RNA–Protein interactions for RNA: ENST00000378391.6

PRDM16-203, Transcript of PR/SET domain 16, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRDM16, Length 5,447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-203ENST00000378391 CFAP57Q96MR6 1250 aa16.55■□□□□ 0.24
PRDM16-203ENST00000378391 GSTTP1A0A1W2PQM5 241 aa16.54■□□□□ 0.24
PRDM16-203ENST00000378391 HAND2P61296 217 aa16.54■□□□□ 0.24
PRDM16-203ENST00000378391 CKAP4Q07065 602 aaKnown RBP16.54■□□□□ 0.24
PRDM16-203ENST00000378391 DNA2P51530 1060 aa16.54■□□□□ 0.24
PRDM16-203ENST00000378391 LDHAL6AQ6ZMR3 332 aa16.54■□□□□ 0.24
PRDM16-203ENST00000378391 ZSWIM4Q9H7M6 989 aa16.54■□□□□ 0.24
PRDM16-203ENST00000378391 RMND1Q9NWS8 449 aa16.54■□□□□ 0.24
PRDM16-203ENST00000378391 YTHDC2Q9H6S0 1430 aaKnown RBP16.54■□□□□ 0.24
PRDM16-203ENST00000378391 KLF18A0A0U1RQI7 1052 aa16.54■□□□□ 0.24
PRDM16-203ENST00000378391 TYRO3Q06418 890 aa16.54■□□□□ 0.24
PRDM16-203ENST00000378391 MFSD6Q6ZSS7 791 aa16.54■□□□□ 0.24
PRDM16-203ENST00000378391 DNAJC25Q9H1X3 360 aa16.54■□□□□ 0.24
PRDM16-203ENST00000378391 JADE2Q9NQC1 790 aa16.54■□□□□ 0.24
PRDM16-203ENST00000378391 CWC25Q9NXE8 425 aaPredicted RBP16.54■□□□□ 0.24
PRDM16-203ENST00000378391 TNIP1Q15025 636 aa16.54■□□□□ 0.24
PRDM16-203ENST00000378391 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.54■□□□□ 0.24
PRDM16-203ENST00000378391 SLC26A6Q9BXS9 759 aa16.54■□□□□ 0.24
PRDM16-203ENST00000378391 SPHKAPQ2M3C7 1700 aa16.54■□□□□ 0.24
PRDM16-203ENST00000378391 ALDH1L1O75891 902 aa16.53■□□□□ 0.24
PRDM16-203ENST00000378391 KRI1Q8N9T8 703 aaKnown RBP16.53■□□□□ 0.24
PRDM16-203ENST00000378391 CTAGE15A4D2H0 777 aa16.53■□□□□ 0.24
PRDM16-203ENST00000378391 RIOK3O14730 519 aaKnown RBP16.53■□□□□ 0.24
PRDM16-203ENST00000378391 CTAGE8P0CG41 777 aa16.53■□□□□ 0.24
PRDM16-203ENST00000378391 TUBB4BP68371 445 aa16.53■□□□□ 0.24
PRDM16-203ENST00000378391 CTAGE6Q86UF2 777 aa16.53■□□□□ 0.24
PRDM16-203ENST00000378391 CTAGE4Q8IX94 777 aa16.53■□□□□ 0.24
PRDM16-203ENST00000378391 CFAP65Q6ZU64 1925 aaKnown RBP16.53■□□□□ 0.24
PRDM16-203ENST00000378391 CEP63Q96MT8 703 aa16.53■□□□□ 0.24
PRDM16-203ENST00000378391 SNRKQ9NRH2 765 aa16.53■□□□□ 0.24
PRDM16-203ENST00000378391 NSFL1CQ9UNZ2 370 aaKnown RBP16.53■□□□□ 0.24
PRDM16-203ENST00000378391 PALD1Q9ULE6 856 aa16.53■□□□□ 0.24
PRDM16-203ENST00000378391 CCDC40Q4G0X9 1142 aa16.52■□□□□ 0.24
PRDM16-203ENST00000378391 IGSF3O75054 1194 aa16.52■□□□□ 0.24
PRDM16-203ENST00000378391 IDEP14735 1019 aa16.52■□□□□ 0.24
PRDM16-203ENST00000378391 GOPCQ9HD26 462 aa16.52■□□□□ 0.24
PRDM16-203ENST00000378391 TET3O43151 1660 aa16.52■□□□□ 0.24
PRDM16-203ENST00000378391 IVLP07476 585 aa16.52■□□□□ 0.24
PRDM16-203ENST00000378391 NBPF7P0C2Y1 421 aaPredicted RBP16.52■□□□□ 0.24
PRDM16-203ENST00000378391 CETN1Q12798 172 aa16.52■□□□□ 0.24
PRDM16-203ENST00000378391 LRCH2Q5VUJ6 765 aa16.52■□□□□ 0.24
PRDM16-203ENST00000378391 UBA5Q9GZZ9 404 aa16.52■□□□□ 0.24
PRDM16-203ENST00000378391 RTL1A6NKG5 1358 aa16.52■□□□□ 0.23
PRDM16-203ENST00000378391 AKR1B10O60218 316 aa16.52■□□□□ 0.23
PRDM16-203ENST00000378391 BICDL1Q6ZP65 573 aa16.52■□□□□ 0.23
PRDM16-203ENST00000378391 CNPY4Q8N129 248 aa16.52■□□□□ 0.23
PRDM16-203ENST00000378391 TMTC2Q8N394 836 aa16.52■□□□□ 0.23
PRDM16-203ENST00000378391 AMOTL2Q9Y2J4 779 aa16.52■□□□□ 0.23
PRDM16-203ENST00000378391 NPATQ14207 1427 aa16.52■□□□□ 0.23
PRDM16-203ENST00000378391 CPA1P15085 419 aa16.52■□□□□ 0.23
PRDM16-203ENST00000378391 CYLC1P35663 651 aaPredicted RBP16.52■□□□□ 0.23
PRDM16-203ENST00000378391 AOPEPQ8N6M6 819 aa16.52■□□□□ 0.23
PRDM16-203ENST00000378391 LRRC27Q9C0I9 530 aa16.52■□□□□ 0.23
PRDM16-203ENST00000378391 MCMDC2Q4G0Z9 681 aa16.51■□□□□ 0.23
PRDM16-203ENST00000378391 CLEC17AQ6ZS10 378 aa16.51■□□□□ 0.23
PRDM16-203ENST00000378391 TTC41PQ6P2S7 1318 aa16.51■□□□□ 0.23
PRDM16-203ENST00000378391 IQGAP1P46940 1657 aa16.51■□□□□ 0.23
PRDM16-203ENST00000378391 DDX46Q7L014 1031 aaKnown RBP16.51■□□□□ 0.23
PRDM16-203ENST00000378391 TCEANC2Q96MN5 208 aa16.51■□□□□ 0.23
PRDM16-203ENST00000378391 TEX13AQ9BXU3 409 aaPredicted RBP16.51■□□□□ 0.23
PRDM16-203ENST00000378391 CCDC144CPQ8IYA2 1237 aa16.51■□□□□ 0.23
PRDM16-203ENST00000378391 ANKRD24Q8TF21 1146 aa16.51■□□□□ 0.23
PRDM16-203ENST00000378391 ALG1Q9BT22 464 aa16.51■□□□□ 0.23
PRDM16-203ENST00000378391 ZBTB43O43298 467 aa16.51■□□□□ 0.23
PRDM16-203ENST00000378391 ANKRD13DQ6ZTN6 518 aa16.51■□□□□ 0.23
PRDM16-203ENST00000378391 ZBTB3Q9H5J0 574 aa16.51■□□□□ 0.23
PRDM16-203ENST00000378391 IQSEC2Q5JU85 1478 aa16.5■□□□□ 0.23
PRDM16-203ENST00000378391 FOXO3O43524 673 aa16.5■□□□□ 0.23
PRDM16-203ENST00000378391 TTC31Q49AM3 519 aaPredicted RBP16.5■□□□□ 0.23
PRDM16-203ENST00000378391 IFNL2Q8IZJ0 200 aa16.5■□□□□ 0.23
PRDM16-203ENST00000378391 TRIM47Q96LD4 638 aa16.5■□□□□ 0.23
PRDM16-203ENST00000378391 TMOD2Q9NZR1 351 aa16.5■□□□□ 0.23
PRDM16-203ENST00000378391 UQCRFS1P1P0C7P4 283 aa16.5■□□□□ 0.23
PRDM16-203ENST00000378391 TRIM21P19474 475 aaKnown RBP16.5■□□□□ 0.23
PRDM16-203ENST00000378391 DDIT3P35638 169 aa16.5■□□□□ 0.23
PRDM16-203ENST00000378391 CHL1O00533 1208 aa16.5■□□□□ 0.23
PRDM16-203ENST00000378391 IFI16Q16666 785 aaKnown RBP16.5■□□□□ 0.23
PRDM16-203ENST00000378391 SPECC1LQ69YQ0 1117 aa16.5■□□□□ 0.23
PRDM16-203ENST00000378391 SNX14Q9Y5W7 946 aa16.5■□□□□ 0.23
PRDM16-203ENST00000378391 MATR3P43243 847 aaKnown RBP eCLIP16.5■□□□□ 0.232e-9■■■■■ 33.8
PRDM16-203ENST00000378391 CEP112Q8N8E3 955 aa16.5■□□□□ 0.23
PRDM16-203ENST00000378391 ATP5J2-PTCD1G3V325 749 aa16.49■□□□□ 0.23
PRDM16-203ENST00000378391 PPFIA3O75145 1194 aa16.49■□□□□ 0.23
PRDM16-203ENST00000378391 SNRPA1P09661 255 aaKnown RBP16.49■□□□□ 0.23
PRDM16-203ENST00000378391 U2AF2P26368 475 aaKnown RBP eCLIP16.49■□□□□ 0.23
PRDM16-203ENST00000378391 MAATS1Q7Z4T9 603 aa16.49■□□□□ 0.23
PRDM16-203ENST00000378391 RNF17Q9BXT8 1623 aaKnown RBP16.49■□□□□ 0.23
PRDM16-203ENST00000378391 PDE4BQ07343 736 aa16.49■□□□□ 0.23
PRDM16-203ENST00000378391 Q6ZUG5 572 aa16.49■□□□□ 0.23
PRDM16-203ENST00000378391 BCL2L12Q9HB09 334 aa16.49■□□□□ 0.23
PRDM16-203ENST00000378391 PTCH1Q13635 1447 aa16.49■□□□□ 0.23
PRDM16-203ENST00000378391 ASXL2Q76L83 1435 aa16.49■□□□□ 0.23
PRDM16-203ENST00000378391 NCOA3Q9Y6Q9 1424 aa16.49■□□□□ 0.23
PRDM16-203ENST00000378391 ABCA6Q8N139 1617 aa16.49■□□□□ 0.23
PRDM16-203ENST00000378391 KIF3CO14782 793 aa16.49■□□□□ 0.23
PRDM16-203ENST00000378391 NOP2P46087 812 aaKnown RBP16.49■□□□□ 0.23
PRDM16-203ENST00000378391 MTHFSDQ2M296 383 aaKnown RBP16.49■□□□□ 0.23
PRDM16-203ENST00000378391 CRACR2BQ8N4Y2 399 aaPredicted RBP16.49■□□□□ 0.23
PRDM16-203ENST00000378391 HSF2BPO75031 334 aa16.49■□□□□ 0.23
PRDM16-203ENST00000378391 HMGB2P26583 209 aaKnown RBP16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms