RNA–Protein interactions for RNA: ENST00000378387.3

ARHGEF39-201, Transcript of Rho guanine nucleotide exchange factor 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ARHGEF39, Length 3,769 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39-201ENST00000378387 ZNF622Q969S3 477 aaKnown RBP eCLIP12.1□□□□□ -0.47
ARHGEF39-201ENST00000378387 CAPZA3Q96KX2 299 aa12.1□□□□□ -0.47
ARHGEF39-201ENST00000378387 SSH2Q76I76 1423 aa12.1□□□□□ -0.47
ARHGEF39-201ENST00000378387 RPS6KB1P23443 525 aa12.09□□□□□ -0.47
ARHGEF39-201ENST00000378387 BRD3Q15059 726 aa12.09□□□□□ -0.47
ARHGEF39-201ENST00000378387 EDC3Q96F86 508 aaKnown RBP12.09□□□□□ -0.47
ARHGEF39-201ENST00000378387 PHAXQ9H814 394 aaKnown RBP12.09□□□□□ -0.47
ARHGEF39-201ENST00000378387 SLC24A3Q9HC58 644 aa12.09□□□□□ -0.47
ARHGEF39-201ENST00000378387 STAP2Q9UGK3 403 aa12.09□□□□□ -0.47
ARHGEF39-201ENST00000378387 RIMS2Q9UQ26 1411 aa12.09□□□□□ -0.47
ARHGEF39-201ENST00000378387 ARHGAP6O43182 974 aa12.09□□□□□ -0.47
ARHGEF39-201ENST00000378387 IL13P35225 146 aa12.09□□□□□ -0.47
ARHGEF39-201ENST00000378387 EFCAB13Q8IY85 973 aa12.09□□□□□ -0.47
ARHGEF39-201ENST00000378387 OTUD6BQ8N6M0 293 aa12.09□□□□□ -0.47
ARHGEF39-201ENST00000378387 EVI5LQ96CN4 794 aa12.09□□□□□ -0.47
ARHGEF39-201ENST00000378387 PARP3Q9Y6F1 533 aa12.09□□□□□ -0.47
ARHGEF39-201ENST00000378387 ATP10DQ9P241 1426 aa12.09□□□□□ -0.47
ARHGEF39-201ENST00000378387 MED14O60244 1454 aa12.09□□□□□ -0.47
ARHGEF39-201ENST00000378387 PTPDC1A2A3K4 754 aa12.09□□□□□ -0.47
ARHGEF39-201ENST00000378387 CHL1O00533 1208 aa12.09□□□□□ -0.47
ARHGEF39-201ENST00000378387 NUTM2GQ5VZR2 741 aa12.09□□□□□ -0.47
ARHGEF39-201ENST00000378387 BCAS4Q8TDM0 211 aa12.09□□□□□ -0.47
ARHGEF39-201ENST00000378387 FANCLQ9NW38 375 aa12.09□□□□□ -0.47
ARHGEF39-201ENST00000378387 TTC41PQ6P2S7 1318 aa12.09□□□□□ -0.47
ARHGEF39-201ENST00000378387 PIK3R4Q99570 1358 aa12.09□□□□□ -0.47
ARHGEF39-201ENST00000378387 A0A087WUV0 522 aaPredicted RBP12.08□□□□□ -0.47
ARHGEF39-201ENST00000378387 GOLGA6L9A6NEM1 432 aa12.08□□□□□ -0.47
ARHGEF39-201ENST00000378387 TMEM232C9JQI7 657 aa12.08□□□□□ -0.47
ARHGEF39-201ENST00000378387 CCDC175P0C221 793 aa12.08□□□□□ -0.47
ARHGEF39-201ENST00000378387 NBPF7P0C2Y1 421 aaPredicted RBP12.08□□□□□ -0.47
ARHGEF39-201ENST00000378387 COL9A3Q14050 684 aaPredicted RBP12.08□□□□□ -0.47
ARHGEF39-201ENST00000378387 CASP8Q14790 479 aa12.08□□□□□ -0.47
ARHGEF39-201ENST00000378387 OSBPL5Q9H0X9 879 aaPredicted RBP12.08□□□□□ -0.47
ARHGEF39-201ENST00000378387 RNF40O75150 1001 aa12.08□□□□□ -0.48
ARHGEF39-201ENST00000378387 MATR3P43243 847 aaKnown RBP eCLIP12.08□□□□□ -0.48
ARHGEF39-201ENST00000378387 OSCARQ8IYS5 282 aa12.08□□□□□ -0.48
ARHGEF39-201ENST00000378387 RIN2Q8WYP3 895 aaPredicted RBP12.08□□□□□ -0.48
ARHGEF39-201ENST00000378387 USP44Q9H0E7 712 aa12.08□□□□□ -0.48
ARHGEF39-201ENST00000378387 PCDHA7Q9UN72 937 aa12.08□□□□□ -0.48
ARHGEF39-201ENST00000378387 CCDC129Q6ZRS4 1044 aa12.08□□□□□ -0.48
ARHGEF39-201ENST00000378387 CEP112Q8N8E3 955 aa12.08□□□□□ -0.48
ARHGEF39-201ENST00000378387 CCDC148Q8NFR7 591 aa12.08□□□□□ -0.48
ARHGEF39-201ENST00000378387 DPF2Q92785 391 aa12.08□□□□□ -0.48
ARHGEF39-201ENST00000378387 ERBB3P21860 1342 aa12.08□□□□□ -0.48
ARHGEF39-201ENST00000378387 CTAGE9A4FU28 777 aa12.07□□□□□ -0.48
ARHGEF39-201ENST00000378387 ZNF202O95125 648 aa12.07□□□□□ -0.48
ARHGEF39-201ENST00000378387 SYKP43405 635 aa12.07□□□□□ -0.48
ARHGEF39-201ENST00000378387 LRCH2Q5VUJ6 765 aa12.07□□□□□ -0.48
ARHGEF39-201ENST00000378387 C8orf76Q96K31 380 aa12.07□□□□□ -0.48
ARHGEF39-201ENST00000378387 FAM53CQ9NYF3 392 aa12.07□□□□□ -0.48
ARHGEF39-201ENST00000378387 TAF6LQ9Y6J9 622 aa12.07□□□□□ -0.48
ARHGEF39-201ENST00000378387 POTEB2H3BUK9 544 aa12.07□□□□□ -0.48
ARHGEF39-201ENST00000378387 HIP1O00291 1037 aa12.07□□□□□ -0.48
ARHGEF39-201ENST00000378387 EIF5P55010 431 aaKnown RBP12.07□□□□□ -0.48
ARHGEF39-201ENST00000378387 ST3GAL1Q11201 340 aa12.07□□□□□ -0.48
ARHGEF39-201ENST00000378387 HSP90AB2PQ58FF8 381 aa12.07□□□□□ -0.48
ARHGEF39-201ENST00000378387 TOGARAM2Q6ZUX3 1019 aa12.07□□□□□ -0.48
ARHGEF39-201ENST00000378387 PI4KAP2A4QPH2 592 aa12.07□□□□□ -0.48
ARHGEF39-201ENST00000378387 SPTLC2O15270 562 aa12.07□□□□□ -0.48
ARHGEF39-201ENST00000378387 TFRCP02786 760 aaKnown RBP12.07□□□□□ -0.48
ARHGEF39-201ENST00000378387 MYL5Q02045 173 aa12.07□□□□□ -0.48
ARHGEF39-201ENST00000378387 CCDC93Q567U6 631 aa12.07□□□□□ -0.48
ARHGEF39-201ENST00000378387 TRMT44Q8IYL2 757 aaKnown RBP12.07□□□□□ -0.48
ARHGEF39-201ENST00000378387 PI4KAP1Q8N8J0 262 aa12.07□□□□□ -0.48
ARHGEF39-201ENST00000378387 TTC21AQ8NDW8 1320 aa12.07□□□□□ -0.48
ARHGEF39-201ENST00000378387 NCKAP5LQ9HCH0 1330 aa12.07□□□□□ -0.48
ARHGEF39-201ENST00000378387 PPFIA4O75335 1185 aa12.06□□□□□ -0.48
ARHGEF39-201ENST00000378387 CORO7P57737 925 aa12.06□□□□□ -0.48
ARHGEF39-201ENST00000378387 PI4K2BQ8TCG2 481 aa12.06□□□□□ -0.48
ARHGEF39-201ENST00000378387 TM6SF1Q9BZW5 370 aa12.06□□□□□ -0.48
ARHGEF39-201ENST00000378387 AKAP2Q9Y2D5 859 aa12.06□□□□□ -0.48
ARHGEF39-201ENST00000378387 A0A0D9SFI3 127 aa12.06□□□□□ -0.48
ARHGEF39-201ENST00000378387 GOLIM4O00461 696 aa12.06□□□□□ -0.48
ARHGEF39-201ENST00000378387 CALRP27797 417 aaKnown RBP12.06□□□□□ -0.48
ARHGEF39-201ENST00000378387 RESTQ13127 1097 aa12.06□□□□□ -0.48
ARHGEF39-201ENST00000378387 CCDC70Q6NSX1 233 aa12.06□□□□□ -0.48
ARHGEF39-201ENST00000378387 FAM76AQ8TAV0 307 aa12.06□□□□□ -0.48
ARHGEF39-201ENST00000378387 NEUROD6Q96NK8 337 aa12.06□□□□□ -0.48
ARHGEF39-201ENST00000378387 SCLT1Q96NL6 688 aa12.06□□□□□ -0.48
ARHGEF39-201ENST00000378387 POLD4Q9HCU8 107 aa12.06□□□□□ -0.48
ARHGEF39-201ENST00000378387 NDUFAB1O14561 156 aa12.06□□□□□ -0.48
ARHGEF39-201ENST00000378387 KRT32Q14532 448 aa12.06□□□□□ -0.48
ARHGEF39-201ENST00000378387 SPECC1Q5M775 1068 aa12.06□□□□□ -0.48
ARHGEF39-201ENST00000378387 LRRC31Q6UY01 552 aa12.06□□□□□ -0.48
ARHGEF39-201ENST00000378387 SRGAP1Q7Z6B7 1085 aa12.06□□□□□ -0.48
ARHGEF39-201ENST00000378387 STX17P56962 302 aa12.05□□□□□ -0.48
ARHGEF39-201ENST00000378387 UGGT1Q9NYU2 1555 aa12.05□□□□□ -0.48
ARHGEF39-201ENST00000378387 KIF24Q5T7B8 1368 aa12.05□□□□□ -0.48
ARHGEF39-201ENST00000378387 NAA25Q14CX7 972 aa12.05□□□□□ -0.48
ARHGEF39-201ENST00000378387 TSR1Q2NL82 804 aaKnown RBP12.05□□□□□ -0.48
ARHGEF39-201ENST00000378387 GUCA1BQ9UMX6 200 aa12.05□□□□□ -0.48
ARHGEF39-201ENST00000378387 PLEKHG2Q9H7P9 1386 aa12.05□□□□□ -0.48
ARHGEF39-201ENST00000378387 GOLGA6CA6NDK9 693 aa12.05□□□□□ -0.48
ARHGEF39-201ENST00000378387 GOLGA6DP0CG33 693 aa12.05□□□□□ -0.48
ARHGEF39-201ENST00000378387 NLRP12P59046 1061 aa12.05□□□□□ -0.48
ARHGEF39-201ENST00000378387 PNOCQ13519 176 aa12.05□□□□□ -0.48
ARHGEF39-201ENST00000378387 MTF1Q14872 753 aa12.05□□□□□ -0.48
ARHGEF39-201ENST00000378387 FAM71BQ8TC56 605 aa12.05□□□□□ -0.48
ARHGEF39-201ENST00000378387 GOLGA6AQ9NYA3 693 aa12.05□□□□□ -0.48
ARHGEF39-201ENST00000378387 FAM169AQ9Y6X4 670 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms