RNA–Protein interactions for RNA: ENST00000381870.7

CTNS-202, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 1 (best) BASIC

Gene CTNS, Length 2,470 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-202ENST00000381870 LOC102724159A0A0B4J2E5 919 aa17.37■□□□□ 0.37
CTNS-202ENST00000381870 NDUFA8P51970 172 aa17.37■□□□□ 0.37
CTNS-202ENST00000381870 FANCCQ00597 558 aa17.37■□□□□ 0.37
CTNS-202ENST00000381870 GUCY1B3Q02153 619 aa17.37■□□□□ 0.37
CTNS-202ENST00000381870 PSME1Q06323 249 aa17.37■□□□□ 0.37
CTNS-202ENST00000381870 PWP2Q15269 919 aaKnown RBP17.37■□□□□ 0.37
CTNS-202ENST00000381870 ZRSR1Q15695 479 aaKnown RBP17.37■□□□□ 0.37
CTNS-202ENST00000381870 FSD1Q9BTV5 496 aa17.37■□□□□ 0.37
CTNS-202ENST00000381870 PCDHA7Q9UN72 937 aa17.37■□□□□ 0.37
CTNS-202ENST00000381870 MAP3K9P80192 1104 aa17.36■□□□□ 0.37
CTNS-202ENST00000381870 BEND3Q5T5X7 828 aa17.36■□□□□ 0.37
CTNS-202ENST00000381870 MRPS27Q92552 414 aaKnown RBP17.36■□□□□ 0.37
CTNS-202ENST00000381870 DPF2Q92785 391 aa17.36■□□□□ 0.37
CTNS-202ENST00000381870 BPIFA3Q9BQP9 254 aa17.36■□□□□ 0.37
CTNS-202ENST00000381870 VPS18Q9P253 973 aa17.36■□□□□ 0.37
CTNS-202ENST00000381870 NUTM2FA1L443 756 aa17.36■□□□□ 0.37
CTNS-202ENST00000381870 HIP1O00291 1037 aa17.36■□□□□ 0.37
CTNS-202ENST00000381870 NUTM2GQ5VZR2 741 aa17.36■□□□□ 0.37
CTNS-202ENST00000381870 ISM2Q6H9L7 571 aa17.36■□□□□ 0.37
CTNS-202ENST00000381870 SMARCC2Q8TAQ2 1214 aa17.36■□□□□ 0.37
CTNS-202ENST00000381870 SEC62Q99442 399 aaKnown RBP17.36■□□□□ 0.37
CTNS-202ENST00000381870 CCDC8Q9H0W5 538 aaPredicted RBP17.36■□□□□ 0.37
CTNS-202ENST00000381870 BOLA2Q9H3K6 86 aa17.36■□□□□ 0.37
CTNS-202ENST00000381870 TOMM22Q9NS69 142 aa17.36■□□□□ 0.37
CTNS-202ENST00000381870 A0A1B0GUL7 405 aa17.35■□□□□ 0.37
CTNS-202ENST00000381870 EIF2S2P20042 333 aaKnown RBP17.35■□□□□ 0.37
CTNS-202ENST00000381870 LEKR1Q6ZMV7 388 aa17.35■□□□□ 0.37
CTNS-202ENST00000381870 ILDR1Q86SU0 546 aaPredicted RBP17.35■□□□□ 0.37
CTNS-202ENST00000381870 TXNDC2Q86VQ3 553 aa17.35■□□□□ 0.37
CTNS-202ENST00000381870 GOLGA6L1Q8N7Z2 621 aa17.35■□□□□ 0.37
CTNS-202ENST00000381870 TLR7Q9NYK1 1049 aaKnown RBP17.35■□□□□ 0.37
CTNS-202ENST00000381870 MRFAP1Q9Y605 127 aa17.35■□□□□ 0.37
CTNS-202ENST00000381870 MED23Q9ULK4 1368 aa17.35■□□□□ 0.37
CTNS-202ENST00000381870 PI4KAP2A4QPH2 592 aa17.35■□□□□ 0.37
CTNS-202ENST00000381870 GNG11P61952 73 aa17.35■□□□□ 0.37
CTNS-202ENST00000381870 TSGA10IPQ3SY00 556 aa17.35■□□□□ 0.37
CTNS-202ENST00000381870 NAA16Q6N069 864 aaPredicted RBP17.35■□□□□ 0.37
CTNS-202ENST00000381870 PI4KAP1Q8N8J0 262 aa17.35■□□□□ 0.37
CTNS-202ENST00000381870 NSUN7Q8NE18 718 aaKnown RBP17.35■□□□□ 0.37
CTNS-202ENST00000381870 NEK1Q96PY6 1258 aa17.35■□□□□ 0.37
CTNS-202ENST00000381870 HMG20BQ9P0W2 317 aa17.35■□□□□ 0.37
CTNS-202ENST00000381870 JRKLQ9Y4A0 524 aa17.35■□□□□ 0.37
CTNS-202ENST00000381870 NEDD4P46934 1319 aa17.35■□□□□ 0.37
CTNS-202ENST00000381870 CTDNEP1O95476 244 aa17.34■□□□□ 0.37
CTNS-202ENST00000381870 TTC31Q49AM3 519 aaPredicted RBP17.34■□□□□ 0.37
CTNS-202ENST00000381870 SIRT1Q96EB6 747 aa17.34■□□□□ 0.37
CTNS-202ENST00000381870 ZNF396Q96N95 335 aaPredicted RBP17.34■□□□□ 0.37
CTNS-202ENST00000381870 HSD3B7Q9H2F3 369 aa17.34■□□□□ 0.37
CTNS-202ENST00000381870 PDE11AQ9HCR9 933 aa17.34■□□□□ 0.37
CTNS-202ENST00000381870 PPP2R2CQ9Y2T4 447 aa17.34■□□□□ 0.37
CTNS-202ENST00000381870 AGLP35573 1532 aa17.34■□□□□ 0.37
CTNS-202ENST00000381870 MAP2K7O14733 419 aa17.33■□□□□ 0.37
CTNS-202ENST00000381870 CHRM1P11229 460 aaPredicted RBP17.33■□□□□ 0.37
CTNS-202ENST00000381870 NBPF6Q5VWK0 638 aa17.33■□□□□ 0.37
CTNS-202ENST00000381870 RABGGTAQ92696 567 aa17.33■□□□□ 0.37
CTNS-202ENST00000381870 EAF2Q96CJ1 260 aaPredicted RBP17.33■□□□□ 0.37
CTNS-202ENST00000381870 NBPF4Q96M43 638 aa17.33■□□□□ 0.37
CTNS-202ENST00000381870 MPHOSPH8Q99549 860 aa17.33■□□□□ 0.37
CTNS-202ENST00000381870 PRR36Q9H6K5 1346 aa17.33■□□□□ 0.36
CTNS-202ENST00000381870 PTPDC1A2A3K4 754 aa17.33■□□□□ 0.36
CTNS-202ENST00000381870 ANKRD65E5RJM6 399 aa17.33■□□□□ 0.36
CTNS-202ENST00000381870 TAF5LO75529 589 aa17.33■□□□□ 0.36
CTNS-202ENST00000381870 DHX8Q14562 1220 aaKnown RBP17.33■□□□□ 0.36
CTNS-202ENST00000381870 MCM6Q14566 821 aa17.33■□□□□ 0.36
CTNS-202ENST00000381870 ERC1Q8IUD2 1116 aa17.33■□□□□ 0.36
CTNS-202ENST00000381870 IL17REQ8NFR9 667 aa17.33■□□□□ 0.36
CTNS-202ENST00000381870 DNAAF4Q8WXU2 420 aa17.33■□□□□ 0.36
CTNS-202ENST00000381870 ZSWIM4Q9H7M6 989 aa17.33■□□□□ 0.36
CTNS-202ENST00000381870 ZSCAN12O43309 604 aa17.32■□□□□ 0.36
CTNS-202ENST00000381870 N4BP1O75113 896 aaKnown RBP17.32■□□□□ 0.36
CTNS-202ENST00000381870 GUCY2CP25092 1073 aa17.32■□□□□ 0.36
CTNS-202ENST00000381870 MAGEA9P43362 315 aa17.32■□□□□ 0.36
CTNS-202ENST00000381870 NOM1Q5C9Z4 860 aaKnown RBP17.32■□□□□ 0.36
CTNS-202ENST00000381870 EDC3Q96F86 508 aaKnown RBP17.32■□□□□ 0.36
CTNS-202ENST00000381870 DRC1Q96MC2 740 aa17.32■□□□□ 0.36
CTNS-202ENST00000381870 SLC26A8Q96RN1 970 aa17.32■□□□□ 0.36
CTNS-202ENST00000381870 MYH15Q9Y2K3 1946 aa17.32■□□□□ 0.36
CTNS-202ENST00000381870 TMEM232C9JQI7 657 aa17.32■□□□□ 0.36
CTNS-202ENST00000381870 IVLP07476 585 aa17.32■□□□□ 0.36
CTNS-202ENST00000381870 NLRP12P59046 1061 aa17.32■□□□□ 0.36
CTNS-202ENST00000381870 GOLGA1Q92805 767 aa17.32■□□□□ 0.36
CTNS-202ENST00000381870 DHX58Q96C10 678 aa17.32■□□□□ 0.36
CTNS-202ENST00000381870 EYA1Q99502 592 aa17.32■□□□□ 0.36
CTNS-202ENST00000381870 COL15A1P39059 1388 aa17.32■□□□□ 0.36
CTNS-202ENST00000381870 GNAT3A8MTJ3 354 aa17.31■□□□□ 0.36
CTNS-202ENST00000381870 EIF3CLB5ME19 914 aaKnown RBP17.31■□□□□ 0.36
CTNS-202ENST00000381870 ANXA1P04083 346 aa17.31■□□□□ 0.36
CTNS-202ENST00000381870 TXLNAP40222 546 aa17.31■□□□□ 0.36
CTNS-202ENST00000381870 UBASH3AP57075 661 aa17.31■□□□□ 0.36
CTNS-202ENST00000381870 CCT2P78371 535 aaKnown RBP17.31■□□□□ 0.36
CTNS-202ENST00000381870 APOBRQ0VD83 1088 aa17.31■□□□□ 0.36
CTNS-202ENST00000381870 TMEM139Q8IV31 216 aa17.31■□□□□ 0.36
CTNS-202ENST00000381870 EIF3CQ99613 913 aaKnown RBP17.31■□□□□ 0.36
CTNS-202ENST00000381870 CACNA1FO60840 1977 aa17.31■□□□□ 0.36
CTNS-202ENST00000381870 SLC3A2P08195 630 aaKnown RBP17.31■□□□□ 0.36
CTNS-202ENST00000381870 ADALQ6DHV7 355 aa17.31■□□□□ 0.36
CTNS-202ENST00000381870 SECISBP2LQ93073 1101 aaKnown RBP17.31■□□□□ 0.36
CTNS-202ENST00000381870 KIFC2Q96AC6 838 aa17.31■□□□□ 0.36
CTNS-202ENST00000381870 CEP170BQ9Y4F5 1589 aaPredicted RBP17.31■□□□□ 0.36
CTNS-202ENST00000381870 CCDC151A5D8V7 595 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms