RNA–Protein interactions for RNA: ENST00000376656.8

TRIM39-201, Transcript of tripartite motif containing 39, humanhuman

APPRIS P4 TSL 2 BASIC

Gene TRIM39, Length 3,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-201ENST00000376656 NCAPD2Q15021 1401 aa19.24■□□□□ 0.67
TRIM39-201ENST00000376656 PSDA5PKW4 1024 aaPredicted RBP19.23■□□□□ 0.67
TRIM39-201ENST00000376656 SFPQP23246 707 aaKnown RBP eCLIP19.23■□□□□ 0.67
TRIM39-201ENST00000376656 NDUFA8P51970 172 aa19.23■□□□□ 0.67
TRIM39-201ENST00000376656 MCMDC2Q4G0Z9 681 aa19.23■□□□□ 0.67
TRIM39-201ENST00000376656 GORABQ5T7V8 394 aa19.23■□□□□ 0.67
TRIM39-201ENST00000376656 IP6K1Q92551 441 aa19.23■□□□□ 0.67
TRIM39-201ENST00000376656 LTN1O94822 1766 aa19.23■□□□□ 0.67
TRIM39-201ENST00000376656 RNMTO43148 476 aaKnown RBP19.23■□□□□ 0.67
TRIM39-201ENST00000376656 DHX32Q7L7V1 743 aaKnown RBP19.23■□□□□ 0.67
TRIM39-201ENST00000376656 FMNL2Q96PY5 1086 aa19.23■□□□□ 0.67
TRIM39-201ENST00000376656 MRC1P22897 1456 aa19.23■□□□□ 0.67
TRIM39-201ENST00000376656 PNMA6AP0CW24 399 aaPredicted RBP19.23■□□□□ 0.67
TRIM39-201ENST00000376656 DDX46Q7L014 1031 aaKnown RBP19.23■□□□□ 0.67
TRIM39-201ENST00000376656 BIN1O00499 593 aa19.22■□□□□ 0.67
TRIM39-201ENST00000376656 PLA2G4AP47712 749 aa19.22■□□□□ 0.67
TRIM39-201ENST00000376656 TFCP2Q12800 502 aa19.22■□□□□ 0.67
TRIM39-201ENST00000376656 TNNI3KQ59H18 835 aa19.22■□□□□ 0.67
TRIM39-201ENST00000376656 ATL3Q6DD88 541 aa19.22■□□□□ 0.67
TRIM39-201ENST00000376656 KIAA1468Q9P260 1216 aa19.22■□□□□ 0.67
TRIM39-201ENST00000376656 FPGT-TNNI3KV9GXZ4 949 aa19.22■□□□□ 0.67
TRIM39-201ENST00000376656 A0A0G2JLW4 131 aa19.22■□□□□ 0.67
TRIM39-201ENST00000376656 LMO7Q8WWI1 1683 aa19.22■□□□□ 0.67
TRIM39-201ENST00000376656 SALL1Q9NSC2 1324 aa19.22■□□□□ 0.67
TRIM39-201ENST00000376656 RGPD2P0DJD1 1756 aa19.21■□□□□ 0.67
TRIM39-201ENST00000376656 DDX58O95786 925 aaKnown RBP19.21■□□□□ 0.67
TRIM39-201ENST00000376656 CYP2C19P33261 490 aa19.21■□□□□ 0.67
TRIM39-201ENST00000376656 NEDD4P46934 1319 aa19.21■□□□□ 0.67
TRIM39-201ENST00000376656 HEG1Q9ULI3 1381 aa19.21■□□□□ 0.67
TRIM39-201ENST00000376656 ADALQ6DHV7 355 aa19.21■□□□□ 0.67
TRIM39-201ENST00000376656 RIC3Q7Z5B4 369 aa19.21■□□□□ 0.67
TRIM39-201ENST00000376656 HOMER1Q86YM7 354 aa19.21■□□□□ 0.67
TRIM39-201ENST00000376656 DBNDD2Q9BQY9 259 aa19.21■□□□□ 0.67
TRIM39-201ENST00000376656 CALCOCO1Q9P1Z2 691 aa19.21■□□□□ 0.67
TRIM39-201ENST00000376656 PXDNQ92626 1479 aa19.21■□□□□ 0.66
TRIM39-201ENST00000376656 ABCC6O95255 1503 aa19.2■□□□□ 0.66
TRIM39-201ENST00000376656 CHST3Q7LGC8 479 aa19.2■□□□□ 0.66
TRIM39-201ENST00000376656 CCDC9Q9Y3X0 531 aaKnown RBP19.2■□□□□ 0.66
TRIM39-201ENST00000376656 FAM193AP78312 1265 aa19.2■□□□□ 0.66
TRIM39-201ENST00000376656 ZRSR1Q15695 479 aaKnown RBP19.2■□□□□ 0.66
TRIM39-201ENST00000376656 PLEKHO1Q53GL0 409 aaPredicted RBP19.2■□□□□ 0.66
TRIM39-201ENST00000376656 OTUD7BQ6GQQ9 843 aa19.2■□□□□ 0.66
TRIM39-201ENST00000376656 DNAI1Q9UI46 699 aa19.2■□□□□ 0.66
TRIM39-201ENST00000376656 EXOSC10Q01780 885 aaKnown RBP19.2■□□□□ 0.66
TRIM39-201ENST00000376656 PDIA6Q15084 440 aa19.2■□□□□ 0.66
TRIM39-201ENST00000376656 DDX21Q9NR30 783 aaKnown RBP eCLIP19.2■□□□□ 0.66
TRIM39-201ENST00000376656 CLIC4Q9Y696 253 aa19.2■□□□□ 0.66
TRIM39-201ENST00000376656 NEURL1BA8MQ27 555 aa19.19■□□□□ 0.66
TRIM39-201ENST00000376656 HMGB1P09429 215 aaKnown RBP19.19■□□□□ 0.66
TRIM39-201ENST00000376656 BPIFA3Q9BQP9 254 aa19.19■□□□□ 0.66
TRIM39-201ENST00000376656 RTEL1Q9NZ71 1219 aa19.19■□□□□ 0.66
TRIM39-201ENST00000376656 NCAPHQ15003 741 aa19.19■□□□□ 0.66
TRIM39-201ENST00000376656 CARMIL3Q8ND23 1372 aa19.19■□□□□ 0.66
TRIM39-201ENST00000376656 ZRANB2O95218 330 aaKnown RBP eCLIP19.18■□□□□ 0.66
TRIM39-201ENST00000376656 FDPSP14324 419 aaKnown RBP19.18■□□□□ 0.66
TRIM39-201ENST00000376656 PDIA3P30101 505 aaKnown RBP19.18■□□□□ 0.66
TRIM39-201ENST00000376656 KCNJ6P48051 423 aa19.18■□□□□ 0.66
TRIM39-201ENST00000376656 ETF1P62495 437 aaKnown RBP19.18■□□□□ 0.66
TRIM39-201ENST00000376656 CYB5RLQ6IPT4 315 aa19.18■□□□□ 0.66
TRIM39-201ENST00000376656 CREBRFQ8IUR6 639 aa19.18■□□□□ 0.66
TRIM39-201ENST00000376656 LINC00301Q8NCQ3 95 aa19.18■□□□□ 0.66
TRIM39-201ENST00000376656 ORC3Q9UBD5 711 aaPredicted RBP19.18■□□□□ 0.66
TRIM39-201ENST00000376656 USP54Q70EL1 1684 aa19.18■□□□□ 0.66
TRIM39-201ENST00000376656 A0A1W2PQ27 194 aa19.18■□□□□ 0.66
TRIM39-201ENST00000376656 A0A1W2PQ64 194 aa19.18■□□□□ 0.66
TRIM39-201ENST00000376656 A0A1W2PQD8 194 aa19.18■□□□□ 0.66
TRIM39-201ENST00000376656 GCKRQ14397 625 aa19.18■□□□□ 0.66
TRIM39-201ENST00000376656 AGXT2Q9BYV1 514 aa19.18■□□□□ 0.66
TRIM39-201ENST00000376656 FANCGO15287 622 aa19.18■□□□□ 0.66
TRIM39-201ENST00000376656 LMOD1P29536 600 aaPredicted RBP19.18■□□□□ 0.66
TRIM39-201ENST00000376656 PTPN12Q05209 780 aaKnown RBP19.18■□□□□ 0.66
TRIM39-201ENST00000376656 SF3A1Q15459 793 aaKnown RBP19.18■□□□□ 0.66
TRIM39-201ENST00000376656 C1orf141Q5JVX7 400 aa19.18■□□□□ 0.66
TRIM39-201ENST00000376656 HAUS7Q99871 368 aa19.18■□□□□ 0.66
TRIM39-201ENST00000376656 COPRSQ9NQ92 184 aa19.18■□□□□ 0.66
TRIM39-201ENST00000376656 RFX5P48382 616 aaPredicted RBP19.17■□□□□ 0.66
TRIM39-201ENST00000376656 STK38Q15208 465 aa19.17■□□□□ 0.66
TRIM39-201ENST00000376656 ISM2Q6H9L7 571 aa19.17■□□□□ 0.66
TRIM39-201ENST00000376656 UBXN4Q92575 508 aa19.17■□□□□ 0.66
TRIM39-201ENST00000376656 ZKSCAN7Q9P0L1 754 aaPredicted RBP19.17■□□□□ 0.66
TRIM39-201ENST00000376656 RFX7Q2KHR2 1363 aa19.17■□□□□ 0.66
TRIM39-201ENST00000376656 MYL6BP14649 208 aa19.17■□□□□ 0.66
TRIM39-201ENST00000376656 HNRNPH2P55795 449 aaKnown RBP19.17■□□□□ 0.66
TRIM39-201ENST00000376656 MYD88Q99836 296 aa19.17■□□□□ 0.66
TRIM39-201ENST00000376656 VGLL3A8MV65 326 aa19.17■□□□□ 0.66
TRIM39-201ENST00000376656 POLR3DP05423 398 aaPredicted RBP19.17■□□□□ 0.66
TRIM39-201ENST00000376656 SLC3A2P08195 630 aaKnown RBP19.17■□□□□ 0.66
TRIM39-201ENST00000376656 ATP1A3P13637 1013 aa19.17■□□□□ 0.66
TRIM39-201ENST00000376656 PDE4CQ08493 712 aa19.17■□□□□ 0.66
TRIM39-201ENST00000376656 ANKARQ7Z5J8 1434 aa19.17■□□□□ 0.66
TRIM39-201ENST00000376656 NRDCO43847 1150 aa19.16■□□□□ 0.66
TRIM39-201ENST00000376656 NLRP12P59046 1061 aa19.16■□□□□ 0.66
TRIM39-201ENST00000376656 FANCCQ00597 558 aa19.16■□□□□ 0.66
TRIM39-201ENST00000376656 TRIM65Q6PJ69 517 aa19.16■□□□□ 0.66
TRIM39-201ENST00000376656 TMCO3Q6UWJ1 677 aa19.16■□□□□ 0.66
TRIM39-201ENST00000376656 TRERF1Q96PN7 1200 aa19.16■□□□□ 0.66
TRIM39-201ENST00000376656 EID1Q9Y6B2 187 aa19.16■□□□□ 0.66
TRIM39-201ENST00000376656 PHLPP2Q6ZVD8 1323 aa19.16■□□□□ 0.66
TRIM39-201ENST00000376656 E7EWF7 191 aa19.16■□□□□ 0.66
TRIM39-201ENST00000376656 POLR3GO15318 223 aaPredicted RBP19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms