RNA–Protein interactions for RNA: ENST00000381209.7

RPAIN-203, Transcript of RPA interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPAIN, Length 1,535 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-203ENST00000381209 SH2B1Q9NRF2 756 aaPredicted RBP20.64■□□□□ 0.9
RPAIN-203ENST00000381209 LAMB2P55268 1798 aa20.64■□□□□ 0.89
RPAIN-203ENST00000381209 CPA1P15085 419 aa20.63■□□□□ 0.89
RPAIN-203ENST00000381209 GSE1Q14687 1217 aa20.63■□□□□ 0.89
RPAIN-203ENST00000381209 FAM196AQ6ZSG2 479 aa20.63■□□□□ 0.89
RPAIN-203ENST00000381209 APPBP2Q92624 585 aa20.63■□□□□ 0.89
RPAIN-203ENST00000381209 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.63■□□□□ 0.89
RPAIN-203ENST00000381209 SRP68Q9UHB9 627 aaKnown RBP20.63■□□□□ 0.89
RPAIN-203ENST00000381209 DDX60Q8IY21 1712 aaKnown RBP20.63■□□□□ 0.89
RPAIN-203ENST00000381209 ADRA2BP18089 450 aa20.63■□□□□ 0.89
RPAIN-203ENST00000381209 RPS6KB1P23443 525 aa20.63■□□□□ 0.89
RPAIN-203ENST00000381209 GTF2E1P29083 439 aaPredicted RBP20.63■□□□□ 0.89
RPAIN-203ENST00000381209 HELBQ8NG08 1087 aaPredicted RBP20.63■□□□□ 0.89
RPAIN-203ENST00000381209 PHKA1P46020 1223 aa20.62■□□□□ 0.89
RPAIN-203ENST00000381209 TRAPPC3LQ5T215 181 aa20.62■□□□□ 0.89
RPAIN-203ENST00000381209 BICDL1Q6ZP65 573 aa20.62■□□□□ 0.89
RPAIN-203ENST00000381209 ANKRD18AQ8IVF6 992 aa20.62■□□□□ 0.89
RPAIN-203ENST00000381209 OSBP2Q969R2 916 aa20.62■□□□□ 0.89
RPAIN-203ENST00000381209 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.62■□□□□ 0.89
RPAIN-203ENST00000381209 BAG4O95429 457 aaKnown RBP20.61■□□□□ 0.89
RPAIN-203ENST00000381209 HSPD1P10809 573 aaKnown RBP20.61■□□□□ 0.89
RPAIN-203ENST00000381209 TPTE2Q6XPS3 522 aa20.61■□□□□ 0.89
RPAIN-203ENST00000381209 SMIM5Q71RC9 77 aa20.61■□□□□ 0.89
RPAIN-203ENST00000381209 LY75O60449 1722 aa20.6■□□□□ 0.89
RPAIN-203ENST00000381209 GOLGA6L22H0YM25 854 aa20.6■□□□□ 0.89
RPAIN-203ENST00000381209 M0R2C6 588 aa20.6■□□□□ 0.89
RPAIN-203ENST00000381209 CYP21A2P08686 494 aa20.6■□□□□ 0.89
RPAIN-203ENST00000381209 HMGB2P26583 209 aaKnown RBP20.6■□□□□ 0.89
RPAIN-203ENST00000381209 CHRNDQ07001 517 aa20.6■□□□□ 0.89
RPAIN-203ENST00000381209 SLFNL1Q499Z3 407 aa20.6■□□□□ 0.89
RPAIN-203ENST00000381209 SLC27A3Q5K4L6 730 aa20.6■□□□□ 0.89
RPAIN-203ENST00000381209 NBPF5PQ86XG9 351 aaPredicted RBP20.6■□□□□ 0.89
RPAIN-203ENST00000381209 NEK1Q96PY6 1258 aa20.6■□□□□ 0.89
RPAIN-203ENST00000381209 BSDC1Q9NW68 430 aaPredicted RBP20.6■□□□□ 0.89
RPAIN-203ENST00000381209 ZDHHC9Q9Y397 364 aa20.6■□□□□ 0.89
RPAIN-203ENST00000381209 TRAK2O60296 914 aa20.59■□□□□ 0.89
RPAIN-203ENST00000381209 BRD1O95696 1058 aa20.59■□□□□ 0.89
RPAIN-203ENST00000381209 RFC4P35249 363 aa20.59■□□□□ 0.89
RPAIN-203ENST00000381209 PKP1Q13835 747 aa20.59■□□□□ 0.89
RPAIN-203ENST00000381209 WASHC4Q2M389 1173 aa20.59■□□□□ 0.89
RPAIN-203ENST00000381209 PI16Q6UXB8 463 aa20.59■□□□□ 0.89
RPAIN-203ENST00000381209 C3orf67Q6ZVT6 689 aa20.59■□□□□ 0.89
RPAIN-203ENST00000381209 KRT27Q7Z3Y8 459 aa20.59■□□□□ 0.89
RPAIN-203ENST00000381209 NLRP3Q96P20 1036 aa20.59■□□□□ 0.89
RPAIN-203ENST00000381209 TAF6LQ9Y6J9 622 aa20.59■□□□□ 0.89
RPAIN-203ENST00000381209 HMGB1P09429 215 aaKnown RBP20.58■□□□□ 0.89
RPAIN-203ENST00000381209 ADD2P35612 726 aa20.58■□□□□ 0.89
RPAIN-203ENST00000381209 UBE3CQ15386 1083 aa20.58■□□□□ 0.89
RPAIN-203ENST00000381209 SKOR2Q2VWA4 1001 aaPredicted RBP20.58■□□□□ 0.89
RPAIN-203ENST00000381209 CTNNA3Q9UI47 895 aa20.58■□□□□ 0.89
RPAIN-203ENST00000381209 AMIGO3Q86WK7 504 aa20.58■□□□□ 0.88
RPAIN-203ENST00000381209 SPATA5Q8NB90 893 aa20.58■□□□□ 0.88
RPAIN-203ENST00000381209 PIH1D3Q9NQM4 214 aaKnown RBP20.58■□□□□ 0.88
RPAIN-203ENST00000381209 LRRC4BQ9NT99 713 aa20.58■□□□□ 0.88
RPAIN-203ENST00000381209 UBE4AQ14139 1066 aa20.57■□□□□ 0.88
RPAIN-203ENST00000381209 C4BP0C0L5 1744 aa20.56■□□□□ 0.88
RPAIN-203ENST00000381209 ARAP2Q8WZ64 1704 aa20.55■□□□□ 0.88
RPAIN-203ENST00000381209 LARGE1O95461 756 aa20.55■□□□□ 0.88
RPAIN-203ENST00000381209 ME3Q16798 604 aa20.55■□□□□ 0.88
RPAIN-203ENST00000381209 SLC9C2Q5TAH2 1124 aa20.55■□□□□ 0.88
RPAIN-203ENST00000381209 PUS7LQ9H0K6 701 aaKnown RBP20.55■□□□□ 0.88
RPAIN-203ENST00000381209 TPCN1Q9ULQ1 816 aa20.55■□□□□ 0.88
RPAIN-203ENST00000381209 SMC3Q9UQE7 1217 aa20.55■□□□□ 0.88
RPAIN-203ENST00000381209 SBF2Q86WG5 1849 aa20.55■□□□□ 0.88
RPAIN-203ENST00000381209 WDR33Q9C0J8 1336 aaKnown RBP20.55■□□□□ 0.88
RPAIN-203ENST00000381209 COL24A1Q17RW2 1714 aa20.55■□□□□ 0.88
RPAIN-203ENST00000381209 RASGRF1Q13972 1273 aa20.54■□□□□ 0.88
RPAIN-203ENST00000381209 TOB2Q14106 344 aaPredicted RBP20.54■□□□□ 0.88
RPAIN-203ENST00000381209 LARP6Q9BRS8 491 aaKnown RBP20.54■□□□□ 0.88
RPAIN-203ENST00000381209 MINPP1Q9UNW1 487 aa20.54■□□□□ 0.88
RPAIN-203ENST00000381209 CARMIL3Q8ND23 1372 aa20.54■□□□□ 0.88
RPAIN-203ENST00000381209 SNAP23O00161 211 aa20.53■□□□□ 0.88
RPAIN-203ENST00000381209 GPAA1O43292 621 aa20.53■□□□□ 0.88
RPAIN-203ENST00000381209 IDH1O75874 414 aaKnown RBP20.53■□□□□ 0.88
RPAIN-203ENST00000381209 PHF14O94880 888 aa20.53■□□□□ 0.88
RPAIN-203ENST00000381209 RPS8P62241 208 aaKnown RBP20.53■□□□□ 0.88
RPAIN-203ENST00000381209 STOX1Q6ZVD7 989 aa20.53■□□□□ 0.88
RPAIN-203ENST00000381209 CCDC83Q8IWF9 413 aa20.53■□□□□ 0.88
RPAIN-203ENST00000381209 FOXP2O15409 715 aa20.53■□□□□ 0.88
RPAIN-203ENST00000381209 PDIA4P13667 645 aaKnown RBP20.53■□□□□ 0.88
RPAIN-203ENST00000381209 PDE6AP16499 860 aa20.53■□□□□ 0.88
RPAIN-203ENST00000381209 BCAMP50895 628 aa20.53■□□□□ 0.88
RPAIN-203ENST00000381209 MAP3K12Q12852 859 aa20.53■□□□□ 0.88
RPAIN-203ENST00000381209 COL9A3Q14050 684 aaPredicted RBP20.53■□□□□ 0.88
RPAIN-203ENST00000381209 ZNF772Q68DY9 489 aaPredicted RBP20.53■□□□□ 0.88
RPAIN-203ENST00000381209 DHX32Q7L7V1 743 aaKnown RBP20.53■□□□□ 0.88
RPAIN-203ENST00000381209 CELF1Q92879 486 aaKnown RBP20.53■□□□□ 0.88
RPAIN-203ENST00000381209 ZNF804BA4D1E1 1349 aa20.52■□□□□ 0.88
RPAIN-203ENST00000381209 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.52■□□□□ 0.87
RPAIN-203ENST00000381209 TCRBV5S4A2TA0A5A2 114 aa20.52■□□□□ 0.87
RPAIN-203ENST00000381209 RBM6P78332 1123 aaKnown RBP20.52■□□□□ 0.87
RPAIN-203ENST00000381209 NFIXQ14938 502 aa20.52■□□□□ 0.87
RPAIN-203ENST00000381209 ANKRD2Q9GZV1 360 aa20.52■□□□□ 0.87
RPAIN-203ENST00000381209 GNL3LQ9NVN8 582 aaKnown RBP20.52■□□□□ 0.87
RPAIN-203ENST00000381209 ZNF532Q9HCE3 1301 aa20.52■□□□□ 0.87
RPAIN-203ENST00000381209 E7EWF7 191 aa20.51■□□□□ 0.87
RPAIN-203ENST00000381209 ST3GAL1Q11201 340 aa20.51■□□□□ 0.87
RPAIN-203ENST00000381209 IMMTQ16891 758 aaKnown RBP20.51■□□□□ 0.87
RPAIN-203ENST00000381209 TAF1LQ8IZX4 1826 aa20.51■□□□□ 0.87
RPAIN-203ENST00000381209 TRIM37O94972 964 aa20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms