 530 aa14.32□□□□□ -0.12
IGHV4-28-201ENST00000390612 KLRG1Q96E93 195 aa14.32□□□□□ -0.12
IGHV4-28-201ENST00000390612 CREBZFQ9NS37 354 aa14.32□□□□□ -0.12
IGHV4-28-201ENST00000390612 IPO8O15397 1037 aaKnown RBP14.31□□□□□ -0.12
IGHV4-28-201ENST00000390612 EGFRP00533 1210 aa14.31□□□□□ -0.12
IGHV4-28-201ENST00000390612 TAF7LQ5H9L4 462 aa14.31□□□□□ -0.12
IGHV4-28-201ENST00000390612 STRIP1Q5VSL9 837 aa14.31□□□□□ -0.12
IGHV4-28-201ENST00000390612 ATF7IPQ6VMQ6 1270 aa14.31□□□□□ -0.12
IGHV4-28-201ENST00000390612 SAMD7Q7Z3H4 446 aa14.31□□□□□ -0.12
IGHV4-28-201ENST00000390612 JMYQ8N9B5 988 aa14.31□□□□□ -0.12
IGHV4-28-201ENST00000390612 CD209Q9NNX6 404 aa14.31□□□□□ -0.12
IGHV4-28-201ENST00000390612 CNNM1Q9NRU3 951 aa14.31□□□□□ -0.12
IGHV4-28-201ENST00000390612 TNNQ9UQP3 1299 aa14.31□□□□□ -0.12
IGHV4-28-201ENST00000390612 UBE4AQ14139 1066 aa14.3□□□□□ -0.12
IGHV4-28-201ENST00000390612 VGLL2Q8N8G2 317 aa14.3□□□□□ -0.12
IGHV4-28-201ENST00000390612 MEIS3Q99687 375 aa14.3□□□□□ -0.12
IGHV4-28-201ENST00000390612 UBTFL1P0CB47 393 aaPredicted RBP14.29□□□□□ -0.12
IGHV4-28-201ENST00000390612 IL1R1P14778 569 aa14.29□□□□□ -0.12
IGHV4-28-201ENST00000390612 KCNJ4P48050 445 aa14.29□□□□□ -0.12
IGHV4-28-201ENST00000390612 PTPN12Q05209 780 aaKnown RBP14.29□□□□□ -0.12
IGHV4-28-201ENST00000390612 FMR1Q06787 632 aaKnown RBP eCLIP14.29□□□□□ -0.12
IGHV4-28-201ENST00000390612 LRRC24Q50LG9 513 aa14.29□□□□□ -0.12
IGHV4-28-201ENST00000390612 MROH5Q6ZUA9 1318 aa14.29□□□□□ -0.12
IGHV4-28-201ENST00000390612 TMEM88BA6NKF7 163 aa14.28□□□□□ -0.12
IGHV4-28-201ENST00000390612 MMP14P50281 582 aa14.28□□□□□ -0.12
IGHV4-28-201ENST00000390612 TBC1D10BQ4KMP7 808 aaPredicted RBP14.28□□□□□ -0.12
IGHV4-28-201ENST00000390612 CST9Q5W186 159 aa14.28□□□□□ -0.12
IGHV4-28-201ENST00000390612 TTLL5Q6EMB2 1281 aa14.28□□□□□ -0.12
IGHV4-28-201ENST00000390612 KLHDC4Q8TBB5 520 aa14.28□□□□□ -0.12
IGHV4-28-201ENST00000390612 LRRFIP2Q9Y608 721 aaKnown RBP14.28□□□□□ -0.12
IGHV4-28-201ENST00000390612 MYO3BQ8WXR4 1341 aa14.27□□□□□ -0.12
IGHV4-28-201ENST00000390612 TRAF5O00463 557 aa14.27□□□□□ -0.13
IGHV4-28-201ENST00000390612 PLIN1O60240 522 aa14.27□□□□□ -0.13
IGHV4-28-201ENST00000390612 USP17L8P0C7I0 530 aa14.27□□□□□ -0.13
IGHV4-28-201ENST00000390612 ZKSCAN2Q63HK3 967 aa14.27□□□□□ -0.13
IGHV4-28-201ENST00000390612 ATG9AQ7Z3C6 839 aa14.27□□□□□ -0.13
IGHV4-28-201ENST00000390612 FAM84BQ96KN1 310 aaPredicted RBP14.27□□□□□ -0.13
IGHV4-28-201ENST00000390612 MXD3Q9BW11 206 aa14.27□□□□□ -0.13
IGHV4-28-201ENST00000390612 GLIS2Q9BZE0 524 aaPredicted RBP14.27□□□□□ -0.13
IGHV4-28-201ENST00000390612 FBXO3Q9UK99 471 aa14.27□□□□□ -0.13
IGHV4-28-201ENST00000390612 HDAC5Q9UQL6 1122 aa14.27□□□□□ -0.13
IGHV4-28-201ENST00000390612 CNTNAP1P78357 1384 aa14.26□□□□□ -0.13
IGHV4-28-201ENST00000390612 EYA2O00167 538 aa14.26□□□□□ -0.13
IGHV4-28-201ENST00000390612 PDE8BO95263 885 aa14.26□□□□□ -0.13
IGHV4-28-201ENST00000390612 GNAI3P08754 354 aa14.26□□□□□ -0.13
IGHV4-28-201ENST00000390612 FGFR2P21802 821 aa14.26□□□□□ -0.13
IGHV4-28-201ENST00000390612 FKBP1AP62942 108 aaKnown RBP14.26□□□□□ -0.13
IGHV4-28-201ENST00000390612 GTF2IP78347 998 aa14.26□□□□□ -0.13
IGHV4-28-201ENST00000390612 MTX1Q13505 466 aa14.26□□□□□ -0.13
IGHV4-28-201ENST00000390612 KIF4BQ2VIQ3 1234 aa14.26□□□□□ -0.13
IGHV4-28-201ENST00000390612 CDC37L1Q7L3B6 337 aa14.26□□□□□ -0.13
IGHV4-28-201ENST00000390612 FBXO33Q7Z6M2 555 aa14.26□□□□□ -0.13
IGHV4-28-201ENST00000390612 CERS5Q8N5B7 392 aa14.26□□□□□ -0.13
IGHV4-28-201ENST00000390612 TDRD7Q8NHU6 1098 aaKnown RBP14.26□□□□□ -0.13
IGHV4-28-201ENST00000390612 FRAT1Q92837 279 aaPredicted RBP14.26□□□□□ -0.13
IGHV4-28-201ENST00000390612 ECM29Q5VYK3 1845 aa14.26□□□□□ -0.13
IGHV4-28-201ENST00000390612 MYH13Q9UKX3 1938 aa14.25□□□□□ -0.13
IGHV4-28-201ENST00000390612 FAM205AQ6ZU69 1335 aa14.25□□□□□ -0.13
IGHV4-28-201ENST00000390612 RASSF10A6NK89 507 aa14.25□□□□□ -0.13
IGHV4-28-201ENST00000390612 SASH1O94885 1247 aa14.25□□□□□ -0.13
IGHV4-28-201ENST00000390612 RBM26Q5T8P6 1007 aaKnown RBP14.25□□□□□ -0.13
IGHV4-28-201ENST00000390612 ZNF804AQ7Z570 1209 aa14.25□□□□□ -0.13
IGHV4-28-201ENST00000390612 ZBED3Q96IU2 234 aaPredicted RBP14.25□□□□□ -0.13
IGHV4-28-201ENST00000390612 MYOZ2Q9NPC6 264 aa14.25□□□□□ -0.13
IGHV4-28-201ENST00000390612 COPRSQ9NQ92 184 aa14.25□□□□□ -0.13
IGHV4-28-201ENST00000390612 ARAP2Q8WZ64 1704 aa14.24□□□□□ -0.13
IGHV4-28-201ENST00000390612 ASTN2O75129 1339 aaPredicted RBP14.24□□□□□ -0.13
IGHV4-28-201ENST00000390612 CIAO1O76071 339 aa14.24□□□□□ -0.13
IGHV4-28-201ENST00000390612 HIBADHP31937 336 aaKnown RBP14.24□□□□□ -0.13
IGHV4-28-201ENST00000390612 METTL24Q5JXM2 366 aa14.24□□□□□ -0.13
IGHV4-28-201ENST00000390612 TMEM57Q8N5G2 664 aa14.24□□□□□ -0.13
IGHV4-28-201ENST00000390612 CLUAP1Q96AJ1 413 aa14.24□□□□□ -0.13
IGHV4-28-201ENST00000390612 RLBP1P12271 317 aa14.23□□□□□ -0.13
IGHV4-28-201ENST00000390612 GYG1P46976 350 aa14.23□□□□□ -0.13
IGHV4-28-201ENST00000390612 SCARF1Q14162 830 aa14.23□□□□□ -0.13
IGHV4-28-201ENST00000390612 USP48Q86UV5 1035 aa14.23□□□□□ -0.13
IGHV4-28-201ENST00000390612 PITPNM2Q9BZ72 1349 aa14.22□□□□□ -0.13
IGHV4-28-201ENST00000390612 DLK2Q6UY11 383 aa14.22□□□□□ -0.13
IGHV4-28-201ENST00000390612 KRT26Q7Z3Y9 468 aa14.22□□□□□ -0.13
IGHV4-28-201ENST00000390612 MTMR14Q8NCE2 650 aa14.22□□□□□ -0.13
IGHV4-28-201ENST00000390612 DCPSQ96C86 337 aaKnown RBP14.22□□□□□ -0.13
IGHV4-28-201ENST00000390612 GGA3Q9NZ52 723 aa14.22□□□□□ -0.13
IGHV4-28-201ENST00000390612 MKRN1Q9UHC7 482 aaKnown RBP14.22□□□□□ -0.13
IGHV4-28-201ENST00000390612 TLL2Q9Y6L7 1015 aa14.22□□□□□ -0.13
IGHV4-28-201ENST00000390612 WNT10BO00744 389 aa14.21□□□□□ -0.13
IGHV4-28-201ENST00000390612 ZBTB22O15209 634 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms