RNA–Protein interactions for RNA: ENST00000377269.3

UBA1-202, Transcript of ubiquitin like modifier activating enzyme 1, humanhuman

TSL 2 BASIC

Gene UBA1, Length 2,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA1-202ENST00000377269 DDR1Q08345 913 aa17.45■□□□□ 0.38
UBA1-202ENST00000377269 TPTE2Q6XPS3 522 aa17.45■□□□□ 0.38
UBA1-202ENST00000377269 ZNF830Q96NB3 372 aaPredicted RBP17.44■□□□□ 0.38
UBA1-202ENST00000377269 NPHP1O15259 732 aa17.44■□□□□ 0.38
UBA1-202ENST00000377269 BRD1O95696 1058 aa17.44■□□□□ 0.38
UBA1-202ENST00000377269 HMGB2P26583 209 aaKnown RBP17.44■□□□□ 0.38
UBA1-202ENST00000377269 HSP90AB4PQ58FF6 505 aa17.44■□□□□ 0.38
UBA1-202ENST00000377269 TTC22Q5TAA0 569 aa17.44■□□□□ 0.38
UBA1-202ENST00000377269 ATG9AQ7Z3C6 839 aa17.44■□□□□ 0.38
UBA1-202ENST00000377269 FEZ1Q99689 392 aa17.44■□□□□ 0.38
UBA1-202ENST00000377269 STK32BQ9NY57 414 aa17.44■□□□□ 0.38
UBA1-202ENST00000377269 CARMIL3Q8ND23 1372 aa17.43■□□□□ 0.38
UBA1-202ENST00000377269 SPDYE4A6NLX3 237 aa17.43■□□□□ 0.38
UBA1-202ENST00000377269 TFCP2Q12800 502 aa17.43■□□□□ 0.38
UBA1-202ENST00000377269 NYXQ9GZU5 481 aa17.43■□□□□ 0.38
UBA1-202ENST00000377269 TTC12Q9H892 705 aaPredicted RBP17.43■□□□□ 0.38
UBA1-202ENST00000377269 DIAPH3Q9NSV4 1193 aa17.43■□□□□ 0.38
UBA1-202ENST00000377269 CTIFO43310 598 aaKnown RBP17.42■□□□□ 0.38
UBA1-202ENST00000377269 SERPINB2P05120 415 aa17.42■□□□□ 0.38
UBA1-202ENST00000377269 RGPD3A6NKT7 1758 aaPredicted RBP17.42■□□□□ 0.38
UBA1-202ENST00000377269 RGPD4Q7Z3J3 1758 aa17.42■□□□□ 0.38
UBA1-202ENST00000377269 TAF7LQ5H9L4 462 aa17.42■□□□□ 0.38
UBA1-202ENST00000377269 PRR5LQ6MZQ0 368 aa17.42■□□□□ 0.38
UBA1-202ENST00000377269 CNBD1Q8NA66 436 aa17.42■□□□□ 0.38
UBA1-202ENST00000377269 EAF2Q96CJ1 260 aaPredicted RBP17.42■□□□□ 0.38
UBA1-202ENST00000377269 ANKRD18BA2A2Z9 1011 aa17.41■□□□□ 0.38
UBA1-202ENST00000377269 EYA2O00167 538 aa17.41■□□□□ 0.38
UBA1-202ENST00000377269 POLRMTO00411 1230 aaKnown RBP17.41■□□□□ 0.38
UBA1-202ENST00000377269 SLC10A5Q5PT55 438 aa17.41■□□□□ 0.38
UBA1-202ENST00000377269 FLAD1Q8NFF5 587 aa17.41■□□□□ 0.38
UBA1-202ENST00000377269 C17orf53Q8N3J3 647 aaPredicted RBP17.41■□□□□ 0.38
UBA1-202ENST00000377269 TUBGCP6Q96RT7 1819 aa17.4■□□□□ 0.38
UBA1-202ENST00000377269 SALL3Q9BXA9 1300 aa17.4■□□□□ 0.38
UBA1-202ENST00000377269 CCDC152Q4G0S7 254 aa17.4■□□□□ 0.38
UBA1-202ENST00000377269 LDHAL6AQ6ZMR3 332 aa17.4■□□□□ 0.38
UBA1-202ENST00000377269 CCDC125Q86Z20 511 aa17.4■□□□□ 0.38
UBA1-202ENST00000377269 ERC1Q8IUD2 1116 aa17.4■□□□□ 0.38
UBA1-202ENST00000377269 CCDC8Q9H0W5 538 aaPredicted RBP17.4■□□□□ 0.38
UBA1-202ENST00000377269 TLR7Q9NYK1 1049 aaKnown RBP17.4■□□□□ 0.38
UBA1-202ENST00000377269 ADCY5O95622 1261 aa17.4■□□□□ 0.38
UBA1-202ENST00000377269 U2AF2P26368 475 aaKnown RBP eCLIP17.4■□□□□ 0.38
UBA1-202ENST00000377269 PDE1AP54750 535 aa17.4■□□□□ 0.38
UBA1-202ENST00000377269 AACSQ86V21 672 aa17.4■□□□□ 0.38
UBA1-202ENST00000377269 CLASRPQ8N2M8 674 aaKnown RBP17.4■□□□□ 0.38
UBA1-202ENST00000377269 NLGN1Q8N2Q7 840 aa17.4■□□□□ 0.38
UBA1-202ENST00000377269 USP25Q9UHP3 1055 aa17.4■□□□□ 0.38
UBA1-202ENST00000377269 MMP10P09238 476 aa17.39■□□□□ 0.37
UBA1-202ENST00000377269 UPF1Q92900 1129 aaKnown RBP eCLIP17.39■□□□□ 0.37
UBA1-202ENST00000377269 OGFRQ9NZT2 677 aa17.39■□□□□ 0.37
UBA1-202ENST00000377269 MX1P20591 662 aa17.39■□□□□ 0.37
UBA1-202ENST00000377269 KIAA1524Q8TCG1 905 aa17.39■□□□□ 0.37
UBA1-202ENST00000377269 NLRP3Q96P20 1036 aa17.39■□□□□ 0.37
UBA1-202ENST00000377269 COL4A1P02462 1669 aa17.38■□□□□ 0.37
UBA1-202ENST00000377269 DDX60Q8IY21 1712 aaKnown RBP17.38■□□□□ 0.37
UBA1-202ENST00000377269 RIOK3O14730 519 aaKnown RBP17.38■□□□□ 0.37
UBA1-202ENST00000377269 SF3B3Q15393 1217 aaKnown RBP17.38■□□□□ 0.37
UBA1-202ENST00000377269 MPNDQ8N594 471 aa17.38■□□□□ 0.37
UBA1-202ENST00000377269 IL15P40933 162 aaPredicted RBP17.38■□□□□ 0.37
UBA1-202ENST00000377269 GABPB1Q06547 395 aaPredicted RBP17.38■□□□□ 0.37
UBA1-202ENST00000377269 CUL4AQ13619 759 aa17.38■□□□□ 0.37
UBA1-202ENST00000377269 RIPOR2Q9Y4F9 1068 aa17.38■□□□□ 0.37
UBA1-202ENST00000377269 COL24A1Q17RW2 1714 aa17.37■□□□□ 0.37
UBA1-202ENST00000377269 REC8O95072 547 aa17.37■□□□□ 0.37
UBA1-202ENST00000377269 HSP90B1P14625 803 aaKnown RBP17.37■□□□□ 0.37
UBA1-202ENST00000377269 TIMM10P62072 90 aa17.37■□□□□ 0.37
UBA1-202ENST00000377269 CHAF1AQ13111 956 aaPredicted RBP17.37■□□□□ 0.37
UBA1-202ENST00000377269 TMX3Q96JJ7 454 aa17.37■□□□□ 0.37
UBA1-202ENST00000377269 CNNM1Q9NRU3 951 aa17.37■□□□□ 0.37
UBA1-202ENST00000377269 NAP1L2Q9ULW6 460 aaPredicted RBP17.37■□□□□ 0.37
UBA1-202ENST00000377269 TNNI3KQ59H18 835 aa17.37■□□□□ 0.37
UBA1-202ENST00000377269 FOXD4L5Q5VV16 416 aaPredicted RBP17.37■□□□□ 0.37
UBA1-202ENST00000377269 CASC1Q6TDU7 716 aa17.37■□□□□ 0.37
UBA1-202ENST00000377269 SLC51AQ86UW1 340 aa17.37■□□□□ 0.37
UBA1-202ENST00000377269 HELBQ8NG08 1087 aaPredicted RBP17.37■□□□□ 0.37
UBA1-202ENST00000377269 FOXD4L4Q8WXT5 416 aaPredicted RBP17.37■□□□□ 0.37
UBA1-202ENST00000377269 CELF1Q92879 486 aaKnown RBP17.37■□□□□ 0.37
UBA1-202ENST00000377269 FPGT-TNNI3KV9GXZ4 949 aa17.37■□□□□ 0.37
UBA1-202ENST00000377269 CIAO1O76071 339 aa17.36■□□□□ 0.37
UBA1-202ENST00000377269 IFIT2P09913 472 aaKnown RBP17.36■□□□□ 0.37
UBA1-202ENST00000377269 MCM2P49736 904 aa17.36■□□□□ 0.37
UBA1-202ENST00000377269 SNAP23O00161 211 aa17.36■□□□□ 0.37
UBA1-202ENST00000377269 SYCP1Q15431 976 aa17.36■□□□□ 0.37
UBA1-202ENST00000377269 KLHL34Q8N239 644 aa17.36■□□□□ 0.37
UBA1-202ENST00000377269 SDSP20132 328 aa17.35■□□□□ 0.37
UBA1-202ENST00000377269 INTS4Q96HW7 963 aaKnown RBP17.35■□□□□ 0.37
UBA1-202ENST00000377269 DBNLQ9UJU6 430 aaKnown RBP17.35■□□□□ 0.37
UBA1-202ENST00000377269 KDM4AO75164 1064 aa17.35■□□□□ 0.37
UBA1-202ENST00000377269 TPM3P06753 285 aa17.35■□□□□ 0.37
UBA1-202ENST00000377269 MPHOSPH8Q99549 860 aa17.35■□□□□ 0.37
UBA1-202ENST00000377269 OSBPL3Q9H4L5 887 aa17.35■□□□□ 0.37
UBA1-202ENST00000377269 CEP126Q9P2H0 1117 aa17.35■□□□□ 0.37
UBA1-202ENST00000377269 MYH3P11055 1940 aa17.34■□□□□ 0.37
UBA1-202ENST00000377269 METTL24Q5JXM2 366 aa17.34■□□□□ 0.37
UBA1-202ENST00000377269 NEUROD6Q96NK8 337 aa17.34■□□□□ 0.37
UBA1-202ENST00000377269 DBNDD2Q9BQY9 259 aa17.34■□□□□ 0.37
UBA1-202ENST00000377269 CGNQ9P2M7 1197 aaKnown RBP17.34■□□□□ 0.37
UBA1-202ENST00000377269 STAP2Q9UGK3 403 aa17.34■□□□□ 0.37
UBA1-202ENST00000377269 IGSF3O75054 1194 aa17.33■□□□□ 0.37
UBA1-202ENST00000377269 GADD45BO75293 160 aaPredicted RBP17.33■□□□□ 0.37
UBA1-202ENST00000377269 MAP4K4O95819 1239 aaPredicted RBP17.33■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms