RNA–Protein interactions for RNA: ENST00000376839.7

ACTN1-202, Transcript of actinin alpha 1, humanhuman

TSL 2 BASIC

Gene ACTN1, Length 2,824 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-202ENST00000376839 CBX1P83916 185 aa15.52■□□□□ 0.07
ACTN1-202ENST00000376839 ZMYM1Q5SVZ6 1142 aa15.52■□□□□ 0.07
ACTN1-202ENST00000376839 PDCL2Q8N4E4 241 aa15.52■□□□□ 0.07
ACTN1-202ENST00000376839 HELLSQ9NRZ9 838 aa15.52■□□□□ 0.07
ACTN1-202ENST00000376839 MAST3O60307 1309 aa15.51■□□□□ 0.07
ACTN1-202ENST00000376839 NBPF26B4DH59 902 aa15.51■□□□□ 0.07
ACTN1-202ENST00000376839 GOLGA6L19H0YKK7 550 aa15.51■□□□□ 0.07
ACTN1-202ENST00000376839 CHRNA2Q15822 529 aa15.51■□□□□ 0.07
ACTN1-202ENST00000376839 STX1AQ16623 288 aa15.51■□□□□ 0.07
ACTN1-202ENST00000376839 NBPF14Q5TI25 921 aa15.51■□□□□ 0.07
ACTN1-202ENST00000376839 TTLL5Q6EMB2 1281 aa15.51■□□□□ 0.07
ACTN1-202ENST00000376839 NBPF10Q6P3W6 841 aaKnown RBP15.51■□□□□ 0.07
ACTN1-202ENST00000376839 NBPF15Q8N660 670 aa15.51■□□□□ 0.07
ACTN1-202ENST00000376839 ZNF594Q96JF6 807 aaPredicted RBP15.51■□□□□ 0.07
ACTN1-202ENST00000376839 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.51■□□□□ 0.077e-7■■■□□ 15.2
ACTN1-202ENST00000376839 ZNF142P52746 1687 aaPredicted RBP15.51■□□□□ 0.07
ACTN1-202ENST00000376839 GLI3P10071 1580 aa15.51■□□□□ 0.07
ACTN1-202ENST00000376839 H7C1W4 665 aa15.51■□□□□ 0.07
ACTN1-202ENST00000376839 CAVIN2O95810 425 aa15.51■□□□□ 0.07
ACTN1-202ENST00000376839 TNNT1P13805 278 aa15.51■□□□□ 0.07
ACTN1-202ENST00000376839 CDC25BP30305 580 aa15.51■□□□□ 0.07
ACTN1-202ENST00000376839 LRRC24Q50LG9 513 aa15.51■□□□□ 0.07
ACTN1-202ENST00000376839 TTLL7Q6ZT98 887 aa15.51■□□□□ 0.07
ACTN1-202ENST00000376839 ENGASEQ8NFI3 743 aa15.51■□□□□ 0.07
ACTN1-202ENST00000376839 CABLES1Q8TDN4 633 aa15.51■□□□□ 0.07
ACTN1-202ENST00000376839 PDIA3P30101 505 aaKnown RBP15.5■□□□□ 0.07
ACTN1-202ENST00000376839 SARM1Q6SZW1 724 aa15.5■□□□□ 0.07
ACTN1-202ENST00000376839 CCDC73Q6ZRK6 1079 aa15.5■□□□□ 0.07
ACTN1-202ENST00000376839 GPHNQ9NQX3 736 aaPredicted RBP15.5■□□□□ 0.07
ACTN1-202ENST00000376839 CABP4P57796 275 aa15.5■□□□□ 0.07
ACTN1-202ENST00000376839 ALS2Q96Q42 1657 aa15.5■□□□□ 0.07
ACTN1-202ENST00000376839 M0R2C6 588 aa15.49■□□□□ 0.07
ACTN1-202ENST00000376839 CTAGE5O15320 804 aa15.49■□□□□ 0.07
ACTN1-202ENST00000376839 NCBP1Q09161 790 aaKnown RBP15.49■□□□□ 0.07
ACTN1-202ENST00000376839 PROSER2Q86WR7 435 aaPredicted RBP15.49■□□□□ 0.07
ACTN1-202ENST00000376839 DHX40Q8IX18 779 aaKnown RBP15.49■□□□□ 0.07
ACTN1-202ENST00000376839 FSIP1Q8NA03 581 aa15.49■□□□□ 0.07
ACTN1-202ENST00000376839 FBXW7Q969H0 707 aa15.49■□□□□ 0.07
ACTN1-202ENST00000376839 KINO60870 393 aaKnown RBP15.49■□□□□ 0.07
ACTN1-202ENST00000376839 FDPSP14324 419 aaKnown RBP15.49■□□□□ 0.07
ACTN1-202ENST00000376839 ME1P48163 572 aa15.49■□□□□ 0.07
ACTN1-202ENST00000376839 TPD52L1Q16890 204 aaPredicted RBP15.49■□□□□ 0.07
ACTN1-202ENST00000376839 LRRC8AQ8IWT6 810 aa15.49■□□□□ 0.07
ACTN1-202ENST00000376839 CARMIL3Q8ND23 1372 aa15.49■□□□□ 0.07
ACTN1-202ENST00000376839 SPDYE4A6NLX3 237 aa15.49■□□□□ 0.07
ACTN1-202ENST00000376839 USP27XA6NNY8 438 aa15.49■□□□□ 0.07
ACTN1-202ENST00000376839 FAM160A1Q05DH4 1040 aa15.49■□□□□ 0.07
ACTN1-202ENST00000376839 SMTNL1A8MU46 457 aa15.48■□□□□ 0.07
ACTN1-202ENST00000376839 IFIT1P09914 478 aaKnown RBP15.48■□□□□ 0.07
ACTN1-202ENST00000376839 U2AF2P26368 475 aaKnown RBP eCLIP15.48■□□□□ 0.071e-13■■■□□ 15
ACTN1-202ENST00000376839 OTUD7BQ6GQQ9 843 aa15.48■□□□□ 0.07
ACTN1-202ENST00000376839 MRFAP1L1Q96HT8 127 aa15.48■□□□□ 0.07
ACTN1-202ENST00000376839 ZNF396Q96N95 335 aaPredicted RBP15.48■□□□□ 0.07
ACTN1-202ENST00000376839 MST1RQ04912 1400 aa15.48■□□□□ 0.07
ACTN1-202ENST00000376839 KIF1AQ12756 1690 aa15.48■□□□□ 0.07
ACTN1-202ENST00000376839 BECN2A8MW95 431 aa15.48■□□□□ 0.07
ACTN1-202ENST00000376839 RNF113AO15541 343 aaKnown RBP15.48■□□□□ 0.07
ACTN1-202ENST00000376839 IL15P40933 162 aaPredicted RBP15.48■□□□□ 0.07
ACTN1-202ENST00000376839 NAA30Q147X3 362 aaPredicted RBP15.48■□□□□ 0.07
ACTN1-202ENST00000376839 OSBP2Q969R2 916 aa15.48■□□□□ 0.07
ACTN1-202ENST00000376839 PUS3Q9BZE2 481 aaKnown RBP15.48■□□□□ 0.07
ACTN1-202ENST00000376839 CWC25Q9NXE8 425 aaPredicted RBP15.48■□□□□ 0.07
ACTN1-202ENST00000376839 A0A1B0GUL7 405 aa15.47■□□□□ 0.07
ACTN1-202ENST00000376839 ZNF274Q96GC6 653 aaPredicted RBP15.47■□□□□ 0.07
ACTN1-202ENST00000376839 GPR108Q9NPR9 543 aa15.47■□□□□ 0.07
ACTN1-202ENST00000376839 PCDHA7Q9UN72 937 aa15.47■□□□□ 0.07
ACTN1-202ENST00000376839 COL18A1P39060 1754 aa15.47■□□□□ 0.07
ACTN1-202ENST00000376839 EYA2O00167 538 aa15.47■□□□□ 0.07
ACTN1-202ENST00000376839 ZSCAN20P17040 1043 aaPredicted RBP15.47■□□□□ 0.07
ACTN1-202ENST00000376839 FILIP1Q7Z7B0 1213 aa15.47■□□□□ 0.07
ACTN1-202ENST00000376839 ZBTB3Q9H5J0 574 aa15.47■□□□□ 0.07
ACTN1-202ENST00000376839 HAND2P61296 217 aa15.46■□□□□ 0.07
ACTN1-202ENST00000376839 AOPEPQ8N6M6 819 aa15.46■□□□□ 0.07
ACTN1-202ENST00000376839 TJP1Q07157 1748 aa15.46■□□□□ 0.07
ACTN1-202ENST00000376839 A0A1B0GVL5 298 aa15.46■□□□□ 0.07
ACTN1-202ENST00000376839 FOXP2O15409 715 aa15.46■□□□□ 0.07
ACTN1-202ENST00000376839 A1BGP04217 495 aa15.46■□□□□ 0.07
ACTN1-202ENST00000376839 ATL3Q6DD88 541 aa15.46■□□□□ 0.07
ACTN1-202ENST00000376839 FMR1NBQ8N0W7 255 aaPredicted RBP15.46■□□□□ 0.07
ACTN1-202ENST00000376839 BCL11BQ9C0K0 894 aaPredicted RBP15.46■□□□□ 0.07
ACTN1-202ENST00000376839 ANO10Q9NW15 660 aa15.46■□□□□ 0.07
ACTN1-202ENST00000376839 LAMB4A4D0S4 1761 aa15.45■□□□□ 0.06
ACTN1-202ENST00000376839 ZNF592Q92610 1267 aa15.45■□□□□ 0.06
ACTN1-202ENST00000376839 FKBP4Q02790 459 aaKnown RBP eCLIP15.45■□□□□ 0.06
ACTN1-202ENST00000376839 RAB11FIP4Q86YS3 637 aa15.45■□□□□ 0.06
ACTN1-202ENST00000376839 MRPS27Q92552 414 aaKnown RBP15.45■□□□□ 0.06
ACTN1-202ENST00000376839 ABCC6O95255 1503 aa15.44■□□□□ 0.06
ACTN1-202ENST00000376839 CCDC69A6NI79 296 aa15.44■□□□□ 0.06
ACTN1-202ENST00000376839 SKILP12757 684 aa15.44■□□□□ 0.06
ACTN1-202ENST00000376839 NDUFA8P51970 172 aa15.44■□□□□ 0.06
ACTN1-202ENST00000376839 RBM6P78332 1123 aaKnown RBP15.44■□□□□ 0.06
ACTN1-202ENST00000376839 CCZ1BP86790 482 aa15.44■□□□□ 0.06
ACTN1-202ENST00000376839 CCZ1P86791 482 aaPredicted RBP15.44■□□□□ 0.06
ACTN1-202ENST00000376839 HSP90AB3PQ58FF7 597 aa15.44■□□□□ 0.06
ACTN1-202ENST00000376839 CEP135Q66GS9 1140 aa15.44■□□□□ 0.06
ACTN1-202ENST00000376839 CEP57L1Q8IYX8 460 aa15.44■□□□□ 0.06
ACTN1-202ENST00000376839 C19orf44Q9H6X5 657 aa15.44■□□□□ 0.06
ACTN1-202ENST00000376839 GJB4Q9NTQ9 266 aa15.44■□□□□ 0.06
ACTN1-202ENST00000376839 CLIC4Q9Y696 253 aa15.44■□□□□ 0.06
ACTN1-202ENST00000376839 ADORA1P30542 326 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms