RNA–Protein interactions for RNA: ENST00000389195.6

LTN1-203, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 1 (best) BASIC

Gene LTN1, Length 2,714 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-203ENST00000389195 ZPR1O75312 459 aa12.16□□□□□ -0.46
LTN1-203ENST00000389195 PRPF40AO75400 957 aaKnown RBP12.16□□□□□ -0.46
LTN1-203ENST00000389195 CHRNDQ07001 517 aa12.16□□□□□ -0.46
LTN1-203ENST00000389195 FAM173BQ6P4H8 233 aa12.16□□□□□ -0.46
LTN1-203ENST00000389195 RNF113AO15541 343 aaKnown RBP12.16□□□□□ -0.46
LTN1-203ENST00000389195 NBPF5PQ86XG9 351 aaPredicted RBP12.16□□□□□ -0.46
LTN1-203ENST00000389195 ZSWIM6Q9HCJ5 1215 aa12.16□□□□□ -0.46
LTN1-203ENST00000389195 RASGRF1Q13972 1273 aa12.15□□□□□ -0.46
LTN1-203ENST00000389195 TFCP2L1Q9NZI6 479 aa12.15□□□□□ -0.46
LTN1-203ENST00000389195 AKAP2Q9Y2D5 859 aa12.15□□□□□ -0.46
LTN1-203ENST00000389195 RTCBQ9Y3I0 505 aaKnown RBP12.15□□□□□ -0.46
LTN1-203ENST00000389195 SPATA31A6Q5VVP1 1343 aa12.15□□□□□ -0.46
LTN1-203ENST00000389195 APPP05067 770 aa12.15□□□□□ -0.47
LTN1-203ENST00000389195 FERMT3Q86UX7 667 aa12.15□□□□□ -0.47
LTN1-203ENST00000389195 MIGA1Q8NAN2 632 aa12.15□□□□□ -0.47
LTN1-203ENST00000389195 SETDB2Q96T68 719 aa12.15□□□□□ -0.47
LTN1-203ENST00000389195 HMG20BQ9P0W2 317 aa12.15□□□□□ -0.47
LTN1-203ENST00000389195 RBM27Q9P2N5 1060 aaKnown RBP12.15□□□□□ -0.47
LTN1-203ENST00000389195 BRPF3Q9ULD4 1205 aa12.15□□□□□ -0.47
LTN1-203ENST00000389195 LIMCH1Q9UPQ0 1083 aa12.15□□□□□ -0.47
LTN1-203ENST00000389195 TOB2Q14106 344 aaPredicted RBP12.14□□□□□ -0.47
LTN1-203ENST00000389195 SLC4A8Q2Y0W8 1093 aa12.14□□□□□ -0.47
LTN1-203ENST00000389195 ZMYM1Q5SVZ6 1142 aa12.14□□□□□ -0.47
LTN1-203ENST00000389195 BLOC1S2Q6QNY1 142 aa12.14□□□□□ -0.47
LTN1-203ENST00000389195 ABCF2Q9UG63 623 aa12.14□□□□□ -0.47
LTN1-203ENST00000389195 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.14□□□□□ -0.47
LTN1-203ENST00000389195 HIP1O00291 1037 aa12.14□□□□□ -0.47
LTN1-203ENST00000389195 RFC4P35249 363 aa12.14□□□□□ -0.47
LTN1-203ENST00000389195 CCDC152Q4G0S7 254 aa12.14□□□□□ -0.47
LTN1-203ENST00000389195 DDX11Q96FC9 970 aa12.14□□□□□ -0.47
LTN1-203ENST00000389195 NWD2Q9ULI1 1742 aa12.14□□□□□ -0.47
LTN1-203ENST00000389195 IGHMBP2P38935 993 aaKnown RBP12.13□□□□□ -0.47
LTN1-203ENST00000389195 CCT2P78371 535 aaKnown RBP12.13□□□□□ -0.47
LTN1-203ENST00000389195 Q6ZUG5 572 aa12.13□□□□□ -0.47
LTN1-203ENST00000389195 TXNRD3Q86VQ6 643 aa12.13□□□□□ -0.47
LTN1-203ENST00000389195 NCOA5Q9HCD5 579 aaKnown RBP12.13□□□□□ -0.47
LTN1-203ENST00000389195 GPR108Q9NPR9 543 aa12.13□□□□□ -0.47
LTN1-203ENST00000389195 TRPC5Q9UL62 973 aaPredicted RBP12.13□□□□□ -0.47
LTN1-203ENST00000389195 PRKAB2O43741 272 aa12.13□□□□□ -0.47
LTN1-203ENST00000389195 JAK2O60674 1132 aa12.13□□□□□ -0.47
LTN1-203ENST00000389195 FGAP02671 866 aa12.13□□□□□ -0.47
LTN1-203ENST00000389195 GJB2P29033 226 aa12.13□□□□□ -0.47
LTN1-203ENST00000389195 FGD1P98174 961 aa12.13□□□□□ -0.47
LTN1-203ENST00000389195 CUL4AQ13619 759 aa12.13□□□□□ -0.47
LTN1-203ENST00000389195 BRF1Q92994 677 aa12.13□□□□□ -0.47
LTN1-203ENST00000389195 ZNF532Q9HCE3 1301 aa12.12□□□□□ -0.47
LTN1-203ENST00000389195 SPEF2Q9C093 1822 aa12.12□□□□□ -0.47
LTN1-203ENST00000389195 RPS6KA4O75676 772 aa12.12□□□□□ -0.47
LTN1-203ENST00000389195 PUM3Q15397 648 aaKnown RBP12.12□□□□□ -0.47
LTN1-203ENST00000389195 PROM2Q8N271 834 aa12.12□□□□□ -0.47
LTN1-203ENST00000389195 MAGEB6Q8N7X4 407 aa12.12□□□□□ -0.47
LTN1-203ENST00000389195 NEK1Q96PY6 1258 aa12.12□□□□□ -0.47
LTN1-203ENST00000389195 BTAF1O14981 1849 aa12.12□□□□□ -0.47
LTN1-203ENST00000389195 GPAA1O43292 621 aa12.12□□□□□ -0.47
LTN1-203ENST00000389195 HSP90B1P14625 803 aaKnown RBP12.12□□□□□ -0.47
LTN1-203ENST00000389195 APOBRQ0VD83 1088 aa12.12□□□□□ -0.47
LTN1-203ENST00000389195 AK7Q96M32 723 aa12.12□□□□□ -0.47
LTN1-203ENST00000389195 NARFQ9UHQ1 456 aa12.12□□□□□ -0.47
LTN1-203ENST00000389195 ZNF652Q9Y2D9 606 aa12.12□□□□□ -0.47
LTN1-203ENST00000389195 VPS37CA5D8V6 355 aaPredicted RBP12.11□□□□□ -0.47
LTN1-203ENST00000389195 SYT1P21579 422 aa12.11□□□□□ -0.47
LTN1-203ENST00000389195 RPS6KB1P23443 525 aa12.11□□□□□ -0.47
LTN1-203ENST00000389195 EVX2Q03828 476 aa12.11□□□□□ -0.47
LTN1-203ENST00000389195 NFIXQ14938 502 aa12.11□□□□□ -0.47
LTN1-203ENST00000389195 PARP10Q53GL7 1025 aa12.11□□□□□ -0.47
LTN1-203ENST00000389195 TRAPPC3LQ5T215 181 aa12.11□□□□□ -0.47
LTN1-203ENST00000389195 SPATA5Q8NB90 893 aa12.11□□□□□ -0.47
LTN1-203ENST00000389195 GBP4Q96PP9 640 aa12.11□□□□□ -0.47
LTN1-203ENST00000389195 CIZ1Q9ULV3 898 aaPredicted RBP12.11□□□□□ -0.47
LTN1-203ENST00000389195 DDX49Q9Y6V7 483 aaKnown RBP12.11□□□□□ -0.47
LTN1-203ENST00000389195 MYH3P11055 1940 aa12.11□□□□□ -0.47
LTN1-203ENST00000389195 GADD45BO75293 160 aaPredicted RBP12.11□□□□□ -0.47
LTN1-203ENST00000389195 RXRAP19793 462 aa12.11□□□□□ -0.47
LTN1-203ENST00000389195 FGFR2P21802 821 aa12.11□□□□□ -0.47
LTN1-203ENST00000389195 ADGRA1Q86SQ6 560 aa12.11□□□□□ -0.47
LTN1-203ENST00000389195 GAS2L3Q86XJ1 694 aa12.11□□□□□ -0.47
LTN1-203ENST00000389195 LPIN2Q92539 896 aa12.11□□□□□ -0.47
LTN1-203ENST00000389195 CHMP4CQ96CF2 233 aa12.11□□□□□ -0.47
LTN1-203ENST00000389195 PANK2Q9BZ23 570 aa12.11□□□□□ -0.47
LTN1-203ENST00000389195 ARMT1Q9H993 441 aa12.11□□□□□ -0.47
LTN1-203ENST00000389195 RTN4Q9NQC3 1192 aaKnown RBP12.11□□□□□ -0.47
LTN1-203ENST00000389195 TCHHQ07283 1943 aa12.1□□□□□ -0.47
LTN1-203ENST00000389195 E7EWF7 191 aa12.1□□□□□ -0.47
LTN1-203ENST00000389195 EIF5BO60841 1220 aaKnown RBP12.1□□□□□ -0.47
LTN1-203ENST00000389195 OLFM4Q6UX06 510 aa12.1□□□□□ -0.47
LTN1-203ENST00000389195 MINPP1Q9UNW1 487 aa12.1□□□□□ -0.47
LTN1-203ENST00000389195 SMC3Q9UQE7 1217 aa12.1□□□□□ -0.47
LTN1-203ENST00000389195 RNF20Q5VTR2 975 aa12.1□□□□□ -0.47
LTN1-203ENST00000389195 CAVIN1Q6NZI2 390 aaKnown RBP12.1□□□□□ -0.47
LTN1-203ENST00000389195 KRT27Q7Z3Y8 459 aa12.1□□□□□ -0.47
LTN1-203ENST00000389195 ANKRD18AQ8IVF6 992 aa12.1□□□□□ -0.47
LTN1-203ENST00000389195 RPAP1Q9BWH6 1393 aaPredicted RBP12.1□□□□□ -0.47
LTN1-203ENST00000389195 ANKRD36CQ5JPF3 1778 aa12.1□□□□□ -0.47
LTN1-203ENST00000389195 PDE6AP16499 860 aa12.1□□□□□ -0.47
LTN1-203ENST00000389195 NUCB2P80303 420 aa12.1□□□□□ -0.47
LTN1-203ENST00000389195 KCNB2Q92953 911 aa12.1□□□□□ -0.47
LTN1-203ENST00000389195 SENP2Q9HC62 589 aa12.1□□□□□ -0.47
LTN1-203ENST00000389195 CNPY2Q9Y2B0 182 aa12.1□□□□□ -0.47
LTN1-203ENST00000389195 SLC5A1P13866 664 aa12.09□□□□□ -0.47
LTN1-203ENST00000389195 CHAF1AQ13111 956 aaPredicted RBP12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms