RNA–Protein interactions for RNA: ENST00000380180.7

PDLIM5-205, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 2,020 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-205ENST00000380180 NYXQ9GZU5 481 aa23.78■■□□□ 1.4
PDLIM5-205ENST00000380180 SNAP23O00161 211 aa23.77■■□□□ 1.4
PDLIM5-205ENST00000380180 PHF14O94880 888 aa23.77■■□□□ 1.4
PDLIM5-205ENST00000380180 PHKA1P46020 1223 aa23.77■■□□□ 1.4
PDLIM5-205ENST00000380180 LRRFIP1Q32MZ4 808 aaKnown RBP23.77■■□□□ 1.4
PDLIM5-205ENST00000380180 TSGA10IPQ3SY00 556 aa23.77■■□□□ 1.4
PDLIM5-205ENST00000380180 VPS53Q5VIR6 699 aa23.77■■□□□ 1.4
PDLIM5-205ENST00000380180 INTS4Q96HW7 963 aaKnown RBP23.77■■□□□ 1.4
PDLIM5-205ENST00000380180 CDC5LQ99459 802 aaKnown RBP23.77■■□□□ 1.4
PDLIM5-205ENST00000380180 PDRG1Q9NUG6 133 aa23.77■■□□□ 1.4
PDLIM5-205ENST00000380180 TAF6LQ9Y6J9 622 aa23.77■■□□□ 1.4
PDLIM5-205ENST00000380180 U3KPZ7 1027 aaPredicted RBP23.77■■□□□ 1.4
PDLIM5-205ENST00000380180 RPAP1Q9BWH6 1393 aaPredicted RBP23.77■■□□□ 1.4
PDLIM5-205ENST00000380180 SLC5A1P13866 664 aa23.77■■□□□ 1.4
PDLIM5-205ENST00000380180 PSMA5P28066 241 aa23.77■■□□□ 1.4
PDLIM5-205ENST00000380180 RFC4P35249 363 aa23.77■■□□□ 1.4
PDLIM5-205ENST00000380180 NUCB2P80303 420 aa23.77■■□□□ 1.4
PDLIM5-205ENST00000380180 A0A1B0GUL6 1792 aa23.76■■□□□ 1.39
PDLIM5-205ENST00000380180 MAST3O60307 1309 aa23.76■■□□□ 1.39
PDLIM5-205ENST00000380180 ARID4AP29374 1257 aaPredicted RBP23.76■■□□□ 1.39
PDLIM5-205ENST00000380180 UBR3Q6ZT12 1888 aa23.76■■□□□ 1.39
PDLIM5-205ENST00000380180 NBPF5PQ86XG9 351 aaPredicted RBP23.76■■□□□ 1.39
PDLIM5-205ENST00000380180 LARP6Q9BRS8 491 aaKnown RBP23.76■■□□□ 1.39
PDLIM5-205ENST00000380180 CHRNDQ07001 517 aa23.76■■□□□ 1.39
PDLIM5-205ENST00000380180 LIMCH1Q9UPQ0 1083 aa23.76■■□□□ 1.39
PDLIM5-205ENST00000380180 ZFYP08048 801 aaPredicted RBP23.75■■□□□ 1.39
PDLIM5-205ENST00000380180 UQCRFS1P1P0C7P4 283 aa23.75■■□□□ 1.39
PDLIM5-205ENST00000380180 OSBP2Q969R2 916 aa23.75■■□□□ 1.39
PDLIM5-205ENST00000380180 LAMA4Q16363 1823 aa23.74■■□□□ 1.39
PDLIM5-205ENST00000380180 M0R2C6 588 aa23.74■■□□□ 1.39
PDLIM5-205ENST00000380180 TRIM37O94972 964 aa23.74■■□□□ 1.39
PDLIM5-205ENST00000380180 CYP2E1P05181 493 aaPredicted RBP23.74■■□□□ 1.39
PDLIM5-205ENST00000380180 PKP1Q13835 747 aa23.74■■□□□ 1.39
PDLIM5-205ENST00000380180 COL9A3Q14050 684 aaPredicted RBP23.74■■□□□ 1.39
PDLIM5-205ENST00000380180 TPTE2Q6XPS3 522 aa23.74■■□□□ 1.39
PDLIM5-205ENST00000380180 ANKRD18AQ8IVF6 992 aa23.74■■□□□ 1.39
PDLIM5-205ENST00000380180 DSCC1Q9BVC3 393 aa23.74■■□□□ 1.39
PDLIM5-205ENST00000380180 WASHC4Q2M389 1173 aa23.73■■□□□ 1.39
PDLIM5-205ENST00000380180 CYP21A2P08686 494 aa23.72■■□□□ 1.39
PDLIM5-205ENST00000380180 HSPD1P10809 573 aaKnown RBP23.72■■□□□ 1.39
PDLIM5-205ENST00000380180 TTF1Q15361 905 aaPredicted RBP23.72■■□□□ 1.39
PDLIM5-205ENST00000380180 BLOC1S2Q6QNY1 142 aa23.72■■□□□ 1.39
PDLIM5-205ENST00000380180 NLRP3Q96P20 1036 aa23.72■■□□□ 1.39
PDLIM5-205ENST00000380180 GBP4Q96PP9 640 aa23.72■■□□□ 1.39
PDLIM5-205ENST00000380180 KRT32Q14532 448 aa23.71■■□□□ 1.39
PDLIM5-205ENST00000380180 CCDC24Q8N4L8 307 aa23.71■■□□□ 1.39
PDLIM5-205ENST00000380180 DDX24Q9GZR7 859 aaKnown RBP eCLIP23.71■■□□□ 1.39
PDLIM5-205ENST00000380180 BSDC1Q9NW68 430 aaPredicted RBP23.71■■□□□ 1.39
PDLIM5-205ENST00000380180 SLC27A3Q5K4L6 730 aa23.71■■□□□ 1.39
PDLIM5-205ENST00000380180 APPBP2Q92624 585 aa23.71■■□□□ 1.39
PDLIM5-205ENST00000380180 PIH1D3Q9NQM4 214 aaKnown RBP23.71■■□□□ 1.39
PDLIM5-205ENST00000380180 RPS6KB1P23443 525 aa23.7■■□□□ 1.38
PDLIM5-205ENST00000380180 CLEC17AQ6ZS10 378 aa23.7■■□□□ 1.38
PDLIM5-205ENST00000380180 CELF1Q92879 486 aaKnown RBP23.7■■□□□ 1.38
PDLIM5-205ENST00000380180 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.69■■□□□ 1.38
PDLIM5-205ENST00000380180 DDX11L8A8MPP1 907 aa23.69■■□□□ 1.38
PDLIM5-205ENST00000380180 ADRA2BP18089 450 aa23.69■■□□□ 1.38
PDLIM5-205ENST00000380180 SPATA5Q8NB90 893 aa23.69■■□□□ 1.38
PDLIM5-205ENST00000380180 PUS7LQ9H0K6 701 aaKnown RBP23.69■■□□□ 1.38
PDLIM5-205ENST00000380180 ZDHHC9Q9Y397 364 aa23.69■■□□□ 1.38
PDLIM5-205ENST00000380180 DOCK2Q92608 1830 aa23.69■■□□□ 1.38
PDLIM5-205ENST00000380180 LARGE1O95461 756 aa23.69■■□□□ 1.38
PDLIM5-205ENST00000380180 DEKP35659 375 aaKnown RBP23.69■■□□□ 1.38
PDLIM5-205ENST00000380180 BCAMP50895 628 aa23.69■■□□□ 1.38
PDLIM5-205ENST00000380180 ZSCAN25Q6NSZ9 544 aa23.69■■□□□ 1.38
PDLIM5-205ENST00000380180 ADD2P35612 726 aa23.68■■□□□ 1.38
PDLIM5-205ENST00000380180 RBM6P78332 1123 aaKnown RBP23.68■■□□□ 1.38
PDLIM5-205ENST00000380180 RASGRF1Q13972 1273 aa23.68■■□□□ 1.38
PDLIM5-205ENST00000380180 SLC9C2Q5TAH2 1124 aa23.68■■□□□ 1.38
PDLIM5-205ENST00000380180 ZSCAN31Q96LW9 406 aaPredicted RBP23.68■■□□□ 1.38
PDLIM5-205ENST00000380180 TCEANC2Q96MN5 208 aa23.68■■□□□ 1.38
PDLIM5-205ENST00000380180 NEK1Q96PY6 1258 aa23.68■■□□□ 1.38
PDLIM5-205ENST00000380180 ALDH8A1Q9H2A2 487 aaPredicted RBP23.68■■□□□ 1.38
PDLIM5-205ENST00000380180 MINPP1Q9UNW1 487 aa23.68■■□□□ 1.38
PDLIM5-205ENST00000380180 IDH1O75874 414 aaKnown RBP23.67■■□□□ 1.38
PDLIM5-205ENST00000380180 NFIXQ14938 502 aa23.67■■□□□ 1.38
PDLIM5-205ENST00000380180 ZNF772Q68DY9 489 aaPredicted RBP23.67■■□□□ 1.38
PDLIM5-205ENST00000380180 RPS8P62241 208 aaKnown RBP23.66■■□□□ 1.38
PDLIM5-205ENST00000380180 GSE1Q14687 1217 aa23.66■■□□□ 1.38
PDLIM5-205ENST00000380180 CARMIL3Q8ND23 1372 aa23.66■■□□□ 1.38
PDLIM5-205ENST00000380180 NPHP1O15259 732 aa23.66■■□□□ 1.38
PDLIM5-205ENST00000380180 BAG4O95429 457 aaKnown RBP23.66■■□□□ 1.38
PDLIM5-205ENST00000380180 SH2B1Q9NRF2 756 aaPredicted RBP23.66■■□□□ 1.38
PDLIM5-205ENST00000380180 TPCN1Q9ULQ1 816 aa23.66■■□□□ 1.38
PDLIM5-205ENST00000380180 TNRC6CQ9HCJ0 1690 aaKnown RBP23.65■■□□□ 1.38
PDLIM5-205ENST00000380180 A0A0G2JLW4 131 aa23.65■■□□□ 1.38
PDLIM5-205ENST00000380180 WTIPA6NIX2 430 aaPredicted RBP23.65■■□□□ 1.38
PDLIM5-205ENST00000380180 FOXP2O15409 715 aa23.65■■□□□ 1.38
PDLIM5-205ENST00000380180 ANKRD1Q15327 319 aa23.65■■□□□ 1.38
PDLIM5-205ENST00000380180 UBE3CQ15386 1083 aa23.65■■□□□ 1.38
PDLIM5-205ENST00000380180 ME3Q16798 604 aa23.65■■□□□ 1.38
PDLIM5-205ENST00000380180 STOX1Q6ZVD7 989 aa23.65■■□□□ 1.38
PDLIM5-205ENST00000380180 TOB2Q14106 344 aaPredicted RBP23.64■■□□□ 1.38
PDLIM5-205ENST00000380180 UBE4AQ14139 1066 aa23.64■■□□□ 1.38
PDLIM5-205ENST00000380180 WWC3Q9ULE0 1092 aa23.64■■□□□ 1.38
PDLIM5-205ENST00000380180 ZSCAN21Q9Y5A6 473 aaPredicted RBP23.64■■□□□ 1.38
PDLIM5-205ENST00000380180 GPAA1O43292 621 aa23.64■■□□□ 1.37
PDLIM5-205ENST00000380180 PDE6AP16499 860 aa23.64■■□□□ 1.37
PDLIM5-205ENST00000380180 TM4SF1P30408 202 aa23.64■■□□□ 1.37
PDLIM5-205ENST00000380180 PROM2Q8N271 834 aa23.64■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms