RNA–Protein interactions for RNA: ENST00000380701.7

CCDC171-201, Transcript of coiled-coil domain containing 171, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC171, Length 6,512 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-201ENST00000380701 COMMD10Q9Y6G5 202 aa8.17□□□□□ -1.1
CCDC171-201ENST00000380701 KLF18A0A0U1RQI7 1052 aa8.17□□□□□ -1.1
CCDC171-201ENST00000380701 FSD2A1L4K1 749 aa8.17□□□□□ -1.1
CCDC171-201ENST00000380701 PDE8AO60658 829 aa8.17□□□□□ -1.1
CCDC171-201ENST00000380701 PPM1FP49593 454 aaPredicted RBP8.17□□□□□ -1.1
CCDC171-201ENST00000380701 SLC8A3P57103 927 aa8.17□□□□□ -1.1
CCDC171-201ENST00000380701 PAG1Q9NWQ8 432 aa8.17□□□□□ -1.1
CCDC171-201ENST00000380701 CYLC1P35663 651 aaPredicted RBP8.17□□□□□ -1.1
CCDC171-201ENST00000380701 BRAPQ7Z569 592 aa8.17□□□□□ -1.1
CCDC171-201ENST00000380701 KIF18AQ8NI77 898 aa8.17□□□□□ -1.1
CCDC171-201ENST00000380701 SPAG5Q96R06 1193 aa8.17□□□□□ -1.1
CCDC171-201ENST00000380701 SYNCQ9H7C4 482 aa8.17□□□□□ -1.1
CCDC171-201ENST00000380701 AOX1Q06278 1338 aa8.16□□□□□ -1.1
CCDC171-201ENST00000380701 HOXC9P31274 260 aa8.16□□□□□ -1.1
CCDC171-201ENST00000380701 CEP128Q6ZU80 1094 aa8.16□□□□□ -1.1
CCDC171-201ENST00000380701 GABPB2Q8TAK5 448 aaPredicted RBP8.16□□□□□ -1.1
CCDC171-201ENST00000380701 AS3MTQ9HBK9 375 aa8.16□□□□□ -1.1
CCDC171-201ENST00000380701 BTG4Q9NY30 223 aa8.16□□□□□ -1.1
CCDC171-201ENST00000380701 CLIP2Q9UDT6 1046 aa8.16□□□□□ -1.1
CCDC171-201ENST00000380701 CDAN1Q8IWY9 1227 aa8.16□□□□□ -1.1
CCDC171-201ENST00000380701 ATP2A1O14983 1001 aa8.16□□□□□ -1.1
CCDC171-201ENST00000380701 LPXNO60711 386 aa8.16□□□□□ -1.1
CCDC171-201ENST00000380701 CKAP4Q07065 602 aaKnown RBP8.16□□□□□ -1.1
CCDC171-201ENST00000380701 ACSBG1Q96GR2 724 aa8.16□□□□□ -1.1
CCDC171-201ENST00000380701 GPHNQ9NQX3 736 aaPredicted RBP8.16□□□□□ -1.1
CCDC171-201ENST00000380701 USP25Q9UHP3 1055 aa8.16□□□□□ -1.1
CCDC171-201ENST00000380701 NCKAP5LQ9HCH0 1330 aa8.16□□□□□ -1.1
CCDC171-201ENST00000380701 STAT6P42226 847 aa8.16□□□□□ -1.1
CCDC171-201ENST00000380701 NT5C2P49902 561 aa8.16□□□□□ -1.1
CCDC171-201ENST00000380701 PUM3Q15397 648 aaKnown RBP8.16□□□□□ -1.1
CCDC171-201ENST00000380701 NIM1KQ8IY84 436 aa8.16□□□□□ -1.1
CCDC171-201ENST00000380701 FAM107BQ9H098 131 aa8.16□□□□□ -1.1
CCDC171-201ENST00000380701 GRPEL1Q9HAV7 217 aa8.16□□□□□ -1.1
CCDC171-201ENST00000380701 SPC25Q9HBM1 224 aa8.16□□□□□ -1.1
CCDC171-201ENST00000380701 EXOC7Q9UPT5 735 aa8.16□□□□□ -1.1
CCDC171-201ENST00000380701 BMS1Q14692 1282 aaKnown RBP8.16□□□□□ -1.1
CCDC171-201ENST00000380701 KIF22Q14807 665 aa8.16□□□□□ -1.1
CCDC171-201ENST00000380701 TAF12Q16514 161 aa8.16□□□□□ -1.1
CCDC171-201ENST00000380701 USP48Q86UV5 1035 aa8.16□□□□□ -1.1
CCDC171-201ENST00000380701 TMEM87BQ96K49 555 aa8.16□□□□□ -1.1
CCDC171-201ENST00000380701 PKNOX2Q96KN3 472 aa8.16□□□□□ -1.1
CCDC171-201ENST00000380701 TRIM47Q96LD4 638 aa8.16□□□□□ -1.1
CCDC171-201ENST00000380701 VAT1LQ9HCJ6 419 aa8.16□□□□□ -1.1
CCDC171-201ENST00000380701 MAGI2Q86UL8 1455 aa8.15□□□□□ -1.1
CCDC171-201ENST00000380701 UBE2HP62256 183 aa8.15□□□□□ -1.1
CCDC171-201ENST00000380701 DCAF15Q66K64 600 aa8.15□□□□□ -1.1
CCDC171-201ENST00000380701 DPY19L2Q6NUT2 758 aa8.15□□□□□ -1.1
CCDC171-201ENST00000380701 CCDC77Q9BR77 488 aa8.15□□□□□ -1.1
CCDC171-201ENST00000380701 HIBADHP31937 336 aaKnown RBP8.15□□□□□ -1.1
CCDC171-201ENST00000380701 PTPN14Q15678 1187 aa8.15□□□□□ -1.1
CCDC171-201ENST00000380701 KIF4BQ2VIQ3 1234 aa8.15□□□□□ -1.1
CCDC171-201ENST00000380701 ALG1Q9BT22 464 aa8.15□□□□□ -1.1
CCDC171-201ENST00000380701 SNRKQ9NRH2 765 aa8.15□□□□□ -1.1
CCDC171-201ENST00000380701 PODXL2Q9NZ53 605 aa8.15□□□□□ -1.1
CCDC171-201ENST00000380701 RASAL2Q9UJF2 1139 aa8.15□□□□□ -1.1
CCDC171-201ENST00000380701 WDR62O43379 1518 aa8.15□□□□□ -1.1
CCDC171-201ENST00000380701 IBSPP21815 317 aaPredicted RBP8.15□□□□□ -1.1
CCDC171-201ENST00000380701 HAUS3Q68CZ6 603 aa8.15□□□□□ -1.1
CCDC171-201ENST00000380701 OTUD7BQ6GQQ9 843 aa8.15□□□□□ -1.1
CCDC171-201ENST00000380701 KLHL10Q6JEL2 608 aa8.15□□□□□ -1.1
CCDC171-201ENST00000380701 SPC24Q8NBT2 197 aa8.15□□□□□ -1.1
CCDC171-201ENST00000380701 DYDC1Q8WWB3 177 aa8.15□□□□□ -1.1
CCDC171-201ENST00000380701 MCM9Q9NXL9 1143 aa8.15□□□□□ -1.1
CCDC171-201ENST00000380701 POLKQ9UBT6 870 aa8.15□□□□□ -1.1
CCDC171-201ENST00000380701 IKBKGQ9Y6K9 419 aa8.15□□□□□ -1.1
CCDC171-201ENST00000380701 FAM13AO94988 1023 aa8.15□□□□□ -1.11
CCDC171-201ENST00000380701 CNKSR1Q969H4 720 aa8.15□□□□□ -1.11
CCDC171-201ENST00000380701 TCHPQ9BT92 498 aa8.15□□□□□ -1.11
CCDC171-201ENST00000380701 NOD1Q9Y239 953 aa8.15□□□□□ -1.11
CCDC171-201ENST00000380701 ZBED4O75132 1171 aa8.15□□□□□ -1.11
CCDC171-201ENST00000380701 PARP1P09874 1014 aaKnown RBP8.15□□□□□ -1.11
CCDC171-201ENST00000380701 IFFO1Q0D2I5 559 aa8.15□□□□□ -1.11
CCDC171-201ENST00000380701 CCDC14Q49A88 953 aa8.15□□□□□ -1.11
CCDC171-201ENST00000380701 MICALCLQ6ZW33 695 aa8.15□□□□□ -1.11
CCDC171-201ENST00000380701 STMN4Q9H169 189 aaPredicted RBP8.15□□□□□ -1.11
CCDC171-201ENST00000380701 SLAIN2Q9P270 581 aa8.15□□□□□ -1.11
CCDC171-201ENST00000380701 MROH5Q6ZUA9 1318 aa8.15□□□□□ -1.11
CCDC171-201ENST00000380701 H7C1D1 291 aa8.14□□□□□ -1.11
CCDC171-201ENST00000380701 FERMT3Q86UX7 667 aa8.14□□□□□ -1.11
CCDC171-201ENST00000380701 BIN2Q9UBW5 565 aaPredicted RBP8.14□□□□□ -1.11
CCDC171-201ENST00000380701 TRPC5Q9UL62 973 aaPredicted RBP8.14□□□□□ -1.11
CCDC171-201ENST00000380701 EYA2O00167 538 aa8.14□□□□□ -1.11
CCDC171-201ENST00000380701 DPP8Q6V1X1 898 aaPredicted RBP8.14□□□□□ -1.11
CCDC171-201ENST00000380701 HEATR3Q7Z4Q2 680 aa8.14□□□□□ -1.11
CCDC171-201ENST00000380701 TEX11Q8IYF3 940 aa8.14□□□□□ -1.11
CCDC171-201ENST00000380701 SELENOOQ9BVL4 669 aa8.14□□□□□ -1.11
CCDC171-201ENST00000380701 PLEKHG3A1L390 1219 aa8.14□□□□□ -1.11
CCDC171-201ENST00000380701 HMGB1P1B2RPK0 211 aaPredicted RBP8.14□□□□□ -1.11
CCDC171-201ENST00000380701 NDC80O14777 642 aa8.14□□□□□ -1.11
CCDC171-201ENST00000380701 POLR3GO15318 223 aaPredicted RBP8.14□□□□□ -1.11
CCDC171-201ENST00000380701 SMARCA5O60264 1052 aaPredicted RBP8.14□□□□□ -1.11
CCDC171-201ENST00000380701 CASQ1P31415 396 aa8.14□□□□□ -1.11
CCDC171-201ENST00000380701 SYKP43405 635 aa8.14□□□□□ -1.11
CCDC171-201ENST00000380701 SMTNP53814 917 aa8.14□□□□□ -1.11
CCDC171-201ENST00000380701 TMCO3Q6UWJ1 677 aa8.14□□□□□ -1.11
CCDC171-201ENST00000380701 LARGE2Q8N3Y3 721 aa8.14□□□□□ -1.11
CCDC171-201ENST00000380701 CTNNBL1Q8WYA6 563 aaPredicted RBP8.14□□□□□ -1.11
CCDC171-201ENST00000380701 DISP3Q9P2K9 1392 aa8.14□□□□□ -1.11
CCDC171-201ENST00000380701 SHTN1A0MZ66 631 aa8.14□□□□□ -1.11
CCDC171-201ENST00000380701 GJB2P29033 226 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms