RNA–Protein interactions for RNA: ENST00000390423.2

TRAV1-2-201, Transcript of T cell receptor alpha variable 1-2, humanhuman

APPRIS P1 BASIC

Gene TRAV1-2, Length 402 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-2-201ENST00000390423 U2AF1Q01081 240 aaKnown RBP eCLIP8.28□□□□□ -1.08
TRAV1-2-201ENST00000390423 SP3Q02447 781 aa8.28□□□□□ -1.08
TRAV1-2-201ENST00000390423 AIMP1Q12904 312 aaKnown RBP8.28□□□□□ -1.08
TRAV1-2-201ENST00000390423 SF3B3Q15393 1217 aaKnown RBP8.28□□□□□ -1.08
TRAV1-2-201ENST00000390423 RTL5Q5HYW3 569 aaPredicted RBP8.28□□□□□ -1.08
TRAV1-2-201ENST00000390423 DCAF8Q5TAQ9 597 aa8.28□□□□□ -1.08
TRAV1-2-201ENST00000390423 COPS6Q7L5N1 327 aa8.28□□□□□ -1.08
TRAV1-2-201ENST00000390423 ARMC9Q7Z3E5 817 aa8.28□□□□□ -1.08
TRAV1-2-201ENST00000390423 XAGE3Q8WTP9 111 aa8.28□□□□□ -1.08
TRAV1-2-201ENST00000390423 NECTIN2Q92692 538 aa8.28□□□□□ -1.08
TRAV1-2-201ENST00000390423 FAM89AQ96GI7 184 aa8.28□□□□□ -1.08
TRAV1-2-201ENST00000390423 ERBB4Q15303 1308 aa8.28□□□□□ -1.08
TRAV1-2-201ENST00000390423 USP17L3A6NCW0 530 aa8.27□□□□□ -1.09
TRAV1-2-201ENST00000390423 USP17L4A6NCW7 530 aa8.27□□□□□ -1.09
TRAV1-2-201ENST00000390423 USP17L1Q7RTZ2 530 aa8.27□□□□□ -1.09
TRAV1-2-201ENST00000390423 SLC10A4Q96EP9 437 aa8.27□□□□□ -1.09
TRAV1-2-201ENST00000390423 ARHGAP39Q9C0H5 1083 aa8.27□□□□□ -1.09
TRAV1-2-201ENST00000390423 SEC31BQ9NQW1 1179 aa8.27□□□□□ -1.09
TRAV1-2-201ENST00000390423 PODXL2Q9NZ53 605 aa8.27□□□□□ -1.09
TRAV1-2-201ENST00000390423 ATP5J2-PTCD1G3V325 749 aa8.26□□□□□ -1.09
TRAV1-2-201ENST00000390423 ZBTB48P10074 688 aaPredicted RBP8.26□□□□□ -1.09
TRAV1-2-201ENST00000390423 INHBEP58166 350 aa8.26□□□□□ -1.09
TRAV1-2-201ENST00000390423 RPS8P62241 208 aaKnown RBP8.26□□□□□ -1.09
TRAV1-2-201ENST00000390423 MTFR1Q15390 333 aa8.26□□□□□ -1.09
TRAV1-2-201ENST00000390423 HSP90AB3PQ58FF7 597 aa8.26□□□□□ -1.09
TRAV1-2-201ENST00000390423 DACT2Q5SW24 774 aa8.26□□□□□ -1.09
TRAV1-2-201ENST00000390423 Q7L0L9 218 aa8.26□□□□□ -1.09
TRAV1-2-201ENST00000390423 PNISRQ8TF01 805 aaKnown RBP8.26□□□□□ -1.09
TRAV1-2-201ENST00000390423 ANKIB1Q9P2G1 1089 aa8.26□□□□□ -1.09
TRAV1-2-201ENST00000390423 GGA1Q9UJY5 639 aa8.26□□□□□ -1.09
TRAV1-2-201ENST00000390423 OTOFQ9HC10 1997 aa8.26□□□□□ -1.09
TRAV1-2-201ENST00000390423 ZBTB7BO15156 539 aaPredicted RBP8.25□□□□□ -1.09
TRAV1-2-201ENST00000390423 ECM2O94769 699 aaPredicted RBP8.25□□□□□ -1.09
TRAV1-2-201ENST00000390423 PPP2R1AP30153 589 aa8.25□□□□□ -1.09
TRAV1-2-201ENST00000390423 UBE2Q1Q7Z7E8 422 aa8.25□□□□□ -1.09
TRAV1-2-201ENST00000390423 NBPF11Q86T75 865 aa8.25□□□□□ -1.09
TRAV1-2-201ENST00000390423 CFAP53Q96M91 514 aa8.25□□□□□ -1.09
TRAV1-2-201ENST00000390423 ZEB1P37275 1124 aaPredicted RBP8.24□□□□□ -1.09
TRAV1-2-201ENST00000390423 MAP3K11Q16584 847 aa8.24□□□□□ -1.09
TRAV1-2-201ENST00000390423 APOBEC3FQ8IUX4 373 aaKnown RBP8.24□□□□□ -1.09
TRAV1-2-201ENST00000390423 CNKSR2Q8WXI2 1034 aa8.24□□□□□ -1.09
TRAV1-2-201ENST00000390423 FBXW7Q969H0 707 aa8.24□□□□□ -1.09
TRAV1-2-201ENST00000390423 ZBED3Q96IU2 234 aaPredicted RBP8.24□□□□□ -1.09
TRAV1-2-201ENST00000390423 CCDC85AQ96PX6 553 aaPredicted RBP8.24□□□□□ -1.09
TRAV1-2-201ENST00000390423 DEFB129Q9H1M3 183 aa8.24□□□□□ -1.09
TRAV1-2-201ENST00000390423 STAP2Q9UGK3 403 aa8.24□□□□□ -1.09
TRAV1-2-201ENST00000390423 PCDHAC2Q9Y5I4 1007 aa8.24□□□□□ -1.09
TRAV1-2-201ENST00000390423 VCANP13611 3396 aa8.24□□□□□ -1.09
TRAV1-2-201ENST00000390423 AOX1Q06278 1338 aa8.24□□□□□ -1.09
TRAV1-2-201ENST00000390423 TESPA1A2RU30 521 aaPredicted RBP8.23□□□□□ -1.09
TRAV1-2-201ENST00000390423 IRS4O14654 1257 aaPredicted RBP8.23□□□□□ -1.09
TRAV1-2-201ENST00000390423 KRT24Q2M2I5 525 aa8.23□□□□□ -1.09
TRAV1-2-201ENST00000390423 KIAA0825Q8IV33 1275 aa8.23□□□□□ -1.09
TRAV1-2-201ENST00000390423 OGFOD1Q8N543 542 aa8.23□□□□□ -1.09
TRAV1-2-201ENST00000390423 DEFB123Q8N688 67 aa8.23□□□□□ -1.09
TRAV1-2-201ENST00000390423 BRI3BPQ8WY22 251 aa8.23□□□□□ -1.09
TRAV1-2-201ENST00000390423 MS4A4AQ96JQ5 239 aa8.23□□□□□ -1.09
TRAV1-2-201ENST00000390423 ISCA1Q9BUE6 129 aa8.23□□□□□ -1.09
TRAV1-2-201ENST00000390423 COL1A1P02452 1464 aaPredicted RBP8.22□□□□□ -1.09
TRAV1-2-201ENST00000390423 KLRK1P26718 216 aa8.22□□□□□ -1.09
TRAV1-2-201ENST00000390423 CTGFP29279 349 aa8.22□□□□□ -1.09
TRAV1-2-201ENST00000390423 DDX10Q13206 875 aaKnown RBP8.22□□□□□ -1.09
TRAV1-2-201ENST00000390423 TAF1CQ15572 869 aaPredicted RBP8.22□□□□□ -1.09
TRAV1-2-201ENST00000390423 NBPF12Q5TAG4 269 aaPredicted RBP8.22□□□□□ -1.09
TRAV1-2-201ENST00000390423 OTUD7BQ6GQQ9 843 aa8.22□□□□□ -1.09
TRAV1-2-201ENST00000390423 PODNQ7Z5L7 613 aa8.22□□□□□ -1.09
TRAV1-2-201ENST00000390423 TXNRD3Q86VQ6 643 aa8.22□□□□□ -1.09
TRAV1-2-201ENST00000390423 FAM43AQ8N2R8 423 aa8.22□□□□□ -1.09
TRAV1-2-201ENST00000390423 JARID2Q92833 1246 aaPredicted RBP8.22□□□□□ -1.09
TRAV1-2-201ENST00000390423 OPTNQ96CV9 577 aa8.22□□□□□ -1.09
TRAV1-2-201ENST00000390423 ELP3Q9H9T3 547 aa8.22□□□□□ -1.09
TRAV1-2-201ENST00000390423 TSPYL4Q9UJ04 414 aa8.22□□□□□ -1.09
TRAV1-2-201ENST00000390423 NUDCQ9Y266 331 aa8.22□□□□□ -1.09
TRAV1-2-201ENST00000390423 STXBP5LQ9Y2K9 1186 aa8.22□□□□□ -1.09
TRAV1-2-201ENST00000390423 XDHP47989 1333 aa8.22□□□□□ -1.09
TRAV1-2-201ENST00000390423 SPEF2Q9C093 1822 aa8.22□□□□□ -1.09
TRAV1-2-201ENST00000390423 A0A1W2PPC1 479 aa8.21□□□□□ -1.1
TRAV1-2-201ENST00000390423 CLRN2A0PK11 232 aa8.21□□□□□ -1.1
TRAV1-2-201ENST00000390423 USP2O75604 605 aaPredicted RBP8.21□□□□□ -1.1
TRAV1-2-201ENST00000390423 CDAN1Q8IWY9 1227 aa8.21□□□□□ -1.1
TRAV1-2-201ENST00000390423 CHPF2Q9P2E5 772 aa8.21□□□□□ -1.1
TRAV1-2-201ENST00000390423 MED23Q9ULK4 1368 aa8.21□□□□□ -1.1
TRAV1-2-201ENST00000390423 SPTBN5Q9NRC6 3674 aaKnown RBP8.2□□□□□ -1.1
TRAV1-2-201ENST00000390423 CCL15-CCL14A0A0B4J2E2 113 aa8.2□□□□□ -1.1
TRAV1-2-201ENST00000390423 PPP1R12BO60237 982 aaPredicted RBP8.2□□□□□ -1.1
TRAV1-2-201ENST00000390423 CCL5P13501 91 aa8.2□□□□□ -1.1
TRAV1-2-201ENST00000390423 ATP2B4P23634 1241 aa8.2□□□□□ -1.1
TRAV1-2-201ENST00000390423 GJA8P48165 433 aa8.2□□□□□ -1.1
TRAV1-2-201ENST00000390423 LACTBP83111 547 aaPredicted RBP8.2□□□□□ -1.1
TRAV1-2-201ENST00000390423 NFE2L2Q16236 605 aa8.2□□□□□ -1.1
TRAV1-2-201ENST00000390423 CCL15Q16663 113 aa8.2□□□□□ -1.1
TRAV1-2-201ENST00000390423 STRIP1Q5VSL9 837 aa8.2□□□□□ -1.1
TRAV1-2-201ENST00000390423 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.2□□□□□ -1.1
TRAV1-2-201ENST00000390423 PLBD2Q8NHP8 589 aa8.2□□□□□ -1.1
TRAV1-2-201ENST00000390423 PLEKHF1Q96S99 279 aa8.2□□□□□ -1.1
TRAV1-2-201ENST00000390423 HTATIP2Q9BUP3 242 aa8.2□□□□□ -1.1
TRAV1-2-201ENST00000390423 MTMR10Q9NXD2 777 aa8.2□□□□□ -1.1
TRAV1-2-201ENST00000390423 NR2E3Q9Y5X4 410 aa8.2□□□□□ -1.1
TRAV1-2-201ENST00000390423 ALPK3Q96L96 1907 aa8.2□□□□□ -1.1
TRAV1-2-201ENST00000390423 ECM29Q5VYK3 1845 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms