RNA–Protein interactions for RNA: ENST00000379016.7

HIPK3-202, Transcript of homeodomain interacting protein kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HIPK3, Length 7,345 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3-202ENST00000379016 CYLC1P35663 651 aaPredicted RBP14.98□□□□□ -0.01
HIPK3-202ENST00000379016 FBXW4P57775 412 aa14.98□□□□□ -0.01
HIPK3-202ENST00000379016 RRAGBQ5VZM2 374 aa14.98□□□□□ -0.01
HIPK3-202ENST00000379016 MYD88Q99836 296 aa14.98□□□□□ -0.01
HIPK3-202ENST00000379016 VPS18Q9P253 973 aa14.98□□□□□ -0.01
HIPK3-202ENST00000379016 HNRNPCL2B2RXH8 293 aa14.98□□□□□ -0.01
HIPK3-202ENST00000379016 HNRNPCL1O60812 293 aaKnown RBP14.98□□□□□ -0.01
HIPK3-202ENST00000379016 PDZD8Q8NEN9 1154 aa14.98□□□□□ -0.01
HIPK3-202ENST00000379016 SPDYE2BA6NHP3 402 aa14.98□□□□□ -0.01
HIPK3-202ENST00000379016 SPDYE6P0CI01 402 aa14.98□□□□□ -0.01
HIPK3-202ENST00000379016 ZCRB1Q8TBF4 217 aaKnown RBP14.98□□□□□ -0.01
HIPK3-202ENST00000379016 RNF8O76064 485 aa14.98□□□□□ -0.01
HIPK3-202ENST00000379016 CSPG5O95196 566 aa14.98□□□□□ -0.01
HIPK3-202ENST00000379016 CAPN2P17655 700 aa14.98□□□□□ -0.01
HIPK3-202ENST00000379016 VPS41P49754 854 aa14.98□□□□□ -0.01
HIPK3-202ENST00000379016 IFT74Q96LB3 600 aa14.98□□□□□ -0.01
HIPK3-202ENST00000379016 VCXQ9H320 206 aa14.97□□□□□ -0.01
HIPK3-202ENST00000379016 ARFGAP3Q9NP61 516 aa14.97□□□□□ -0.01
HIPK3-202ENST00000379016 BUB1BO60566 1050 aaPredicted RBP14.97□□□□□ -0.01
HIPK3-202ENST00000379016 SLC8A3P57103 927 aa14.97□□□□□ -0.01
HIPK3-202ENST00000379016 IFIT5Q13325 482 aaKnown RBP14.97□□□□□ -0.01
HIPK3-202ENST00000379016 MICU3Q86XE3 530 aa14.97□□□□□ -0.01
HIPK3-202ENST00000379016 CABP1Q9NZU7 370 aa14.97□□□□□ -0.01
HIPK3-202ENST00000379016 PALM3A6NDB9 673 aaPredicted RBP14.97□□□□□ -0.01
HIPK3-202ENST00000379016 CHMP2AO43633 222 aa14.97□□□□□ -0.01
HIPK3-202ENST00000379016 ABL1P00519 1130 aa14.97□□□□□ -0.01
HIPK3-202ENST00000379016 NEK1Q96PY6 1258 aa14.97□□□□□ -0.01
HIPK3-202ENST00000379016 IVLP07476 585 aa14.97□□□□□ -0.01
HIPK3-202ENST00000379016 PDE4BQ07343 736 aa14.97□□□□□ -0.01
HIPK3-202ENST00000379016 PICALMQ13492 652 aa14.97□□□□□ -0.01
HIPK3-202ENST00000379016 UBASH3AP57075 661 aa14.97□□□□□ -0.01
HIPK3-202ENST00000379016 GSDMDP57764 484 aa14.97□□□□□ -0.01
HIPK3-202ENST00000379016 FYB2Q5VWT5 728 aa14.97□□□□□ -0.01
HIPK3-202ENST00000379016 MIER3Q7Z3K6 550 aa14.97□□□□□ -0.01
HIPK3-202ENST00000379016 CHD1LQ86WJ1 897 aa14.97□□□□□ -0.01
HIPK3-202ENST00000379016 LRRC27Q9C0I9 530 aa14.97□□□□□ -0.01
HIPK3-202ENST00000379016 BLVRAP53004 296 aa14.97□□□□□ -0.01
HIPK3-202ENST00000379016 STX1AQ16623 288 aa14.97□□□□□ -0.01
HIPK3-202ENST00000379016 TMOD3Q9NYL9 352 aa14.97□□□□□ -0.01
HIPK3-202ENST00000379016 CNGA1P29973 690 aa14.96□□□□□ -0.01
HIPK3-202ENST00000379016 RNF41Q9H4P4 317 aaPredicted RBP14.96□□□□□ -0.01
HIPK3-202ENST00000379016 PARD3BQ8TEW8 1205 aa14.96□□□□□ -0.01
HIPK3-202ENST00000379016 CDK19Q9BWU1 502 aa14.96□□□□□ -0.01
HIPK3-202ENST00000379016 HAND2P61296 217 aa14.96□□□□□ -0.01
HIPK3-202ENST00000379016 CCDC125Q86Z20 511 aa14.96□□□□□ -0.01
HIPK3-202ENST00000379016 NSMCE1Q8WV22 266 aa14.96□□□□□ -0.01
HIPK3-202ENST00000379016 TSPY3P0CV98 308 aa14.96□□□□□ -0.01
HIPK3-202ENST00000379016 TSPY8P0CW00 308 aa14.96□□□□□ -0.01
HIPK3-202ENST00000379016 CNTLNQ9NXG0 1405 aa14.96□□□□□ -0.01
HIPK3-202ENST00000379016 GOLIM4O00461 696 aa14.96□□□□□ -0.02
HIPK3-202ENST00000379016 CTAGE5O15320 804 aa14.96□□□□□ -0.02
HIPK3-202ENST00000379016 TMEM57Q8N5G2 664 aa14.96□□□□□ -0.02
HIPK3-202ENST00000379016 VEZTQ9HBM0 779 aa14.96□□□□□ -0.02
HIPK3-202ENST00000379016 OLA1Q9NTK5 396 aaKnown RBP14.96□□□□□ -0.02
HIPK3-202ENST00000379016 BAG3O95817 575 aa14.96□□□□□ -0.02
HIPK3-202ENST00000379016 HPDP32754 393 aaPredicted RBP14.96□□□□□ -0.02
HIPK3-202ENST00000379016 LMNTD2Q8IXW0 634 aa14.96□□□□□ -0.02
HIPK3-202ENST00000379016 NKIRAS1Q9NYS0 192 aa14.96□□□□□ -0.02
HIPK3-202ENST00000379016 CTAGE9A4FU28 777 aa14.95□□□□□ -0.02
HIPK3-202ENST00000379016 HP1BP3Q5SSJ5 553 aaPredicted RBP14.95□□□□□ -0.02
HIPK3-202ENST00000379016 MCUR1Q96AQ8 359 aa14.95□□□□□ -0.02
HIPK3-202ENST00000379016 TRMT112Q9UI30 125 aaKnown RBP14.95□□□□□ -0.02
HIPK3-202ENST00000379016 ZSCAN30Q86W11 494 aa14.95□□□□□ -0.02
HIPK3-202ENST00000379016 RAP1GDS1P52306 607 aa14.95□□□□□ -0.02
HIPK3-202ENST00000379016 NXNQ6DKJ4 435 aa14.95□□□□□ -0.02
HIPK3-202ENST00000379016 SMARCC2Q8TAQ2 1214 aa14.95□□□□□ -0.02
HIPK3-202ENST00000379016 EXOC6BQ9Y2D4 811 aa14.95□□□□□ -0.02
HIPK3-202ENST00000379016 PDE6AP16499 860 aa14.95□□□□□ -0.02
HIPK3-202ENST00000379016 DCAF17Q5H9S7 520 aaPredicted RBP14.95□□□□□ -0.02
HIPK3-202ENST00000379016 LEO1Q8WVC0 666 aaPredicted RBP14.95□□□□□ -0.02
HIPK3-202ENST00000379016 RILPQ96NA2 401 aa14.95□□□□□ -0.02
HIPK3-202ENST00000379016 MTRF1LQ9UGC7 380 aaKnown RBP14.95□□□□□ -0.02
HIPK3-202ENST00000379016 CCDC18Q5T9S5 1454 aa14.95□□□□□ -0.02
HIPK3-202ENST00000379016 RAB11FIP3O75154 756 aa14.95□□□□□ -0.02
HIPK3-202ENST00000379016 CASP2P42575 452 aa14.95□□□□□ -0.02
HIPK3-202ENST00000379016 PHEXP78562 749 aa14.95□□□□□ -0.02
HIPK3-202ENST00000379016 THUMPD2Q9BTF0 503 aaKnown RBP14.95□□□□□ -0.02
HIPK3-202ENST00000379016 ZNF408Q9H9D4 720 aa14.95□□□□□ -0.02
HIPK3-202ENST00000379016 CTAGE15A4D2H0 777 aa14.94□□□□□ -0.02
HIPK3-202ENST00000379016 BACH1O14867 736 aa14.94□□□□□ -0.02
HIPK3-202ENST00000379016 STK10O94804 968 aaKnown RBP14.94□□□□□ -0.02
HIPK3-202ENST00000379016 CTAGE8P0CG41 777 aa14.94□□□□□ -0.02
HIPK3-202ENST00000379016 CCDC62Q6P9F0 684 aa14.94□□□□□ -0.02
HIPK3-202ENST00000379016 CTAGE4Q8IX94 777 aa14.94□□□□□ -0.02
HIPK3-202ENST00000379016 LMBR1Q8WVP7 490 aa14.94□□□□□ -0.02
HIPK3-202ENST00000379016 CCDC8Q9H0W5 538 aaPredicted RBP14.94□□□□□ -0.02
HIPK3-202ENST00000379016 EBAG9O00559 213 aa14.94□□□□□ -0.02
HIPK3-202ENST00000379016 MUM1L1Q5H9M0 696 aa14.94□□□□□ -0.02
HIPK3-202ENST00000379016 PRDM2Q13029 1718 aa14.94□□□□□ -0.02
HIPK3-202ENST00000379016 COG7P83436 770 aa14.94□□□□□ -0.02
HIPK3-202ENST00000379016 SRGAP1Q7Z6B7 1085 aa14.94□□□□□ -0.02
HIPK3-202ENST00000379016 GDPD2Q9HCC8 539 aa14.94□□□□□ -0.02
HIPK3-202ENST00000379016 PHLDB2Q86SQ0 1253 aa14.94□□□□□ -0.02
HIPK3-202ENST00000379016 PNISRQ8TF01 805 aaKnown RBP14.94□□□□□ -0.02
HIPK3-202ENST00000379016 BEGAINQ9BUH8 593 aa14.94□□□□□ -0.02
HIPK3-202ENST00000379016 PKD2L1Q9P0L9 805 aa14.94□□□□□ -0.02
HIPK3-202ENST00000379016 POLD1P28340 1107 aa14.94□□□□□ -0.02
HIPK3-202ENST00000379016 NGLY1Q96IV0 654 aa14.94□□□□□ -0.02
HIPK3-202ENST00000379016 ADCY5O95622 1261 aa14.93□□□□□ -0.02
HIPK3-202ENST00000379016 DCLK2Q8N568 766 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms