RNA–Protein interactions for RNA: ENST00000378513.7

RER1-203, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

TSL 3 BASIC

Gene RER1, Length 3,000 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-203ENST00000378513 NKX2-3Q8TAU0 364 aa18.09■□□□□ 0.49
RER1-203ENST00000378513 TAF7LQ5H9L4 462 aa18.09■□□□□ 0.49
RER1-203ENST00000378513 ELP1O95163 1332 aa18.09■□□□□ 0.49
RER1-203ENST00000378513 CCDC144BQ3MJ40 725 aa18.09■□□□□ 0.49
RER1-203ENST00000378513 ISM2Q6H9L7 571 aa18.09■□□□□ 0.49
RER1-203ENST00000378513 CCDC144CPQ8IYA2 1237 aa18.09■□□□□ 0.49
RER1-203ENST00000378513 ADD1P35611 737 aaKnown RBP18.08■□□□□ 0.49
RER1-203ENST00000378513 SIPA1L3O60292 1781 aaPredicted RBP18.08■□□□□ 0.48
RER1-203ENST00000378513 PDIA3P30101 505 aaKnown RBP18.08■□□□□ 0.48
RER1-203ENST00000378513 ZAP70P43403 619 aa18.08■□□□□ 0.48
RER1-203ENST00000378513 ZMYM1Q5SVZ6 1142 aa18.08■□□□□ 0.48
RER1-203ENST00000378513 CEP126Q9P2H0 1117 aa18.08■□□□□ 0.48
RER1-203ENST00000378513 A0A1B0GVL5 298 aa18.07■□□□□ 0.48
RER1-203ENST00000378513 SNAP23O00161 211 aa18.07■□□□□ 0.48
RER1-203ENST00000378513 PFKFB2O60825 505 aa18.07■□□□□ 0.48
RER1-203ENST00000378513 CCDC57Q2TAC2 916 aa18.07■□□□□ 0.48
RER1-203ENST00000378513 TTC39AQ5SRH9 613 aa18.07■□□□□ 0.48
RER1-203ENST00000378513 MYRIPQ8NFW9 859 aa18.07■□□□□ 0.48
RER1-203ENST00000378513 PUS7LQ9H0K6 701 aaKnown RBP18.07■□□□□ 0.48
RER1-203ENST00000378513 DDX19AQ9NUU7 478 aaKnown RBP18.07■□□□□ 0.48
RER1-203ENST00000378513 JCADQ9P266 1359 aa18.07■□□□□ 0.48
RER1-203ENST00000378513 RNF113AO15541 343 aaKnown RBP18.07■□□□□ 0.48
RER1-203ENST00000378513 ZNF710Q8N1W2 664 aa18.07■□□□□ 0.48
RER1-203ENST00000378513 XAGE2Q96GT9 111 aa18.07■□□□□ 0.48
RER1-203ENST00000378513 CCDC94Q9BW85 323 aaPredicted RBP18.07■□□□□ 0.48
RER1-203ENST00000378513 INCENPQ9NQS7 918 aa18.07■□□□□ 0.48
RER1-203ENST00000378513 ASAP1Q9ULH1 1129 aa18.07■□□□□ 0.48
RER1-203ENST00000378513 BIN1O00499 593 aa18.07■□□□□ 0.48
RER1-203ENST00000378513 IL15P40933 162 aaPredicted RBP18.07■□□□□ 0.48
RER1-203ENST00000378513 FILIP1Q7Z7B0 1213 aa18.07■□□□□ 0.48
RER1-203ENST00000378513 ILDR1Q86SU0 546 aaPredicted RBP18.07■□□□□ 0.48
RER1-203ENST00000378513 AIFM3Q96NN9 605 aa18.07■□□□□ 0.48
RER1-203ENST00000378513 RIOK3O14730 519 aaKnown RBP18.06■□□□□ 0.48
RER1-203ENST00000378513 FSIP1Q8NA03 581 aa18.06■□□□□ 0.48
RER1-203ENST00000378513 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.06■□□□□ 0.48
RER1-203ENST00000378513 AFDNP55196 1824 aaKnown RBP18.06■□□□□ 0.48
RER1-203ENST00000378513 DNAJC10Q8IXB1 793 aa18.06■□□□□ 0.48
RER1-203ENST00000378513 HELBQ8NG08 1087 aaPredicted RBP18.06■□□□□ 0.48
RER1-203ENST00000378513 ZNF592Q92610 1267 aa18.06■□□□□ 0.48
RER1-203ENST00000378513 CLIP2Q9UDT6 1046 aa18.06■□□□□ 0.48
RER1-203ENST00000378513 FDPSP14324 419 aaKnown RBP18.05■□□□□ 0.48
RER1-203ENST00000378513 ZNF75DP51815 510 aa18.05■□□□□ 0.48
RER1-203ENST00000378513 NAA30Q147X3 362 aaPredicted RBP18.05■□□□□ 0.48
RER1-203ENST00000378513 FOXP2O15409 715 aa18.05■□□□□ 0.48
RER1-203ENST00000378513 EXOSC10Q01780 885 aaKnown RBP18.05■□□□□ 0.48
RER1-203ENST00000378513 SMARCC2Q8TAQ2 1214 aa18.05■□□□□ 0.48
RER1-203ENST00000378513 TRPM3Q9HCF6 1732 aaPredicted RBP18.05■□□□□ 0.48
RER1-203ENST00000378513 SH3TC1Q8TE82 1336 aa18.04■□□□□ 0.48
RER1-203ENST00000378513 FGAP02671 866 aa18.04■□□□□ 0.48
RER1-203ENST00000378513 ATP2B3Q16720 1220 aa18.04■□□□□ 0.48
RER1-203ENST00000378513 CACTINQ8WUQ7 758 aaKnown RBP18.04■□□□□ 0.48
RER1-203ENST00000378513 SYTL4Q96C24 671 aaPredicted RBP18.04■□□□□ 0.48
RER1-203ENST00000378513 ALDH8A1Q9H2A2 487 aaPredicted RBP18.04■□□□□ 0.48
RER1-203ENST00000378513 CFAP45Q9UL16 551 aa18.04■□□□□ 0.48
RER1-203ENST00000378513 KIF3AQ9Y496 699 aa18.04■□□□□ 0.48
RER1-203ENST00000378513 MST1RQ04912 1400 aa18.04■□□□□ 0.48
RER1-203ENST00000378513 KLF18A0A0U1RQI7 1052 aa18.04■□□□□ 0.48
RER1-203ENST00000378513 SMAP1Q8IYB5 467 aaPredicted RBP18.04■□□□□ 0.48
RER1-203ENST00000378513 CLIC4Q9Y696 253 aa18.04■□□□□ 0.48
RER1-203ENST00000378513 SCN11AQ9UI33 1791 aa18.04■□□□□ 0.48
RER1-203ENST00000378513 PALLDQ8WX93 1383 aa18.04■□□□□ 0.48
RER1-203ENST00000378513 PHRF1Q9P1Y6 1649 aaKnown RBP18.04■□□□□ 0.48
RER1-203ENST00000378513 UBE2Q2LH0YL09 131 aa18.04■□□□□ 0.48
RER1-203ENST00000378513 APPP05067 770 aa18.04■□□□□ 0.48
RER1-203ENST00000378513 MTERF4Q7Z6M4 381 aaKnown RBP18.04■□□□□ 0.48
RER1-203ENST00000378513 GOLGA8BA8MQT2 603 aa18.03■□□□□ 0.48
RER1-203ENST00000378513 GOLGA6L6A8MZA4 724 aa18.03■□□□□ 0.48
RER1-203ENST00000378513 PTPN21Q16825 1174 aa18.03■□□□□ 0.48
RER1-203ENST00000378513 HELLSQ9NRZ9 838 aa18.03■□□□□ 0.48
RER1-203ENST00000378513 SPTLC3Q9NUV7 552 aa18.03■□□□□ 0.48
RER1-203ENST00000378513 GOLGA6L19H0YKK7 550 aa18.03■□□□□ 0.48
RER1-203ENST00000378513 HLFQ16534 295 aa18.03■□□□□ 0.48
RER1-203ENST00000378513 CCDC73Q6ZRK6 1079 aa18.03■□□□□ 0.48
RER1-203ENST00000378513 SPATA31A3Q5VYP0 1347 aa18.02■□□□□ 0.48
RER1-203ENST00000378513 U2AF2P26368 475 aaKnown RBP eCLIP18.02■□□□□ 0.486e-7■□□□□ 11
RER1-203ENST00000378513 EVA1CP58658 441 aa18.02■□□□□ 0.48
RER1-203ENST00000378513 ZSCAN25Q6NSZ9 544 aa18.02■□□□□ 0.48
RER1-203ENST00000378513 SENP2Q9HC62 589 aa18.02■□□□□ 0.48
RER1-203ENST00000378513 BECN2A8MW95 431 aa18.02■□□□□ 0.48
RER1-203ENST00000378513 PRC1O43663 620 aa18.02■□□□□ 0.48
RER1-203ENST00000378513 KINO60870 393 aaKnown RBP18.02■□□□□ 0.48
RER1-203ENST00000378513 CCDC158Q5M9N0 1113 aa18.02■□□□□ 0.48
RER1-203ENST00000378513 SDF4Q9BRK5 362 aa18.02■□□□□ 0.48
RER1-203ENST00000378513 MYL10Q9BUA6 226 aa18.02■□□□□ 0.48
RER1-203ENST00000378513 DSCC1Q9BVC3 393 aa18.02■□□□□ 0.48
RER1-203ENST00000378513 ZSCAN16Q9H4T2 348 aaPredicted RBP18.02■□□□□ 0.48
RER1-203ENST00000378513 BCL2L12Q9HB09 334 aa18.02■□□□□ 0.48
RER1-203ENST00000378513 TRMT1Q9NXH9 659 aaKnown RBP18.02■□□□□ 0.48
RER1-203ENST00000378513 IDH1O75874 414 aaKnown RBP18.01■□□□□ 0.47
RER1-203ENST00000378513 SNW1Q13573 536 aaKnown RBP18.01■□□□□ 0.47
RER1-203ENST00000378513 SF3A1Q15459 793 aaKnown RBP18.01■□□□□ 0.47
RER1-203ENST00000378513 CCDC191Q8NCU4 936 aa18.01■□□□□ 0.47
RER1-203ENST00000378513 PCDHA7Q9UN72 937 aa18.01■□□□□ 0.47
RER1-203ENST00000378513 MRC1P22897 1456 aa18.01■□□□□ 0.47
RER1-203ENST00000378513 USP27XA6NNY8 438 aa18.01■□□□□ 0.47
RER1-203ENST00000378513 MARCKSP29966 332 aaPredicted RBP18.01■□□□□ 0.47
RER1-203ENST00000378513 AOPEPQ8N6M6 819 aa18.01■□□□□ 0.47
RER1-203ENST00000378513 CARMIL3Q8ND23 1372 aa18.01■□□□□ 0.47
RER1-203ENST00000378513 CHAF1AQ13111 956 aaPredicted RBP18.01■□□□□ 0.47
RER1-203ENST00000378513 METTL24Q5JXM2 366 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms