RNA–Protein interactions for RNA: ENST00000389757.7

PKP4-201, Transcript of plakophilin 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PKP4, Length 5,777 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-201ENST00000389757 ROBO2Q9HCK4 1378 aa11.83□□□□□ -0.52
PKP4-201ENST00000389757 TEX35Q5T0J7 233 aa11.83□□□□□ -0.52
PKP4-201ENST00000389757 CCDC24Q8N4L8 307 aa11.83□□□□□ -0.52
PKP4-201ENST00000389757 WDR66Q8TBY9 1149 aa11.83□□□□□ -0.52
PKP4-201ENST00000389757 GRPEL1Q9HAV7 217 aa11.83□□□□□ -0.52
PKP4-201ENST00000389757 FAM135BQ49AJ0 1406 aa11.83□□□□□ -0.52
PKP4-201ENST00000389757 ZBTB7BO15156 539 aaPredicted RBP11.83□□□□□ -0.52
PKP4-201ENST00000389757 PLS1Q14651 629 aa11.83□□□□□ -0.52
PKP4-201ENST00000389757 SH2D4AQ9H788 454 aa11.83□□□□□ -0.52
PKP4-201ENST00000389757 ZNF335Q9H4Z2 1342 aaPredicted RBP11.83□□□□□ -0.52
PKP4-201ENST00000389757 ERLIN2O94905 339 aa11.82□□□□□ -0.52
PKP4-201ENST00000389757 PDE6BP35913 854 aa11.82□□□□□ -0.52
PKP4-201ENST00000389757 TCIRG1Q13488 830 aa11.82□□□□□ -0.52
PKP4-201ENST00000389757 CACNA2D4Q7Z3S7 1137 aa11.82□□□□□ -0.52
PKP4-201ENST00000389757 RRP36Q96EU6 259 aaKnown RBP11.82□□□□□ -0.52
PKP4-201ENST00000389757 XAGE2Q96GT9 111 aa11.82□□□□□ -0.52
PKP4-201ENST00000389757 ZNF594Q96JF6 807 aaPredicted RBP11.82□□□□□ -0.52
PKP4-201ENST00000389757 TMX3Q96JJ7 454 aa11.82□□□□□ -0.52
PKP4-201ENST00000389757 C6orf50Q9HD87 102 aa11.82□□□□□ -0.52
PKP4-201ENST00000389757 CETN1Q12798 172 aa11.82□□□□□ -0.52
PKP4-201ENST00000389757 HELLSQ9NRZ9 838 aa11.82□□□□□ -0.52
PKP4-201ENST00000389757 KANK3Q6NY19 840 aa11.82□□□□□ -0.52
PKP4-201ENST00000389757 ARHGEF25Q86VW2 580 aa11.82□□□□□ -0.52
PKP4-201ENST00000389757 CKAP2LQ8IYA6 745 aa11.82□□□□□ -0.52
PKP4-201ENST00000389757 LPIN2Q92539 896 aa11.82□□□□□ -0.52
PKP4-201ENST00000389757 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.82□□□□□ -0.522e-8■■□□□ 14.2
PKP4-201ENST00000389757 KIAA1328Q86T90 577 aa11.82□□□□□ -0.52
PKP4-201ENST00000389757 SMC5Q8IY18 1101 aa11.82□□□□□ -0.52
PKP4-201ENST00000389757 SUCLG2Q96I99 432 aa11.82□□□□□ -0.52
PKP4-201ENST00000389757 PANK2Q9BZ23 570 aa11.82□□□□□ -0.52
PKP4-201ENST00000389757 TBCAO75347 108 aaKnown RBP11.81□□□□□ -0.52
PKP4-201ENST00000389757 VPS36Q86VN1 386 aa11.81□□□□□ -0.52
PKP4-201ENST00000389757 RXRBP28702 533 aa11.81□□□□□ -0.52
PKP4-201ENST00000389757 SSR1P43307 286 aaKnown RBP11.81□□□□□ -0.52
PKP4-201ENST00000389757 MPNDQ8N594 471 aa11.81□□□□□ -0.52
PKP4-201ENST00000389757 TMEM87AQ8NBN3 555 aa11.81□□□□□ -0.52
PKP4-201ENST00000389757 KLHDC4Q8TBB5 520 aa11.81□□□□□ -0.52
PKP4-201ENST00000389757 DBNDD2Q9BQY9 259 aa11.81□□□□□ -0.52
PKP4-201ENST00000389757 KDM5CP41229 1560 aa11.81□□□□□ -0.52
PKP4-201ENST00000389757 MROH5Q6ZUA9 1318 aa11.81□□□□□ -0.52
PKP4-201ENST00000389757 GIGYF1O75420 1035 aaPredicted RBP11.81□□□□□ -0.52
PKP4-201ENST00000389757 CERS3Q8IU89 383 aa11.81□□□□□ -0.52
PKP4-201ENST00000389757 MYOM2P54296 1465 aa11.81□□□□□ -0.52
PKP4-201ENST00000389757 SPDYE3A6NKU9 549 aa11.81□□□□□ -0.52
PKP4-201ENST00000389757 TAF5LO75529 589 aa11.81□□□□□ -0.52
PKP4-201ENST00000389757 NEBLO76041 1014 aa11.81□□□□□ -0.52
PKP4-201ENST00000389757 CALML3P27482 149 aa11.81□□□□□ -0.52
PKP4-201ENST00000389757 SYCP3Q8IZU3 236 aa11.81□□□□□ -0.52
PKP4-201ENST00000389757 IL17REQ8NFR9 667 aa11.81□□□□□ -0.52
PKP4-201ENST00000389757 CCDC102BQ68D86 513 aa11.81□□□□□ -0.52
PKP4-201ENST00000389757 PLEKHM2Q8IWE5 1019 aa11.81□□□□□ -0.52
PKP4-201ENST00000389757 FAM177A1Q8N128 213 aaPredicted RBP11.81□□□□□ -0.52
PKP4-201ENST00000389757 ERCC6L2Q5T890 1561 aa11.8□□□□□ -0.52
PKP4-201ENST00000389757 CREB3L3Q68CJ9 461 aa11.8□□□□□ -0.52
PKP4-201ENST00000389757 FAM196AQ6ZSG2 479 aa11.8□□□□□ -0.52
PKP4-201ENST00000389757 NIM1KQ8IY84 436 aa11.8□□□□□ -0.52
PKP4-201ENST00000389757 KDM5AP29375 1690 aaKnown RBP11.8□□□□□ -0.52
PKP4-201ENST00000389757 TNNT3P45378 269 aaPredicted RBP11.8□□□□□ -0.52
PKP4-201ENST00000389757 TAF4BQ92750 862 aa11.8□□□□□ -0.52
PKP4-201ENST00000389757 TNPO1Q92973 898 aaKnown RBP11.8□□□□□ -0.52
PKP4-201ENST00000389757 SAP30BPQ9UHR5 308 aaKnown RBP11.8□□□□□ -0.52
PKP4-201ENST00000389757 ERBB4Q15303 1308 aa11.8□□□□□ -0.52
PKP4-201ENST00000389757 CETN2P41208 172 aa11.8□□□□□ -0.52
PKP4-201ENST00000389757 CCDC40Q4G0X9 1142 aa11.8□□□□□ -0.52
PKP4-201ENST00000389757 ARHGAP29Q52LW3 1261 aa11.8□□□□□ -0.52
PKP4-201ENST00000389757 DNAJC5Q9H3Z4 198 aa11.8□□□□□ -0.52
PKP4-201ENST00000389757 LOC102724428A0A0B4J2F2 783 aa11.79□□□□□ -0.52
PKP4-201ENST00000389757 SIK1P57059 783 aa11.79□□□□□ -0.52
PKP4-201ENST00000389757 RPS8P62241 208 aaKnown RBP11.79□□□□□ -0.52
PKP4-201ENST00000389757 SPA17Q15506 151 aa11.79□□□□□ -0.52
PKP4-201ENST00000389757 MSL1Q68DK7 614 aa11.79□□□□□ -0.52
PKP4-201ENST00000389757 PICK1Q9NRD5 415 aa11.79□□□□□ -0.52
PKP4-201ENST00000389757 FBXO3Q9UK99 471 aa11.79□□□□□ -0.52
PKP4-201ENST00000389757 AATKQ6ZMQ8 1374 aa11.79□□□□□ -0.52
PKP4-201ENST00000389757 DHX32Q7L7V1 743 aaKnown RBP11.79□□□□□ -0.52
PKP4-201ENST00000389757 GDPD2Q9HCC8 539 aa11.79□□□□□ -0.52
PKP4-201ENST00000389757 ATP7BP35670 1465 aa11.79□□□□□ -0.52
PKP4-201ENST00000389757 CHMLP26374 656 aa11.79□□□□□ -0.52
PKP4-201ENST00000389757 MTIF2P46199 727 aaKnown RBP11.79□□□□□ -0.52
PKP4-201ENST00000389757 TCERG1LQ5VWI1 586 aa11.79□□□□□ -0.52
PKP4-201ENST00000389757 VTI1AQ96AJ9 217 aa11.79□□□□□ -0.52
PKP4-201ENST00000389757 HOOK2Q96ED9 719 aa11.79□□□□□ -0.52
PKP4-201ENST00000389757 SPATA31E1Q6ZUB1 1445 aa11.79□□□□□ -0.52
PKP4-201ENST00000389757 WDR17Q8IZU2 1322 aa11.79□□□□□ -0.52
PKP4-201ENST00000389757 RTL1A6NKG5 1358 aa11.79□□□□□ -0.52
PKP4-201ENST00000389757 KDM6BO15054 1643 aa11.79□□□□□ -0.52
PKP4-201ENST00000389757 ZSCAN22P10073 491 aaPredicted RBP11.79□□□□□ -0.52
PKP4-201ENST00000389757 SFPQP23246 707 aaKnown RBP eCLIP11.79□□□□□ -0.526e-7■□□□□ 10.9
PKP4-201ENST00000389757 RAB3GAP1Q15042 981 aa11.79□□□□□ -0.52
PKP4-201ENST00000389757 USP6P35125 1406 aa11.78□□□□□ -0.52
PKP4-201ENST00000389757 NEURL1BA8MQ27 555 aa11.78□□□□□ -0.52
PKP4-201ENST00000389757 KCNQ3O43525 872 aa11.78□□□□□ -0.52
PKP4-201ENST00000389757 CHST3Q7LGC8 479 aa11.78□□□□□ -0.52
PKP4-201ENST00000389757 TBC1D22AQ8WUA7 517 aa11.78□□□□□ -0.52
PKP4-201ENST00000389757 BICD1Q96G01 975 aa11.78□□□□□ -0.52
PKP4-201ENST00000389757 GNA11P29992 359 aa11.78□□□□□ -0.52
PKP4-201ENST00000389757 JAKMIP3Q5VZ66 844 aa11.78□□□□□ -0.52
PKP4-201ENST00000389757 NLGN1Q8N2Q7 840 aa11.78□□□□□ -0.52
PKP4-201ENST00000389757 APPBP2Q92624 585 aa11.78□□□□□ -0.52
PKP4-201ENST00000389757 BIN1O00499 593 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 414.5 ms