RNA–Protein interactions for RNA: ENST00000378809.8

RAB3IP-203, Transcript of RAB3A interacting protein, humanhuman

TSL 5

Gene RAB3IP, Length 2,008 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-203ENST00000378809 ZPR1O75312 459 aa17.61■□□□□ 0.41
RAB3IP-203ENST00000378809 HSPD1P10809 573 aaKnown RBP17.61■□□□□ 0.41
RAB3IP-203ENST00000378809 SKOR2Q2VWA4 1001 aaPredicted RBP17.61■□□□□ 0.41
RAB3IP-203ENST00000378809 TBC1D9BQ66K14 1250 aa17.61■□□□□ 0.41
RAB3IP-203ENST00000378809 NEK1Q96PY6 1258 aa17.61■□□□□ 0.41
RAB3IP-203ENST00000378809 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.61■□□□□ 0.41
RAB3IP-203ENST00000378809 SRP68Q9UHB9 627 aaKnown RBP17.61■□□□□ 0.41
RAB3IP-203ENST00000378809 RTCBQ9Y3I0 505 aaKnown RBP17.61■□□□□ 0.41
RAB3IP-203ENST00000378809 SNAP23O00161 211 aa17.6■□□□□ 0.41
RAB3IP-203ENST00000378809 RPS6KA4O75676 772 aa17.6■□□□□ 0.41
RAB3IP-203ENST00000378809 BRD1O95696 1058 aa17.6■□□□□ 0.41
RAB3IP-203ENST00000378809 RC3H1Q5TC82 1133 aaKnown RBP17.6■□□□□ 0.41
RAB3IP-203ENST00000378809 BTAF1O14981 1849 aa17.6■□□□□ 0.41
RAB3IP-203ENST00000378809 ZNF831Q5JPB2 1677 aa17.6■□□□□ 0.41
RAB3IP-203ENST00000378809 ME3Q16798 604 aa17.6■□□□□ 0.41
RAB3IP-203ENST00000378809 CDC5LQ99459 802 aaKnown RBP17.6■□□□□ 0.41
RAB3IP-203ENST00000378809 TPCN1Q9ULQ1 816 aa17.6■□□□□ 0.41
RAB3IP-203ENST00000378809 LRP5O75197 1615 aa17.6■□□□□ 0.41
RAB3IP-203ENST00000378809 IDH1O75874 414 aaKnown RBP17.59■□□□□ 0.41
RAB3IP-203ENST00000378809 UQCRFS1P1P0C7P4 283 aa17.59■□□□□ 0.41
RAB3IP-203ENST00000378809 FGFR2P21802 821 aa17.59■□□□□ 0.41
RAB3IP-203ENST00000378809 TTF1Q15361 905 aaPredicted RBP17.59■□□□□ 0.41
RAB3IP-203ENST00000378809 NECAB1Q8N987 351 aa17.59■□□□□ 0.41
RAB3IP-203ENST00000378809 ZNF512BQ96KM6 892 aaPredicted RBP17.59■□□□□ 0.41
RAB3IP-203ENST00000378809 NARFQ9UHQ1 456 aa17.59■□□□□ 0.41
RAB3IP-203ENST00000378809 NHSQ6T4R5 1651 aa17.59■□□□□ 0.41
RAB3IP-203ENST00000378809 ZSCAN25Q6NSZ9 544 aa17.59■□□□□ 0.41
RAB3IP-203ENST00000378809 APPBP2Q92624 585 aa17.59■□□□□ 0.41
RAB3IP-203ENST00000378809 CHAMP1Q96JM3 812 aa17.59■□□□□ 0.41
RAB3IP-203ENST00000378809 SETDB2Q96T68 719 aa17.59■□□□□ 0.41
RAB3IP-203ENST00000378809 BCL2L12Q9HB09 334 aa17.59■□□□□ 0.41
RAB3IP-203ENST00000378809 BCORQ6W2J9 1755 aa17.58■□□□□ 0.41
RAB3IP-203ENST00000378809 WDR33Q9C0J8 1336 aaKnown RBP17.58■□□□□ 0.41
RAB3IP-203ENST00000378809 RTL9Q8NET4 1388 aa17.58■□□□□ 0.4
RAB3IP-203ENST00000378809 DTNBO60941 627 aa17.58■□□□□ 0.4
RAB3IP-203ENST00000378809 PHF14O94880 888 aa17.58■□□□□ 0.4
RAB3IP-203ENST00000378809 FGD1P98174 961 aa17.58■□□□□ 0.4
RAB3IP-203ENST00000378809 FOXD4L6Q3SYB3 417 aaPredicted RBP17.58■□□□□ 0.4
RAB3IP-203ENST00000378809 FOXD4L3Q6VB84 417 aaPredicted RBP17.58■□□□□ 0.4
RAB3IP-203ENST00000378809 DDX49Q9Y6V7 483 aaKnown RBP17.58■□□□□ 0.4
RAB3IP-203ENST00000378809 DDX60Q8IY21 1712 aaKnown RBP17.58■□□□□ 0.4
RAB3IP-203ENST00000378809 ARID4AP29374 1257 aaPredicted RBP17.57■□□□□ 0.4
RAB3IP-203ENST00000378809 CHRNDQ07001 517 aa17.57■□□□□ 0.4
RAB3IP-203ENST00000378809 SLC9C2Q5TAH2 1124 aa17.57■□□□□ 0.4
RAB3IP-203ENST00000378809 C3orf67Q6ZVT6 689 aa17.57■□□□□ 0.4
RAB3IP-203ENST00000378809 PUS7LQ9H0K6 701 aaKnown RBP17.57■□□□□ 0.4
RAB3IP-203ENST00000378809 NPHP1O15259 732 aa17.57■□□□□ 0.4
RAB3IP-203ENST00000378809 GJB2P29033 226 aa17.57■□□□□ 0.4
RAB3IP-203ENST00000378809 TOB2Q14106 344 aaPredicted RBP17.57■□□□□ 0.4
RAB3IP-203ENST00000378809 NBPF5PQ86XG9 351 aaPredicted RBP17.57■□□□□ 0.4
RAB3IP-203ENST00000378809 ANKRD18AQ8IVF6 992 aa17.57■□□□□ 0.4
RAB3IP-203ENST00000378809 NYXQ9GZU5 481 aa17.57■□□□□ 0.4
RAB3IP-203ENST00000378809 QTRT2Q9H974 415 aaKnown RBP17.57■□□□□ 0.4
RAB3IP-203ENST00000378809 PIH1D3Q9NQM4 214 aaKnown RBP17.57■□□□□ 0.4
RAB3IP-203ENST00000378809 ATRNO75882 1429 aa17.57■□□□□ 0.4
RAB3IP-203ENST00000378809 PRPF40AO75400 957 aaKnown RBP17.56■□□□□ 0.4
RAB3IP-203ENST00000378809 STK3Q13188 491 aa17.56■□□□□ 0.4
RAB3IP-203ENST00000378809 STOX1Q6ZVD7 989 aa17.56■□□□□ 0.4
RAB3IP-203ENST00000378809 ARHGEF1Q92888 912 aaKnown RBP17.56■□□□□ 0.4
RAB3IP-203ENST00000378809 A0A0G2JLW4 131 aa17.55■□□□□ 0.4
RAB3IP-203ENST00000378809 NCLP19338 710 aaKnown RBP17.55■□□□□ 0.4
RAB3IP-203ENST00000378809 ADD2P35612 726 aa17.55■□□□□ 0.4
RAB3IP-203ENST00000378809 TTLL5Q6EMB2 1281 aa17.55■□□□□ 0.4
RAB3IP-203ENST00000378809 Q6ZUG5 572 aa17.55■□□□□ 0.4
RAB3IP-203ENST00000378809 SPATA5Q8NB90 893 aa17.55■□□□□ 0.4
RAB3IP-203ENST00000378809 LRRC2Q9BYS8 371 aa17.55■□□□□ 0.4
RAB3IP-203ENST00000378809 ALDH8A1Q9H2A2 487 aaPredicted RBP17.55■□□□□ 0.4
RAB3IP-203ENST00000378809 RGL2O15211 777 aa17.55■□□□□ 0.4
RAB3IP-203ENST00000378809 GPAA1O43292 621 aa17.55■□□□□ 0.4
RAB3IP-203ENST00000378809 ONECUT3O60422 494 aaPredicted RBP17.55■□□□□ 0.4
RAB3IP-203ENST00000378809 HMGB1P09429 215 aaKnown RBP17.55■□□□□ 0.4
RAB3IP-203ENST00000378809 RFC4P35249 363 aa17.55■□□□□ 0.4
RAB3IP-203ENST00000378809 AMIGO3Q86WK7 504 aa17.55■□□□□ 0.4
RAB3IP-203ENST00000378809 STX6O43752 255 aa17.54■□□□□ 0.4
RAB3IP-203ENST00000378809 SYT1P21579 422 aa17.54■□□□□ 0.4
RAB3IP-203ENST00000378809 BCAMP50895 628 aa17.54■□□□□ 0.4
RAB3IP-203ENST00000378809 ST3GAL1Q11201 340 aa17.54■□□□□ 0.4
RAB3IP-203ENST00000378809 RASGRF1Q13972 1273 aa17.54■□□□□ 0.4
RAB3IP-203ENST00000378809 SF3B3Q15393 1217 aaKnown RBP17.54■□□□□ 0.4
RAB3IP-203ENST00000378809 CCDC24Q8N4L8 307 aa17.54■□□□□ 0.4
RAB3IP-203ENST00000378809 LMBRD1Q9NUN5 540 aa17.54■□□□□ 0.4
RAB3IP-203ENST00000378809 CTNNA3Q9UI47 895 aa17.54■□□□□ 0.4
RAB3IP-203ENST00000378809 SCN7AQ01118 1682 aa17.54■□□□□ 0.4
RAB3IP-203ENST00000378809 E7EWF7 191 aa17.54■□□□□ 0.4
RAB3IP-203ENST00000378809 IMMTQ16891 758 aaKnown RBP17.54■□□□□ 0.4
RAB3IP-203ENST00000378809 LAMB2P55268 1798 aa17.53■□□□□ 0.4
RAB3IP-203ENST00000378809 ZNF532Q9HCE3 1301 aa17.53■□□□□ 0.4
RAB3IP-203ENST00000378809 GOLGA6L3A6NEY3 463 aa17.53■□□□□ 0.4
RAB3IP-203ENST00000378809 ZSCAN22P10073 491 aaPredicted RBP17.53■□□□□ 0.4
RAB3IP-203ENST00000378809 HAND2P61296 217 aa17.53■□□□□ 0.4
RAB3IP-203ENST00000378809 KLHL40Q2TBA0 621 aa17.53■□□□□ 0.4
RAB3IP-203ENST00000378809 TRAPPC3LQ5T215 181 aa17.53■□□□□ 0.4
RAB3IP-203ENST00000378809 FAM196AQ6ZSG2 479 aa17.53■□□□□ 0.4
RAB3IP-203ENST00000378809 DHX32Q7L7V1 743 aaKnown RBP17.53■□□□□ 0.4
RAB3IP-203ENST00000378809 NLRP3Q96P20 1036 aa17.53■□□□□ 0.4
RAB3IP-203ENST00000378809 BCL11BQ9C0K0 894 aaPredicted RBP17.53■□□□□ 0.4
RAB3IP-203ENST00000378809 PDE6AP16499 860 aa17.52■□□□□ 0.4
RAB3IP-203ENST00000378809 TPTE2Q6XPS3 522 aa17.52■□□□□ 0.4
RAB3IP-203ENST00000378809 BRF1Q92994 677 aa17.52■□□□□ 0.4
RAB3IP-203ENST00000378809 WWC3Q9ULE0 1092 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms