RNA–Protein interactions for RNA: ENST00000381535.4

SYNGR1-204, Transcript of synaptogyrin 1, humanhuman

TSL 1 (best) BASIC

Gene SYNGR1, Length 1,295 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR1-204ENST00000381535 RPGRQ92834 1020 aaKnown RBP17.55■□□□□ 0.4
SYNGR1-204ENST00000381535 RBM17Q96I25 401 aaKnown RBP17.55■□□□□ 0.4
SYNGR1-204ENST00000381535 ANKRD2Q9GZV1 360 aa17.55■□□□□ 0.4
SYNGR1-204ENST00000381535 IL25Q9H293 177 aa17.55■□□□□ 0.4
SYNGR1-204ENST00000381535 DAXXQ9UER7 740 aaPredicted RBP17.55■□□□□ 0.4
SYNGR1-204ENST00000381535 PARP3Q9Y6F1 533 aa17.55■□□□□ 0.4
SYNGR1-204ENST00000381535 MCCP23508 829 aa17.54■□□□□ 0.4
SYNGR1-204ENST00000381535 PHKA1P46020 1223 aa17.54■□□□□ 0.4
SYNGR1-204ENST00000381535 BECN1Q14457 450 aa17.54■□□□□ 0.4
SYNGR1-204ENST00000381535 FAM227BQ96M60 508 aa17.54■□□□□ 0.4
SYNGR1-204ENST00000381535 KIF2CQ99661 725 aa17.54■□□□□ 0.4
SYNGR1-204ENST00000381535 QSER1Q2KHR3 1735 aa17.53■□□□□ 0.4
SYNGR1-204ENST00000381535 MMP10P09238 476 aa17.53■□□□□ 0.4
SYNGR1-204ENST00000381535 ARID4AP29374 1257 aaPredicted RBP17.53■□□□□ 0.4
SYNGR1-204ENST00000381535 ZAP70P43403 619 aa17.53■□□□□ 0.4
SYNGR1-204ENST00000381535 SCARF1Q14162 830 aa17.53■□□□□ 0.4
SYNGR1-204ENST00000381535 CRY2Q49AN0 593 aa17.53■□□□□ 0.4
SYNGR1-204ENST00000381535 LSG1Q9H089 658 aaKnown RBP17.53■□□□□ 0.4
SYNGR1-204ENST00000381535 ANTXR1Q9H6X2 564 aa17.53■□□□□ 0.4
SYNGR1-204ENST00000381535 KLRG2A4D1S0 409 aaPredicted RBP17.52■□□□□ 0.4
SYNGR1-204ENST00000381535 LRRFIP1Q32MZ4 808 aaKnown RBP17.52■□□□□ 0.4
SYNGR1-204ENST00000381535 MSL1Q68DK7 614 aa17.52■□□□□ 0.4
SYNGR1-204ENST00000381535 BRIP1Q9BX63 1249 aa17.52■□□□□ 0.4
SYNGR1-204ENST00000381535 RFX7Q2KHR2 1363 aa17.52■□□□□ 0.39
SYNGR1-204ENST00000381535 COL4A1P02462 1669 aa17.52■□□□□ 0.39
SYNGR1-204ENST00000381535 A0A0D9SFI3 127 aa17.51■□□□□ 0.39
SYNGR1-204ENST00000381535 RNF113AO15541 343 aaKnown RBP17.51■□□□□ 0.39
SYNGR1-204ENST00000381535 TAF1P21675 1872 aa17.51■□□□□ 0.39
SYNGR1-204ENST00000381535 HOXA10P31260 410 aaPredicted RBP17.51■□□□□ 0.39
SYNGR1-204ENST00000381535 MCAMP43121 646 aa17.51■□□□□ 0.39
SYNGR1-204ENST00000381535 SLC4A3P48751 1232 aa17.51■□□□□ 0.39
SYNGR1-204ENST00000381535 BCAMP50895 628 aa17.51■□□□□ 0.39
SYNGR1-204ENST00000381535 NLGN2Q8NFZ4 835 aa17.51■□□□□ 0.39
SYNGR1-204ENST00000381535 CRAMP1Q96RY5 1269 aa17.51■□□□□ 0.39
SYNGR1-204ENST00000381535 RAD50Q92878 1312 aa17.5■□□□□ 0.39
SYNGR1-204ENST00000381535 BBOX1O75936 387 aa17.5■□□□□ 0.39
SYNGR1-204ENST00000381535 KCNJ4P48050 445 aa17.5■□□□□ 0.39
SYNGR1-204ENST00000381535 TTF1Q15361 905 aaPredicted RBP17.5■□□□□ 0.39
SYNGR1-204ENST00000381535 MCMDC2Q4G0Z9 681 aa17.5■□□□□ 0.39
SYNGR1-204ENST00000381535 HELLSQ9NRZ9 838 aa17.5■□□□□ 0.39
SYNGR1-204ENST00000381535 GNL3LQ9NVN8 582 aaKnown RBP17.5■□□□□ 0.39
SYNGR1-204ENST00000381535 CD2APQ9Y5K6 639 aa17.5■□□□□ 0.39
SYNGR1-204ENST00000381535 WTIPA6NIX2 430 aaPredicted RBP17.49■□□□□ 0.39
SYNGR1-204ENST00000381535 PDE6BP35913 854 aa17.49■□□□□ 0.39
SYNGR1-204ENST00000381535 PTH1RQ03431 593 aa17.49■□□□□ 0.39
SYNGR1-204ENST00000381535 RABEP1Q15276 862 aa17.49■□□□□ 0.39
SYNGR1-204ENST00000381535 GPR162Q16538 588 aa17.49■□□□□ 0.39
SYNGR1-204ENST00000381535 PI16Q6UXB8 463 aa17.49■□□□□ 0.39
SYNGR1-204ENST00000381535 SPATA5Q8NB90 893 aa17.49■□□□□ 0.39
SYNGR1-204ENST00000381535 HMG20BQ9P0W2 317 aa17.49■□□□□ 0.39
SYNGR1-204ENST00000381535 SPEF2Q9C093 1822 aa17.49■□□□□ 0.39
SYNGR1-204ENST00000381535 CYP2E1P05181 493 aaPredicted RBP17.48■□□□□ 0.39
SYNGR1-204ENST00000381535 ZFYP08048 801 aaPredicted RBP17.48■□□□□ 0.39
SYNGR1-204ENST00000381535 HSPA4P34932 840 aa17.48■□□□□ 0.39
SYNGR1-204ENST00000381535 ANAPC15P60006 121 aa17.48■□□□□ 0.39
SYNGR1-204ENST00000381535 CAVIN4Q5BKX8 364 aa17.48■□□□□ 0.39
SYNGR1-204ENST00000381535 ZMYM1Q5SVZ6 1142 aa17.48■□□□□ 0.39
SYNGR1-204ENST00000381535 KLHL34Q8N239 644 aa17.48■□□□□ 0.39
SYNGR1-204ENST00000381535 SNX21Q969T3 373 aa17.48■□□□□ 0.39
SYNGR1-204ENST00000381535 TBC1D2Q9BYX2 928 aa17.48■□□□□ 0.39
SYNGR1-204ENST00000381535 LEMD3Q9Y2U8 911 aa17.48■□□□□ 0.39
SYNGR1-204ENST00000381535 TNRC6CQ9HCJ0 1690 aaKnown RBP17.48■□□□□ 0.39
SYNGR1-204ENST00000381535 CHGBP05060 677 aa17.47■□□□□ 0.39
SYNGR1-204ENST00000381535 GYG1P46976 350 aa17.47■□□□□ 0.39
SYNGR1-204ENST00000381535 ZSCAN25Q6NSZ9 544 aa17.47■□□□□ 0.39
SYNGR1-204ENST00000381535 FBXO33Q7Z6M2 555 aa17.47■□□□□ 0.39
SYNGR1-204ENST00000381535 FAM84BQ96KN1 310 aaPredicted RBP17.47■□□□□ 0.39
SYNGR1-204ENST00000381535 ZNF804BA4D1E1 1349 aa17.47■□□□□ 0.39
SYNGR1-204ENST00000381535 NPR1P16066 1061 aa17.46■□□□□ 0.39
SYNGR1-204ENST00000381535 RASGRF1Q13972 1273 aa17.46■□□□□ 0.39
SYNGR1-204ENST00000381535 SLFNL1Q499Z3 407 aa17.46■□□□□ 0.39
SYNGR1-204ENST00000381535 ZNF589Q86UQ0 364 aaPredicted RBP17.46■□□□□ 0.39
SYNGR1-204ENST00000381535 VPS37DQ86XT2 251 aa17.46■□□□□ 0.39
SYNGR1-204ENST00000381535 MAP4K1Q92918 833 aa17.46■□□□□ 0.39
SYNGR1-204ENST00000381535 SEC62Q99442 399 aaKnown RBP17.46■□□□□ 0.39
SYNGR1-204ENST00000381535 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.46■□□□□ 0.39
SYNGR1-204ENST00000381535 PIH1D3Q9NQM4 214 aaKnown RBP17.46■□□□□ 0.39
SYNGR1-204ENST00000381535 ANKIB1Q9P2G1 1089 aa17.46■□□□□ 0.39
SYNGR1-204ENST00000381535 PALD1Q9ULE6 856 aa17.46■□□□□ 0.39
SYNGR1-204ENST00000381535 CCDC171Q6TFL3 1326 aa17.46■□□□□ 0.38
SYNGR1-204ENST00000381535 MED23Q9ULK4 1368 aa17.45■□□□□ 0.38
SYNGR1-204ENST00000381535 CCDC129Q6ZRS4 1044 aa17.45■□□□□ 0.38
SYNGR1-204ENST00000381535 TMC4Q7Z404 712 aa17.45■□□□□ 0.38
SYNGR1-204ENST00000381535 HSCBQ8IWL3 235 aa17.45■□□□□ 0.38
SYNGR1-204ENST00000381535 XDHP47989 1333 aa17.45■□□□□ 0.38
SYNGR1-204ENST00000381535 SRGNP10124 158 aa17.44■□□□□ 0.38
SYNGR1-204ENST00000381535 ALDH1B1P30837 517 aa17.44■□□□□ 0.38
SYNGR1-204ENST00000381535 HIBADHP31937 336 aaKnown RBP17.44■□□□□ 0.38
SYNGR1-204ENST00000381535 GPSM2P81274 684 aa17.44■□□□□ 0.38
SYNGR1-204ENST00000381535 WASHC4Q2M389 1173 aa17.44■□□□□ 0.38
SYNGR1-204ENST00000381535 SP8Q8IXZ3 490 aa17.44■□□□□ 0.38
SYNGR1-204ENST00000381535 ZNF784Q8NCA9 323 aaPredicted RBP17.44■□□□□ 0.38
SYNGR1-204ENST00000381535 IL17RAQ96F46 866 aa17.44■□□□□ 0.38
SYNGR1-204ENST00000381535 RBM8AQ9Y5S9 174 aaKnown RBP17.44■□□□□ 0.38
SYNGR1-204ENST00000381535 AKAP11Q9UKA4 1901 aa17.43■□□□□ 0.38
SYNGR1-204ENST00000381535 GRIN3BO60391 1043 aa17.43■□□□□ 0.38
SYNGR1-204ENST00000381535 IDH1O75874 414 aaKnown RBP17.43■□□□□ 0.38
SYNGR1-204ENST00000381535 ATP2B4P23634 1241 aa17.43■□□□□ 0.38
SYNGR1-204ENST00000381535 NECTIN1Q15223 517 aa17.43■□□□□ 0.38
SYNGR1-204ENST00000381535 PRPF40BQ6NWY9 871 aaKnown RBP17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms