RNA–Protein interactions for RNA: ENST00000376643.6

HDAC6-204, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 907 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-204ENST00000376643 AOC2O75106 756 aa18.78■□□□□ 0.6
HDAC6-204ENST00000376643 REM2Q8IYK8 340 aaPredicted RBP18.78■□□□□ 0.6
HDAC6-204ENST00000376643 MYOZ2Q9NPC6 264 aa18.78■□□□□ 0.6
HDAC6-204ENST00000376643 CACNA1FO60840 1977 aa18.78■□□□□ 0.6
HDAC6-204ENST00000376643 EGFRP00533 1210 aa18.77■□□□□ 0.6
HDAC6-204ENST00000376643 ITGA6P23229 1130 aa18.77■□□□□ 0.6
HDAC6-204ENST00000376643 KCNJ4P48050 445 aa18.77■□□□□ 0.6
HDAC6-204ENST00000376643 STRIP1Q5VSL9 837 aa18.77■□□□□ 0.6
HDAC6-204ENST00000376643 G2E3Q7L622 706 aa18.77■□□□□ 0.6
HDAC6-204ENST00000376643 ANKRD18BA2A2Z9 1011 aa18.76■□□□□ 0.59
HDAC6-204ENST00000376643 ADM5C9JUS6 153 aa18.76■□□□□ 0.59
HDAC6-204ENST00000376643 VAMP4O75379 141 aa18.76■□□□□ 0.59
HDAC6-204ENST00000376643 SCARF1Q14162 830 aa18.76■□□□□ 0.59
HDAC6-204ENST00000376643 GMLQ99445 158 aa18.76■□□□□ 0.59
HDAC6-204ENST00000376643 HDAC9Q9UKV0 1011 aa18.76■□□□□ 0.59
HDAC6-204ENST00000376643 ZNF804BA4D1E1 1349 aa18.75■□□□□ 0.59
HDAC6-204ENST00000376643 PSME4Q14997 1843 aa18.75■□□□□ 0.59
HDAC6-204ENST00000376643 CSF1RP07333 972 aa18.75■□□□□ 0.59
HDAC6-204ENST00000376643 ZNF157P51786 506 aaPredicted RBP18.75■□□□□ 0.59
HDAC6-204ENST00000376643 ANGEL2Q5VTE6 544 aaKnown RBP18.75■□□□□ 0.59
HDAC6-204ENST00000376643 CDCA5Q96FF9 252 aa18.75■□□□□ 0.59
HDAC6-204ENST00000376643 ABHD8Q96I13 439 aa18.75■□□□□ 0.59
HDAC6-204ENST00000376643 SAGE1Q9NXZ1 904 aa18.75■□□□□ 0.59
HDAC6-204ENST00000376643 SCN9AQ15858 1988 aa18.75■□□□□ 0.59
HDAC6-204ENST00000376643 NF2P35240 595 aa18.74■□□□□ 0.59
HDAC6-204ENST00000376643 IFIT5Q13325 482 aaKnown RBP18.74■□□□□ 0.59
HDAC6-204ENST00000376643 FAM161AQ3B820 660 aa18.74■□□□□ 0.59
HDAC6-204ENST00000376643 EXOSC9Q06265 439 aaKnown RBP18.73■□□□□ 0.59
HDAC6-204ENST00000376643 FBXW7Q969H0 707 aa18.73■□□□□ 0.59
HDAC6-204ENST00000376643 CASP7P55210 303 aa18.72■□□□□ 0.59
HDAC6-204ENST00000376643 DACT2Q5SW24 774 aa18.72■□□□□ 0.59
HDAC6-204ENST00000376643 SALL2Q9Y467 1007 aaPredicted RBP18.72■□□□□ 0.59
HDAC6-204ENST00000376643 SLC10A3P09131 477 aa18.71■□□□□ 0.59
HDAC6-204ENST00000376643 TTLL5Q6EMB2 1281 aa18.71■□□□□ 0.59
HDAC6-204ENST00000376643 CHRNDQ07001 517 aa18.7■□□□□ 0.58
HDAC6-204ENST00000376643 CCDC57Q2TAC2 916 aa18.7■□□□□ 0.58
HDAC6-204ENST00000376643 TAF7LQ5H9L4 462 aa18.7■□□□□ 0.58
HDAC6-204ENST00000376643 APOBEC3FQ8IUX4 373 aaKnown RBP18.7■□□□□ 0.58
HDAC6-204ENST00000376643 CHMP3Q9Y3E7 222 aa18.7■□□□□ 0.58
HDAC6-204ENST00000376643 PAPPA2Q9BXP8 1791 aa18.7■□□□□ 0.58
HDAC6-204ENST00000376643 FAM155AB1AL88 458 aaPredicted RBP18.69■□□□□ 0.58
HDAC6-204ENST00000376643 ALDH1L1O75891 902 aa18.69■□□□□ 0.58
HDAC6-204ENST00000376643 BEND3Q5T5X7 828 aa18.69■□□□□ 0.58
HDAC6-204ENST00000376643 C15orf52Q6ZUT6 534 aaKnown RBP18.69■□□□□ 0.58
HDAC6-204ENST00000376643 ZNF804AQ7Z570 1209 aa18.69■□□□□ 0.58
HDAC6-204ENST00000376643 TSKSQ9UJT2 592 aa18.69■□□□□ 0.58
HDAC6-204ENST00000376643 GRM8O00222 908 aa18.68■□□□□ 0.58
HDAC6-204ENST00000376643 KIF23Q02241 960 aaPredicted RBP18.68■□□□□ 0.58
HDAC6-204ENST00000376643 C9orf78Q9NZ63 289 aaPredicted RBP18.68■□□□□ 0.58
HDAC6-204ENST00000376643 SPEF2Q9C093 1822 aa18.67■□□□□ 0.58
HDAC6-204ENST00000376643 WNT10BO00744 389 aa18.67■□□□□ 0.58
HDAC6-204ENST00000376643 FAM9BQ8IZU0 186 aa18.67■□□□□ 0.58
HDAC6-204ENST00000376643 CD209Q9NNX6 404 aa18.67■□□□□ 0.58
HDAC6-204ENST00000376643 ASTN2O75129 1339 aaPredicted RBP18.67■□□□□ 0.58
HDAC6-204ENST00000376643 POLR2AP24928 1970 aaKnown RBP18.66■□□□□ 0.58
HDAC6-204ENST00000376643 COL1A1P02452 1464 aaPredicted RBP18.66■□□□□ 0.58
HDAC6-204ENST00000376643 MYO1BO43795 1136 aa18.66■□□□□ 0.58
HDAC6-204ENST00000376643 GTF2IP78347 998 aa18.66■□□□□ 0.58
HDAC6-204ENST00000376643 TTLL12Q14166 644 aaPredicted RBP18.66■□□□□ 0.58
HDAC6-204ENST00000376643 DLK2Q6UY11 383 aa18.66■□□□□ 0.58
HDAC6-204ENST00000376643 SRCIN1Q9C0H9 1055 aa18.66■□□□□ 0.58
HDAC6-204ENST00000376643 F6X3S4 739 aa18.65■□□□□ 0.58
HDAC6-204ENST00000376643 FKBP1AP62942 108 aaKnown RBP18.65■□□□□ 0.58
HDAC6-204ENST00000376643 FOXO4P98177 505 aa18.65■□□□□ 0.58
HDAC6-204ENST00000376643 NBPF9Q3BBW0 867 aa18.65■□□□□ 0.58
HDAC6-204ENST00000376643 LDHAL6AQ6ZMR3 332 aa18.65■□□□□ 0.58
HDAC6-204ENST00000376643 ARMC9Q7Z3E5 817 aa18.65■□□□□ 0.58
HDAC6-204ENST00000376643 TXNRD3Q86VQ6 643 aa18.65■□□□□ 0.58
HDAC6-204ENST00000376643 RASAL3Q86YV0 1011 aa18.65■□□□□ 0.58
HDAC6-204ENST00000376643 KIAA0825Q8IV33 1275 aa18.65■□□□□ 0.58
HDAC6-204ENST00000376643 CNNM1Q9NRU3 951 aa18.65■□□□□ 0.58
HDAC6-204ENST00000376643 CCDC85CA6NKD9 419 aa18.64■□□□□ 0.57
HDAC6-204ENST00000376643 DGKZQ13574 1117 aa18.64■□□□□ 0.57
HDAC6-204ENST00000376643 DLGAP5Q15398 846 aa18.64■□□□□ 0.57
HDAC6-204ENST00000376643 LMBR1LQ6UX01 489 aa18.64■□□□□ 0.57
HDAC6-204ENST00000376643 PPP2R3BQ9Y5P8 575 aa18.64■□□□□ 0.57
HDAC6-204ENST00000376643 WTIPA6NIX2 430 aaPredicted RBP18.63■□□□□ 0.57
HDAC6-204ENST00000376643 SLC4A10Q6U841 1118 aa18.63■□□□□ 0.57
HDAC6-204ENST00000376643 ZIC5Q96T25 663 aa18.63■□□□□ 0.57
HDAC6-204ENST00000376643 MCOLN1Q9GZU1 580 aa18.63■□□□□ 0.57
HDAC6-204ENST00000376643 RNF186Q9NXI6 227 aa18.63■□□□□ 0.57
HDAC6-204ENST00000376643 TRPA1O75762 1119 aa18.62■□□□□ 0.57
HDAC6-204ENST00000376643 IL1R1P14778 569 aa18.62■□□□□ 0.57
HDAC6-204ENST00000376643 MTMR14Q8NCE2 650 aa18.62■□□□□ 0.57
HDAC6-204ENST00000376643 CSRNP1Q96S65 589 aa18.62■□□□□ 0.57
HDAC6-204ENST00000376643 MXD3Q9BW11 206 aa18.62■□□□□ 0.57
HDAC6-204ENST00000376643 PTPRCP08575 1304 aa18.61■□□□□ 0.57
HDAC6-204ENST00000376643 SASH1O94885 1247 aa18.61■□□□□ 0.57
HDAC6-204ENST00000376643 KLRK1P26718 216 aa18.61■□□□□ 0.57
HDAC6-204ENST00000376643 SREBF2Q12772 1141 aa18.61■□□□□ 0.57
HDAC6-204ENST00000376643 UBE4AQ14139 1066 aa18.61■□□□□ 0.57
HDAC6-204ENST00000376643 UNCXA6NJT0 531 aa18.6■□□□□ 0.57
HDAC6-204ENST00000376643 TAF5LO75529 589 aa18.6■□□□□ 0.57
HDAC6-204ENST00000376643 SPINK5Q9NQ38 1064 aaPredicted RBP18.6■□□□□ 0.57
HDAC6-204ENST00000376643 AKAP11Q9UKA4 1901 aa18.59■□□□□ 0.57
HDAC6-204ENST00000376643 MROH5Q6ZUA9 1318 aa18.59■□□□□ 0.57
HDAC6-204ENST00000376643 E9PSI1 815 aa18.59■□□□□ 0.57
HDAC6-204ENST00000376643 HELBQ8NG08 1087 aaPredicted RBP18.59■□□□□ 0.57
HDAC6-204ENST00000376643 ZBED3Q96IU2 234 aaPredicted RBP18.59■□□□□ 0.57
HDAC6-204ENST00000376643 IRS2Q9Y4H2 1338 aa18.58■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms