RNA–Protein interactions for RNA: ENST00000376570.8

DDR1-227, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDR1, Length 3,820 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-227ENST00000376570 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.66□□□□□ -0.22
DDR1-227ENST00000376570 MTMR6Q9Y217 621 aa13.66□□□□□ -0.22
DDR1-227ENST00000376570 V9GYY5 206 aaPredicted RBP13.66□□□□□ -0.22
DDR1-227ENST00000376570 PCDH11XQ9BZA7 1347 aa13.66□□□□□ -0.22
DDR1-227ENST00000376570 PCDH11YQ9BZA8 1340 aa13.66□□□□□ -0.22
DDR1-227ENST00000376570 ADD1P35611 737 aaKnown RBP13.66□□□□□ -0.22
DDR1-227ENST00000376570 ZNF165P49910 485 aa13.66□□□□□ -0.22
DDR1-227ENST00000376570 BCAMP50895 628 aa13.66□□□□□ -0.22
DDR1-227ENST00000376570 KRT32Q14532 448 aa13.66□□□□□ -0.22
DDR1-227ENST00000376570 RNF113AO15541 343 aaKnown RBP13.66□□□□□ -0.22
DDR1-227ENST00000376570 GPAA1O43292 621 aa13.66□□□□□ -0.22
DDR1-227ENST00000376570 KCNQ2O43526 872 aa13.66□□□□□ -0.22
DDR1-227ENST00000376570 PDIA6Q15084 440 aa13.66□□□□□ -0.22
DDR1-227ENST00000376570 PDCL3Q9H2J4 239 aa13.66□□□□□ -0.22
DDR1-227ENST00000376570 ADGRL3Q9HAR2 1447 aa13.66□□□□□ -0.22
DDR1-227ENST00000376570 ANKIB1Q9P2G1 1089 aa13.66□□□□□ -0.22
DDR1-227ENST00000376570 KIAA1210Q9ULL0 1709 aa13.66□□□□□ -0.22
DDR1-227ENST00000376570 MBD4O95243 580 aa13.65□□□□□ -0.22
DDR1-227ENST00000376570 VAT1LQ9HCJ6 419 aa13.65□□□□□ -0.22
DDR1-227ENST00000376570 TPD52L1Q16890 204 aaPredicted RBP13.65□□□□□ -0.22
DDR1-227ENST00000376570 HOMER1Q86YM7 354 aa13.65□□□□□ -0.22
DDR1-227ENST00000376570 KBTBD3Q8NAB2 608 aa13.65□□□□□ -0.22
DDR1-227ENST00000376570 OSBP2Q969R2 916 aa13.65□□□□□ -0.22
DDR1-227ENST00000376570 AKAP2Q9Y2D5 859 aa13.65□□□□□ -0.22
DDR1-227ENST00000376570 GOLGA8AA7E2F4 631 aa13.65□□□□□ -0.22
DDR1-227ENST00000376570 GOLGA6L6A8MZA4 724 aa13.65□□□□□ -0.22
DDR1-227ENST00000376570 M0R2C6 588 aa13.65□□□□□ -0.22
DDR1-227ENST00000376570 CYP7A1P22680 504 aa13.65□□□□□ -0.22
DDR1-227ENST00000376570 GYG1P46976 350 aa13.65□□□□□ -0.22
DDR1-227ENST00000376570 SDR42E1Q8WUS8 393 aa13.65□□□□□ -0.22
DDR1-227ENST00000376570 UBAC1Q9BSL1 405 aa13.65□□□□□ -0.22
DDR1-227ENST00000376570 PXDNQ92626 1479 aa13.65□□□□□ -0.22
DDR1-227ENST00000376570 GPR101Q96P66 508 aaPredicted RBP13.64□□□□□ -0.23
DDR1-227ENST00000376570 PUS7LQ9H0K6 701 aaKnown RBP13.64□□□□□ -0.23
DDR1-227ENST00000376570 SLC4A4Q9Y6R1 1079 aa13.64□□□□□ -0.23
DDR1-227ENST00000376570 RGS12O14924 1447 aa13.64□□□□□ -0.23
DDR1-227ENST00000376570 PRKAB2O43741 272 aa13.64□□□□□ -0.23
DDR1-227ENST00000376570 PTGS1P23219 599 aa13.64□□□□□ -0.23
DDR1-227ENST00000376570 CCDC186Q7Z3E2 898 aa13.64□□□□□ -0.23
DDR1-227ENST00000376570 PPP1R1BQ9UD71 204 aaPredicted RBP13.64□□□□□ -0.23
DDR1-227ENST00000376570 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.64□□□□□ -0.231e-7■■■□□ 14.9
DDR1-227ENST00000376570 UBAP1LF5GYI3 381 aa13.64□□□□□ -0.23
DDR1-227ENST00000376570 NR1I2O75469 434 aa13.64□□□□□ -0.23
DDR1-227ENST00000376570 HOXB7P09629 217 aa13.64□□□□□ -0.23
DDR1-227ENST00000376570 HSPD1P10809 573 aaKnown RBP13.64□□□□□ -0.23
DDR1-227ENST00000376570 VIRMAQ69YN4 1812 aaKnown RBP13.63□□□□□ -0.23
DDR1-227ENST00000376570 E7EWF7 191 aa13.63□□□□□ -0.23
DDR1-227ENST00000376570 TRMT1LQ7Z2T5 733 aaKnown RBP13.63□□□□□ -0.23
DDR1-227ENST00000376570 CYP2D7A0A087X1C5 515 aa13.63□□□□□ -0.23
DDR1-227ENST00000376570 DHX32Q7L7V1 743 aaKnown RBP13.63□□□□□ -0.23
DDR1-227ENST00000376570 STAMQ92783 540 aa13.63□□□□□ -0.23
DDR1-227ENST00000376570 METAP2P50579 478 aaKnown RBP eCLIP13.63□□□□□ -0.236e-6■■■■□ 24.8
DDR1-227ENST00000376570 TCIRG1Q13488 830 aa13.63□□□□□ -0.23
DDR1-227ENST00000376570 SAFBQ15424 915 aaKnown RBP eCLIP13.63□□□□□ -0.23
DDR1-227ENST00000376570 RICTORQ6R327 1708 aa13.62□□□□□ -0.23
DDR1-227ENST00000376570 COBLO75128 1261 aa13.62□□□□□ -0.23
DDR1-227ENST00000376570 FGAP02671 866 aa13.62□□□□□ -0.23
DDR1-227ENST00000376570 SCRN1Q12765 414 aa13.62□□□□□ -0.23
DDR1-227ENST00000376570 PLIN2Q99541 437 aa13.62□□□□□ -0.23
DDR1-227ENST00000376570 KCNJ14Q9UNX9 436 aa13.62□□□□□ -0.23
DDR1-227ENST00000376570 FAM170AA1A519 330 aa13.62□□□□□ -0.23
DDR1-227ENST00000376570 WTIPA6NIX2 430 aaPredicted RBP13.62□□□□□ -0.23
DDR1-227ENST00000376570 TYRO3Q06418 890 aa13.62□□□□□ -0.23
DDR1-227ENST00000376570 CPLX3Q8WVH0 158 aa13.62□□□□□ -0.23
DDR1-227ENST00000376570 MAP4K1Q92918 833 aa13.62□□□□□ -0.23
DDR1-227ENST00000376570 CTNNA3Q9UI47 895 aa13.62□□□□□ -0.23
DDR1-227ENST00000376570 SLC12A7Q9Y666 1083 aa13.62□□□□□ -0.23
DDR1-227ENST00000376570 ZNF532Q9HCE3 1301 aa13.62□□□□□ -0.23
DDR1-227ENST00000376570 MAP3K12Q12852 859 aa13.62□□□□□ -0.23
DDR1-227ENST00000376570 ALG1Q9BT22 464 aa13.62□□□□□ -0.23
DDR1-227ENST00000376570 MARCH6O60337 910 aa13.61□□□□□ -0.23
DDR1-227ENST00000376570 ATP5JP18859 108 aa13.61□□□□□ -0.23
DDR1-227ENST00000376570 LMOD1P29536 600 aaPredicted RBP13.61□□□□□ -0.23
DDR1-227ENST00000376570 LRMPQ12912 555 aa13.61□□□□□ -0.23
DDR1-227ENST00000376570 OFD1O75665 1012 aa13.61□□□□□ -0.23
DDR1-227ENST00000376570 SCAND2PQ9GZW5 306 aaPredicted RBP13.61□□□□□ -0.23
DDR1-227ENST00000376570 ZSWIM6Q9HCJ5 1215 aa13.61□□□□□ -0.23
DDR1-227ENST00000376570 SERPINC1P01008 464 aa13.61□□□□□ -0.23
DDR1-227ENST00000376570 SLC5A1P13866 664 aa13.61□□□□□ -0.23
DDR1-227ENST00000376570 NBPF5PQ86XG9 351 aaPredicted RBP13.61□□□□□ -0.23
DDR1-227ENST00000376570 NCOA7Q8NI08 942 aa13.61□□□□□ -0.23
DDR1-227ENST00000376570 INTS4Q96HW7 963 aaKnown RBP13.61□□□□□ -0.23
DDR1-227ENST00000376570 ZNF396Q96N95 335 aaPredicted RBP13.61□□□□□ -0.23
DDR1-227ENST00000376570 USP28Q96RU2 1077 aa13.61□□□□□ -0.23
DDR1-227ENST00000376570 CFAP45Q9UL16 551 aa13.61□□□□□ -0.23
DDR1-227ENST00000376570 ZPR1O75312 459 aa13.6□□□□□ -0.23
DDR1-227ENST00000376570 NECTIN1Q15223 517 aa13.6□□□□□ -0.23
DDR1-227ENST00000376570 CCDC191Q8NCU4 936 aa13.6□□□□□ -0.23
DDR1-227ENST00000376570 DIP2AQ14689 1571 aa13.6□□□□□ -0.23
DDR1-227ENST00000376570 UBE2Q2LH0YL09 131 aa13.6□□□□□ -0.23
DDR1-227ENST00000376570 MCM5P33992 734 aa13.6□□□□□ -0.23
DDR1-227ENST00000376570 ZNF771Q7L3S4 317 aaPredicted RBP13.6□□□□□ -0.23
DDR1-227ENST00000376570 AOPEPQ8N6M6 819 aa13.6□□□□□ -0.23
DDR1-227ENST00000376570 DNAJC5Q9H3Z4 198 aa13.6□□□□□ -0.23
DDR1-227ENST00000376570 NRBP1Q9UHY1 535 aa13.6□□□□□ -0.23
DDR1-227ENST00000376570 NRKQ7Z2Y5 1582 aa13.6□□□□□ -0.23
DDR1-227ENST00000376570 MAST3O60307 1309 aa13.6□□□□□ -0.23
DDR1-227ENST00000376570 GNPATO15228 680 aa13.6□□□□□ -0.23
DDR1-227ENST00000376570 AFMP43652 599 aa13.6□□□□□ -0.23
DDR1-227ENST00000376570 STOX1Q6ZVD7 989 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms