RNA–Protein interactions for RNA: ENST00000382100.7

VLDLR-203, Transcript of very low density lipoprotein receptor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VLDLR, Length 9,163 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VLDLR-203ENST00000382100 ABCD1P33897 745 aa11.14□□□□□ -0.63
VLDLR-203ENST00000382100 INPP5BP32019 993 aa11.14□□□□□ -0.63
VLDLR-203ENST00000382100 RAB11FIP4Q86YS3 637 aa11.14□□□□□ -0.63
VLDLR-203ENST00000382100 RMDN2Q96LZ7 410 aa11.14□□□□□ -0.63
VLDLR-203ENST00000382100 CHD1LQ86WJ1 897 aa11.14□□□□□ -0.63
VLDLR-203ENST00000382100 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.14□□□□□ -0.63
VLDLR-203ENST00000382100 FRMD3A2A2Y4 597 aa11.14□□□□□ -0.63
VLDLR-203ENST00000382100 NOP14P78316 857 aaKnown RBP11.14□□□□□ -0.63
VLDLR-203ENST00000382100 CCDC152Q4G0S7 254 aa11.14□□□□□ -0.63
VLDLR-203ENST00000382100 NUTM2DQ5VT03 806 aaPredicted RBP11.14□□□□□ -0.63
VLDLR-203ENST00000382100 HEATR3Q7Z4Q2 680 aa11.14□□□□□ -0.63
VLDLR-203ENST00000382100 CATIPQ7Z7H3 387 aa11.14□□□□□ -0.63
VLDLR-203ENST00000382100 RPAINQ86UA6 219 aa11.14□□□□□ -0.63
VLDLR-203ENST00000382100 NUTM2AQ8IVF1 878 aaPredicted RBP11.14□□□□□ -0.63
VLDLR-203ENST00000382100 EFHD1Q9BUP0 239 aa11.14□□□□□ -0.63
VLDLR-203ENST00000382100 CEP290O15078 2479 aa11.14□□□□□ -0.63
VLDLR-203ENST00000382100 ZKSCAN8Q15776 578 aaPredicted RBP11.14□□□□□ -0.63
VLDLR-203ENST00000382100 UBA7P41226 1012 aa11.13□□□□□ -0.63
VLDLR-203ENST00000382100 TACC3Q9Y6A5 838 aa11.13□□□□□ -0.63
VLDLR-203ENST00000382100 UBE4BO95155 1302 aa11.13□□□□□ -0.63
VLDLR-203ENST00000382100 DBN1Q16643 649 aa11.13□□□□□ -0.63
VLDLR-203ENST00000382100 TBCAO75347 108 aaKnown RBP11.13□□□□□ -0.63
VLDLR-203ENST00000382100 PSMA4P25789 261 aaKnown RBP11.13□□□□□ -0.63
VLDLR-203ENST00000382100 NAA25Q14CX7 972 aa11.13□□□□□ -0.63
VLDLR-203ENST00000382100 CEP57Q86XR8 500 aa11.13□□□□□ -0.63
VLDLR-203ENST00000382100 SLC8A3P57103 927 aa11.13□□□□□ -0.63
VLDLR-203ENST00000382100 TMED8Q6PL24 325 aaPredicted RBP11.13□□□□□ -0.63
VLDLR-203ENST00000382100 CCDC25Q86WR0 208 aa11.13□□□□□ -0.63
VLDLR-203ENST00000382100 SSFA2P28290 1259 aa11.13□□□□□ -0.63
VLDLR-203ENST00000382100 BRD3Q15059 726 aa11.13□□□□□ -0.63
VLDLR-203ENST00000382100 MCF2L2Q86YR7 1114 aa11.13□□□□□ -0.63
VLDLR-203ENST00000382100 HELBQ8NG08 1087 aaPredicted RBP11.13□□□□□ -0.63
VLDLR-203ENST00000382100 CCDC51Q96ER9 411 aa11.13□□□□□ -0.63
VLDLR-203ENST00000382100 NUP58Q9BVL2 599 aa11.13□□□□□ -0.63
VLDLR-203ENST00000382100 SYNCQ9H7C4 482 aa11.13□□□□□ -0.63
VLDLR-203ENST00000382100 LCMT1Q9UIC8 334 aa11.13□□□□□ -0.63
VLDLR-203ENST00000382100 NCBP1Q09161 790 aaKnown RBP11.13□□□□□ -0.63
VLDLR-203ENST00000382100 KIFAP3Q92845 792 aa11.13□□□□□ -0.63
VLDLR-203ENST00000382100 NINQ8N4C6 2090 aa11.12□□□□□ -0.63
VLDLR-203ENST00000382100 PSDA5PKW4 1024 aaPredicted RBP11.12□□□□□ -0.63
VLDLR-203ENST00000382100 FOXD4L5Q5VV16 416 aaPredicted RBP11.12□□□□□ -0.63
VLDLR-203ENST00000382100 FOXD4L4Q8WXT5 416 aaPredicted RBP11.12□□□□□ -0.63
VLDLR-203ENST00000382100 GNG11P61952 73 aa11.12□□□□□ -0.63
VLDLR-203ENST00000382100 DRC1Q96MC2 740 aa11.12□□□□□ -0.63
VLDLR-203ENST00000382100 FOXD4L1Q9NU39 408 aa11.12□□□□□ -0.63
VLDLR-203ENST00000382100 A0A1B0GVL5 298 aa11.12□□□□□ -0.63
VLDLR-203ENST00000382100 SP100P23497 879 aaPredicted RBP11.12□□□□□ -0.63
VLDLR-203ENST00000382100 ZNF76P36508 570 aa11.12□□□□□ -0.63
VLDLR-203ENST00000382100 PDE4BQ07343 736 aa11.12□□□□□ -0.63
VLDLR-203ENST00000382100 TDRD12Q587J7 1177 aaKnown RBP11.12□□□□□ -0.63
VLDLR-203ENST00000382100 EXOC6Q8TAG9 804 aa11.12□□□□□ -0.63
VLDLR-203ENST00000382100 ATRIPQ8WXE1 791 aa11.12□□□□□ -0.63
VLDLR-203ENST00000382100 PRPF6O94906 941 aaKnown RBP11.12□□□□□ -0.63
VLDLR-203ENST00000382100 RAB17Q9H0T7 212 aa11.12□□□□□ -0.63
VLDLR-203ENST00000382100 GOPCQ9HD26 462 aa11.12□□□□□ -0.63
VLDLR-203ENST00000382100 CNNM3Q8NE01 707 aa11.12□□□□□ -0.63
VLDLR-203ENST00000382100 F8W8V4 182 aa11.12□□□□□ -0.63
VLDLR-203ENST00000382100 MCTP2Q6DN12 878 aa11.12□□□□□ -0.63
VLDLR-203ENST00000382100 GPATCH11Q8N954 259 aa11.12□□□□□ -0.63
VLDLR-203ENST00000382100 ARHGAP45Q92619 1136 aa11.12□□□□□ -0.63
VLDLR-203ENST00000382100 VTI1AQ96AJ9 217 aa11.12□□□□□ -0.63
VLDLR-203ENST00000382100 ATP6V1E1P36543 226 aa11.11□□□□□ -0.63
VLDLR-203ENST00000382100 MAP3K12Q12852 859 aa11.11□□□□□ -0.63
VLDLR-203ENST00000382100 CCDC117Q8IWD4 279 aaPredicted RBP11.11□□□□□ -0.63
VLDLR-203ENST00000382100 NEUROD6Q96NK8 337 aa11.11□□□□□ -0.63
VLDLR-203ENST00000382100 SYNJ2O15056 1496 aa11.11□□□□□ -0.63
VLDLR-203ENST00000382100 VPS52Q8N1B4 723 aa11.11□□□□□ -0.63
VLDLR-203ENST00000382100 LDHCP07864 332 aa11.11□□□□□ -0.63
VLDLR-203ENST00000382100 AIDAQ96BJ3 306 aa11.11□□□□□ -0.63
VLDLR-203ENST00000382100 NOX5Q96PH1 765 aa11.11□□□□□ -0.63
VLDLR-203ENST00000382100 PHBP35232 272 aa11.11□□□□□ -0.63
VLDLR-203ENST00000382100 AFAP1L1Q8TED9 768 aa11.11□□□□□ -0.63
VLDLR-203ENST00000382100 FAM96AQ9H5X1 160 aa11.11□□□□□ -0.63
VLDLR-203ENST00000382100 CACNA1FO60840 1977 aa11.11□□□□□ -0.63
VLDLR-203ENST00000382100 MAML3Q96JK9 1138 aa11.11□□□□□ -0.63
VLDLR-203ENST00000382100 CROCCQ5TZA2 2017 aa11.11□□□□□ -0.63
VLDLR-203ENST00000382100 KRT13P13646 458 aa11.11□□□□□ -0.63
VLDLR-203ENST00000382100 SNX21Q969T3 373 aa11.11□□□□□ -0.63
VLDLR-203ENST00000382100 HAUS1Q96CS2 278 aa11.11□□□□□ -0.63
VLDLR-203ENST00000382100 MYO1AQ9UBC5 1043 aa11.11□□□□□ -0.63
VLDLR-203ENST00000382100 POGZQ7Z3K3 1410 aa11.11□□□□□ -0.63
VLDLR-203ENST00000382100 MAN1A2O60476 641 aa11.11□□□□□ -0.63
VLDLR-203ENST00000382100 MTIF2P46199 727 aaKnown RBP11.1□□□□□ -0.63
VLDLR-203ENST00000382100 PAK2Q13177 524 aa11.1□□□□□ -0.63
VLDLR-203ENST00000382100 NBPF10Q6P3W6 841 aaKnown RBP11.1□□□□□ -0.63
VLDLR-203ENST00000382100 FAM81BQ96LP2 452 aa11.1□□□□□ -0.63
VLDLR-203ENST00000382100 MRPL40Q9NQ50 206 aaKnown RBP11.1□□□□□ -0.63
VLDLR-203ENST00000382100 ARHGAP31Q2M1Z3 1444 aa11.1□□□□□ -0.63
VLDLR-203ENST00000382100 SYCE3A1L190 88 aa11.1□□□□□ -0.63
VLDLR-203ENST00000382100 RNF40O75150 1001 aa11.1□□□□□ -0.63
VLDLR-203ENST00000382100 BBOF1Q8ND07 529 aa11.1□□□□□ -0.63
VLDLR-203ENST00000382100 EDEM3Q9BZQ6 932 aa11.1□□□□□ -0.63
VLDLR-203ENST00000382100 ORC3Q9UBD5 711 aaPredicted RBP11.1□□□□□ -0.63
VLDLR-203ENST00000382100 TTC39AQ5SRH9 613 aa11.1□□□□□ -0.63
VLDLR-203ENST00000382100 EXOC1Q9NV70 894 aa11.1□□□□□ -0.63
VLDLR-203ENST00000382100 LRPPRCP42704 1394 aaKnown RBP11.1□□□□□ -0.63
VLDLR-203ENST00000382100 NDUFAB1O14561 156 aa11.1□□□□□ -0.63
VLDLR-203ENST00000382100 GKAP1Q5VSY0 366 aaPredicted RBP11.1□□□□□ -0.63
VLDLR-203ENST00000382100 TEX13AQ9BXU3 409 aaPredicted RBP11.1□□□□□ -0.63
VLDLR-203ENST00000382100 FGFR1OP2Q9NVK5 253 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms