RNA–Protein interactions for RNA: ENST00000380518.7

COL2A1-202, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene COL2A1, Length 5,071 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-202ENST00000380518 GIGYF2Q6Y7W6 1299 aaKnown RBP18.27■□□□□ 0.52
COL2A1-202ENST00000380518 PLCH2O75038 1416 aa18.27■□□□□ 0.52
COL2A1-202ENST00000380518 TTLL12Q14166 644 aaPredicted RBP18.27■□□□□ 0.52
COL2A1-202ENST00000380518 MAPKBP1O60336 1514 aa18.27■□□□□ 0.52
COL2A1-202ENST00000380518 SPDYE4A6NLX3 237 aa18.27■□□□□ 0.52
COL2A1-202ENST00000380518 HSF2BPO75031 334 aa18.27■□□□□ 0.52
COL2A1-202ENST00000380518 LMOD1P29536 600 aaPredicted RBP18.27■□□□□ 0.52
COL2A1-202ENST00000380518 ACTN2P35609 894 aa18.27■□□□□ 0.52
COL2A1-202ENST00000380518 DHX32Q7L7V1 743 aaKnown RBP18.27■□□□□ 0.52
COL2A1-202ENST00000380518 SETDB2Q96T68 719 aa18.27■□□□□ 0.52
COL2A1-202ENST00000380518 CHMLP26374 656 aa18.26■□□□□ 0.51
COL2A1-202ENST00000380518 PUF60Q9UHX1 559 aaKnown RBP18.26■□□□□ 0.51
COL2A1-202ENST00000380518 NAPAP54920 295 aa18.26■□□□□ 0.51
COL2A1-202ENST00000380518 HS1BP3Q53T59 392 aa18.26■□□□□ 0.51
COL2A1-202ENST00000380518 DHX58Q96C10 678 aa18.26■□□□□ 0.51
COL2A1-202ENST00000380518 TTC12Q9H892 705 aaPredicted RBP18.26■□□□□ 0.51
COL2A1-202ENST00000380518 TACC1O75410 805 aa18.26■□□□□ 0.51
COL2A1-202ENST00000380518 BRAPQ7Z569 592 aa18.26■□□□□ 0.51
COL2A1-202ENST00000380518 RTL9Q8NET4 1388 aa18.25■□□□□ 0.51
COL2A1-202ENST00000380518 DDX12PQ92771 950 aa18.25■□□□□ 0.51
COL2A1-202ENST00000380518 ZNF622Q969S3 477 aaKnown RBP eCLIP18.25■□□□□ 0.51
COL2A1-202ENST00000380518 GTPBP4Q9BZE4 634 aaKnown RBP18.25■□□□□ 0.51
COL2A1-202ENST00000380518 C6orf50Q9HD87 102 aa18.25■□□□□ 0.51
COL2A1-202ENST00000380518 RNF216Q9NWF9 866 aaPredicted RBP18.25■□□□□ 0.51
COL2A1-202ENST00000380518 ZRANB1Q9UGI0 708 aa18.25■□□□□ 0.51
COL2A1-202ENST00000380518 URB2Q14146 1524 aaKnown RBP18.25■□□□□ 0.51
COL2A1-202ENST00000380518 PTPDC1A2A3K4 754 aa18.25■□□□□ 0.51
COL2A1-202ENST00000380518 KRT13P13646 458 aa18.25■□□□□ 0.51
COL2A1-202ENST00000380518 CWF19L2Q2TBE0 894 aaKnown RBP18.25■□□□□ 0.51
COL2A1-202ENST00000380518 BICD1Q96G01 975 aa18.25■□□□□ 0.51
COL2A1-202ENST00000380518 NIP7Q9Y221 180 aaKnown RBP eCLIP18.25■□□□□ 0.51
COL2A1-202ENST00000380518 MSH6P52701 1360 aa18.25■□□□□ 0.51
COL2A1-202ENST00000380518 MAGEB6P1A0A0J9YX57 407 aa18.24■□□□□ 0.51
COL2A1-202ENST00000380518 SLU7O95391 586 aaKnown RBP18.24■□□□□ 0.51
COL2A1-202ENST00000380518 NF2P35240 595 aa18.24■□□□□ 0.51
COL2A1-202ENST00000380518 ATP6V1AP38606 617 aa18.24■□□□□ 0.51
COL2A1-202ENST00000380518 KRT83P78385 493 aa18.24■□□□□ 0.51
COL2A1-202ENST00000380518 FERMT1Q9BQL6 677 aa18.24■□□□□ 0.51
COL2A1-202ENST00000380518 DMRT2Q9Y5R5 561 aa18.24■□□□□ 0.51
COL2A1-202ENST00000380518 UGGT2Q9NYU1 1516 aa18.24■□□□□ 0.51
COL2A1-202ENST00000380518 A2MP01023 1474 aa18.24■□□□□ 0.51
COL2A1-202ENST00000380518 RUFY3Q7L099 469 aa18.24■□□□□ 0.51
COL2A1-202ENST00000380518 CCDC155Q8N6L0 562 aa18.24■□□□□ 0.51
COL2A1-202ENST00000380518 UTP14AQ9BVJ6 771 aaKnown RBP18.24■□□□□ 0.51
COL2A1-202ENST00000380518 SELENOOQ9BVL4 669 aa18.24■□□□□ 0.51
COL2A1-202ENST00000380518 MAP3K5Q99683 1374 aa18.24■□□□□ 0.51
COL2A1-202ENST00000380518 HOMER2Q9NSB8 354 aa18.24■□□□□ 0.51
COL2A1-202ENST00000380518 ZFYVE9O95405 1425 aa18.24■□□□□ 0.51
COL2A1-202ENST00000380518 APOBRQ0VD83 1088 aa18.24■□□□□ 0.51
COL2A1-202ENST00000380518 NPATQ14207 1427 aa18.24■□□□□ 0.51
COL2A1-202ENST00000380518 CCDC97Q96F63 343 aaPredicted RBP18.24■□□□□ 0.51
COL2A1-202ENST00000380518 TRERF1Q96PN7 1200 aa18.24■□□□□ 0.51
COL2A1-202ENST00000380518 MMRN2Q9H8L6 949 aa18.24■□□□□ 0.51
COL2A1-202ENST00000380518 PRPHP41219 470 aa18.23■□□□□ 0.51
COL2A1-202ENST00000380518 PHACTR3Q96KR7 559 aa18.23■□□□□ 0.51
COL2A1-202ENST00000380518 USP26Q9BXU7 913 aa18.23■□□□□ 0.51
COL2A1-202ENST00000380518 KRT24Q2M2I5 525 aa18.23■□□□□ 0.51
COL2A1-202ENST00000380518 NFATC2IPQ8NCF5 419 aa18.23■□□□□ 0.51
COL2A1-202ENST00000380518 RIMS2Q9UQ26 1411 aa18.23■□□□□ 0.51
COL2A1-202ENST00000380518 KRT86O43790 486 aa18.23■□□□□ 0.51
COL2A1-202ENST00000380518 KIF5AQ12840 1032 aa18.23■□□□□ 0.51
COL2A1-202ENST00000380518 ATL3Q6DD88 541 aa18.23■□□□□ 0.51
COL2A1-202ENST00000380518 CTAGE9A4FU28 777 aa18.22■□□□□ 0.51
COL2A1-202ENST00000380518 PTGS1P23219 599 aa18.22■□□□□ 0.51
COL2A1-202ENST00000380518 KRT79Q5XKE5 535 aa18.22■□□□□ 0.51
COL2A1-202ENST00000380518 ZNF608Q9ULD9 1512 aaPredicted RBP18.22■□□□□ 0.51
COL2A1-202ENST00000380518 SBNO2Q9Y2G9 1366 aa18.22■□□□□ 0.51
COL2A1-202ENST00000380518 MPHOSPH6Q99547 160 aaKnown RBP18.22■□□□□ 0.51
COL2A1-202ENST00000380518 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.22■□□□□ 0.51
COL2A1-202ENST00000380518 IKBKGQ9Y6K9 419 aa18.22■□□□□ 0.51
COL2A1-202ENST00000380518 TUBB4BP68371 445 aa18.22■□□□□ 0.51
COL2A1-202ENST00000380518 TFCP2Q12800 502 aa18.22■□□□□ 0.51
COL2A1-202ENST00000380518 LRRC59Q96AG4 307 aaKnown RBP18.22■□□□□ 0.51
COL2A1-202ENST00000380518 DRC1Q96MC2 740 aa18.22■□□□□ 0.51
COL2A1-202ENST00000380518 EYA1Q99502 592 aa18.22■□□□□ 0.51
COL2A1-202ENST00000380518 CCDC42Q96M95 316 aa18.21■□□□□ 0.51
COL2A1-202ENST00000380518 CARD14Q9BXL6 1004 aa18.21■□□□□ 0.51
COL2A1-202ENST00000380518 BICDL2A1A5D9 508 aa18.21■□□□□ 0.51
COL2A1-202ENST00000380518 KRT2P35908 639 aa18.21■□□□□ 0.51
COL2A1-202ENST00000380518 MCM6Q14566 821 aa18.21■□□□□ 0.51
COL2A1-202ENST00000380518 CHST3Q7LGC8 479 aa18.21■□□□□ 0.51
COL2A1-202ENST00000380518 ZNF804AQ7Z570 1209 aa18.21■□□□□ 0.51
COL2A1-202ENST00000380518 ATP10BO94823 1461 aa18.21■□□□□ 0.51
COL2A1-202ENST00000380518 DZIP3Q86Y13 1208 aaKnown RBP18.21■□□□□ 0.51
COL2A1-202ENST00000380518 DCAF5Q96JK2 942 aa18.21■□□□□ 0.51
COL2A1-202ENST00000380518 PLCG2P16885 1265 aa18.2■□□□□ 0.5
COL2A1-202ENST00000380518 MAPK8IP2Q13387 824 aaPredicted RBP18.2■□□□□ 0.5
COL2A1-202ENST00000380518 SMARCC2Q8TAQ2 1214 aa18.2■□□□□ 0.5
COL2A1-202ENST00000380518 LMBR1Q8WVP7 490 aa18.2■□□□□ 0.5
COL2A1-202ENST00000380518 IRS4O14654 1257 aaPredicted RBP18.2■□□□□ 0.5
COL2A1-202ENST00000380518 ZBTB7BO15156 539 aaPredicted RBP18.2■□□□□ 0.5
COL2A1-202ENST00000380518 IL2RBP14784 551 aa18.2■□□□□ 0.5
COL2A1-202ENST00000380518 GOLGA1Q92805 767 aa18.2■□□□□ 0.5
COL2A1-202ENST00000380518 IQUBQ8NA54 791 aa18.19■□□□□ 0.5
COL2A1-202ENST00000380518 RRP36Q96EU6 259 aaKnown RBP18.19■□□□□ 0.5
COL2A1-202ENST00000380518 NYXQ9GZU5 481 aa18.19■□□□□ 0.5
COL2A1-202ENST00000380518 RASAL2Q9UJF2 1139 aa18.19■□□□□ 0.5
COL2A1-202ENST00000380518 DDX21Q9NR30 783 aaKnown RBP eCLIP18.19■□□□□ 0.5
COL2A1-202ENST00000380518 MCM9Q9NXL9 1143 aa18.19■□□□□ 0.5
COL2A1-202ENST00000380518 GNA11P29992 359 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 1267.2 ms