RNA–Protein interactions for RNA: ENST00000377197.7

C9orf135-201, Transcript of chromosome 9 open reading frame 135, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf135, Length 873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf135-201ENST00000377197 SMC1BQ8NDV3 1235 aa13□□□□□ -0.33
C9orf135-201ENST00000377197 LRCH3Q96II8 777 aa13□□□□□ -0.33
C9orf135-201ENST00000377197 WBP1LQ9NX94 342 aa13□□□□□ -0.33
C9orf135-201ENST00000377197 CDKN2AIPQ9NXV6 580 aaPredicted RBP13□□□□□ -0.33
C9orf135-201ENST00000377197 ZC3H4Q9UPT8 1303 aaKnown RBP12.99□□□□□ -0.33
C9orf135-201ENST00000377197 NFKBIEO00221 500 aa12.99□□□□□ -0.33
C9orf135-201ENST00000377197 LMNB1P20700 586 aa12.99□□□□□ -0.33
C9orf135-201ENST00000377197 CRY2Q49AN0 593 aa12.99□□□□□ -0.33
C9orf135-201ENST00000377197 SOGA3Q5TF21 947 aa12.99□□□□□ -0.33
C9orf135-201ENST00000377197 PLBD2Q8NHP8 589 aa12.99□□□□□ -0.33
C9orf135-201ENST00000377197 UTP14AQ9BVJ6 771 aaKnown RBP12.99□□□□□ -0.33
C9orf135-201ENST00000377197 CHMP4AQ9BY43 222 aa12.99□□□□□ -0.33
C9orf135-201ENST00000377197 RRAGCQ9HB90 399 aa12.99□□□□□ -0.33
C9orf135-201ENST00000377197 SALL2Q9Y467 1007 aaPredicted RBP12.99□□□□□ -0.33
C9orf135-201ENST00000377197 FANCIQ9NVI1 1328 aa12.98□□□□□ -0.33
C9orf135-201ENST00000377197 PRELPP51888 382 aa12.98□□□□□ -0.33
C9orf135-201ENST00000377197 TCIRG1Q13488 830 aa12.98□□□□□ -0.33
C9orf135-201ENST00000377197 CCDC30Q5VVM6 783 aa12.98□□□□□ -0.33
C9orf135-201ENST00000377197 NLRP10Q86W26 655 aa12.98□□□□□ -0.33
C9orf135-201ENST00000377197 TSPYL6Q8N831 410 aa12.98□□□□□ -0.33
C9orf135-201ENST00000377197 RPGRQ92834 1020 aaKnown RBP12.98□□□□□ -0.33
C9orf135-201ENST00000377197 HPS5Q9UPZ3 1129 aa12.98□□□□□ -0.33
C9orf135-201ENST00000377197 ADGRG1Q9Y653 693 aa12.98□□□□□ -0.33
C9orf135-201ENST00000377197 LTBP3Q9NS15 1303 aa12.97□□□□□ -0.33
C9orf135-201ENST00000377197 ALDH1B1P30837 517 aa12.97□□□□□ -0.33
C9orf135-201ENST00000377197 CCDC93Q567U6 631 aa12.97□□□□□ -0.33
C9orf135-201ENST00000377197 WDR63Q8IWG1 891 aa12.97□□□□□ -0.33
C9orf135-201ENST00000377197 TAOK3Q9H2K8 898 aa12.97□□□□□ -0.33
C9orf135-201ENST00000377197 LRRC37AA6NMS7 1700 aa12.96□□□□□ -0.33
C9orf135-201ENST00000377197 SH3TC1Q8TE82 1336 aa12.96□□□□□ -0.33
C9orf135-201ENST00000377197 TWISTNBQ3B726 338 aaPredicted RBP12.96□□□□□ -0.33
C9orf135-201ENST00000377197 RIC3Q7Z5B4 369 aa12.96□□□□□ -0.33
C9orf135-201ENST00000377197 GPIHBP1Q8IV16 184 aa12.96□□□□□ -0.33
C9orf135-201ENST00000377197 PHAXQ9H814 394 aaKnown RBP12.96□□□□□ -0.33
C9orf135-201ENST00000377197 TRMT112Q9UI30 125 aaKnown RBP12.96□□□□□ -0.33
C9orf135-201ENST00000377197 C7orf43Q8WVR3 580 aa12.95□□□□□ -0.34
C9orf135-201ENST00000377197 RBM17Q96I25 401 aaKnown RBP12.95□□□□□ -0.34
C9orf135-201ENST00000377197 NLRP3Q96P20 1036 aa12.95□□□□□ -0.34
C9orf135-201ENST00000377197 ISCA1Q9BUE6 129 aa12.95□□□□□ -0.34
C9orf135-201ENST00000377197 STK31Q9BXU1 1019 aa12.95□□□□□ -0.34
C9orf135-201ENST00000377197 PLA2G2EQ9NZK7 142 aa12.95□□□□□ -0.34
C9orf135-201ENST00000377197 SNED1Q8TER0 1413 aa12.95□□□□□ -0.34
C9orf135-201ENST00000377197 SPEF2Q9C093 1822 aa12.95□□□□□ -0.34
C9orf135-201ENST00000377197 ATP5J2-PTCD1G3V325 749 aa12.94□□□□□ -0.34
C9orf135-201ENST00000377197 DDX58O95786 925 aaKnown RBP12.94□□□□□ -0.34
C9orf135-201ENST00000377197 HSPA1AP0DMV8 641 aaKnown RBP12.94□□□□□ -0.34
C9orf135-201ENST00000377197 HSPA1BP0DMV9 641 aaKnown RBP12.94□□□□□ -0.34
C9orf135-201ENST00000377197 HOXA10P31260 410 aaPredicted RBP12.94□□□□□ -0.34
C9orf135-201ENST00000377197 HIC1Q14526 733 aa12.94□□□□□ -0.34
C9orf135-201ENST00000377197 SLC10A5Q5PT55 438 aa12.94□□□□□ -0.34
C9orf135-201ENST00000377197 SWT1Q5T5J6 900 aaKnown RBP12.94□□□□□ -0.34
C9orf135-201ENST00000377197 DIEXFQ68CQ4 756 aaKnown RBP12.94□□□□□ -0.34
C9orf135-201ENST00000377197 PPEF1O14829 653 aaPredicted RBP12.93□□□□□ -0.34
C9orf135-201ENST00000377197 RNF40O75150 1001 aa12.93□□□□□ -0.34
C9orf135-201ENST00000377197 HCLS1P14317 486 aaPredicted RBP12.93□□□□□ -0.34
C9orf135-201ENST00000377197 FKBP4Q02790 459 aaKnown RBP eCLIP12.93□□□□□ -0.34
C9orf135-201ENST00000377197 ZNF428Q96B54 188 aa12.93□□□□□ -0.34
C9orf135-201ENST00000377197 CRAMP1Q96RY5 1269 aa12.93□□□□□ -0.34
C9orf135-201ENST00000377197 SCN4AP35499 1836 aa12.92□□□□□ -0.34
C9orf135-201ENST00000377197 ABCC4O15439 1325 aa12.92□□□□□ -0.34
C9orf135-201ENST00000377197 TCERG1O14776 1098 aaKnown RBP12.92□□□□□ -0.34
C9orf135-201ENST00000377197 VEGFAP15692 232 aaPredicted RBP12.92□□□□□ -0.34
C9orf135-201ENST00000377197 OLFM4Q6UX06 510 aa12.92□□□□□ -0.34
C9orf135-201ENST00000377197 RTKN2Q8IZC4 609 aa12.92□□□□□ -0.34
C9orf135-201ENST00000377197 SYNE4Q8N205 404 aa12.92□□□□□ -0.34
C9orf135-201ENST00000377197 MYD88Q99836 296 aa12.92□□□□□ -0.34
C9orf135-201ENST00000377197 MYH16Q9H6N6 1097 aa12.92□□□□□ -0.34
C9orf135-201ENST00000377197 TSR3Q9UJK0 312 aaKnown RBP12.92□□□□□ -0.34
C9orf135-201ENST00000377197 ZNF521Q96K83 1311 aa12.91□□□□□ -0.34
C9orf135-201ENST00000377197 CCER2I3L3R5 266 aa12.91□□□□□ -0.34
C9orf135-201ENST00000377197 EXOSC9Q06265 439 aaKnown RBP12.91□□□□□ -0.34
C9orf135-201ENST00000377197 TRIM28Q13263 835 aaKnown RBP12.91□□□□□ -0.34
C9orf135-201ENST00000377197 CC2D2BQ6DHV5 1058 aa12.91□□□□□ -0.34
C9orf135-201ENST00000377197 FAM89AQ96GI7 184 aa12.91□□□□□ -0.34
C9orf135-201ENST00000377197 COL4A1P02462 1669 aa12.9□□□□□ -0.34
C9orf135-201ENST00000377197 GLTPD2A6NH11 291 aa12.9□□□□□ -0.34
C9orf135-201ENST00000377197 KSR2Q6VAB6 950 aa12.9□□□□□ -0.34
C9orf135-201ENST00000377197 METTL22Q9BUU2 404 aaPredicted RBP12.9□□□□□ -0.34
C9orf135-201ENST00000377197 MAP3K2Q9Y2U5 619 aa12.9□□□□□ -0.34
C9orf135-201ENST00000377197 LTBP1Q14766 1721 aa12.9□□□□□ -0.34
C9orf135-201ENST00000377197 PI4KAP2A4QPH2 592 aa12.89□□□□□ -0.35
C9orf135-201ENST00000377197 VAMP4O75379 141 aa12.89□□□□□ -0.35
C9orf135-201ENST00000377197 GRIPAP1Q4V328 841 aa12.89□□□□□ -0.35
C9orf135-201ENST00000377197 RTL5Q5HYW3 569 aaPredicted RBP12.89□□□□□ -0.35
C9orf135-201ENST00000377197 DDX46Q7L014 1031 aaKnown RBP12.89□□□□□ -0.35
C9orf135-201ENST00000377197 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.89□□□□□ -0.35
C9orf135-201ENST00000377197 PI4KAP1Q8N8J0 262 aa12.89□□□□□ -0.35
C9orf135-201ENST00000377197 ZBTB38Q8NAP3 1195 aaPredicted RBP12.89□□□□□ -0.35
C9orf135-201ENST00000377197 CCDC191Q8NCU4 936 aa12.89□□□□□ -0.35
C9orf135-201ENST00000377197 PSMD1Q99460 953 aa12.89□□□□□ -0.35
C9orf135-201ENST00000377197 TMX4Q9H1E5 349 aaPredicted RBP12.89□□□□□ -0.35
C9orf135-201ENST00000377197 ZNF277Q9NRM2 450 aaPredicted RBP12.89□□□□□ -0.35
C9orf135-201ENST00000377197 CWC25Q9NXE8 425 aaPredicted RBP12.89□□□□□ -0.35
C9orf135-201ENST00000377197 RCCD1A6NED2 376 aa12.88□□□□□ -0.35
C9orf135-201ENST00000377197 IRS4O14654 1257 aaPredicted RBP12.88□□□□□ -0.35
C9orf135-201ENST00000377197 IARSP41252 1262 aaKnown RBP12.88□□□□□ -0.35
C9orf135-201ENST00000377197 PPP4CP60510 307 aa12.88□□□□□ -0.35
C9orf135-201ENST00000377197 NEXNQ0ZGT2 675 aa12.88□□□□□ -0.35
C9orf135-201ENST00000377197 FLIIQ13045 1269 aa12.88□□□□□ -0.35
C9orf135-201ENST00000377197 GRAPQ13588 217 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms