RNA–Protein interactions for RNA: ENST00000376387.4

TM9SF2-201, Transcript of transmembrane 9 superfamily member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF2, Length 3,430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF2-201ENST00000376387 USPL1Q5W0Q7 1092 aa13.42□□□□□ -0.26
TM9SF2-201ENST00000376387 NSUN7Q8NE18 718 aaKnown RBP13.42□□□□□ -0.26
TM9SF2-201ENST00000376387 MARF1Q9Y4F3 1742 aaKnown RBP13.42□□□□□ -0.26
TM9SF2-201ENST00000376387 A0A1B0GVL5 298 aa13.41□□□□□ -0.26
TM9SF2-201ENST00000376387 KINO60870 393 aaKnown RBP13.41□□□□□ -0.26
TM9SF2-201ENST00000376387 H2AFXP16104 143 aaPredicted RBP13.41□□□□□ -0.26
TM9SF2-201ENST00000376387 ME1P48163 572 aa13.41□□□□□ -0.26
TM9SF2-201ENST00000376387 PSEN1P49768 467 aa13.41□□□□□ -0.26
TM9SF2-201ENST00000376387 DPCR1Q3MIW9 517 aa13.41□□□□□ -0.26
TM9SF2-201ENST00000376387 EPHA10Q5JZY3 1008 aa13.41□□□□□ -0.26
TM9SF2-201ENST00000376387 KSR2Q6VAB6 950 aa13.41□□□□□ -0.26
TM9SF2-201ENST00000376387 SMARCC2Q8TAQ2 1214 aa13.41□□□□□ -0.26
TM9SF2-201ENST00000376387 XPO4Q9C0E2 1151 aaKnown RBP13.41□□□□□ -0.26
TM9SF2-201ENST00000376387 HMG20BQ9P0W2 317 aa13.41□□□□□ -0.26
TM9SF2-201ENST00000376387 GRM8O00222 908 aa13.41□□□□□ -0.26
TM9SF2-201ENST00000376387 HDGFP51858 240 aaKnown RBP13.41□□□□□ -0.26
TM9SF2-201ENST00000376387 CCDC73Q6ZRK6 1079 aa13.41□□□□□ -0.26
TM9SF2-201ENST00000376387 TMC6Q7Z403 805 aa13.41□□□□□ -0.26
TM9SF2-201ENST00000376387 ANO10Q9NW15 660 aa13.41□□□□□ -0.26
TM9SF2-201ENST00000376387 DBF4Q9UBU7 674 aaPredicted RBP13.41□□□□□ -0.26
TM9SF2-201ENST00000376387 PTPN21Q16825 1174 aa13.41□□□□□ -0.26
TM9SF2-201ENST00000376387 ABTB2Q8N961 1025 aa13.41□□□□□ -0.26
TM9SF2-201ENST00000376387 FMNL2Q96PY5 1086 aa13.41□□□□□ -0.26
TM9SF2-201ENST00000376387 ZNF609O15014 1411 aa13.4□□□□□ -0.26
TM9SF2-201ENST00000376387 PTPDC1A2A3K4 754 aa13.4□□□□□ -0.26
TM9SF2-201ENST00000376387 BIN1O00499 593 aa13.4□□□□□ -0.26
TM9SF2-201ENST00000376387 ALDH1L1O75891 902 aa13.4□□□□□ -0.26
TM9SF2-201ENST00000376387 FAM160A1Q05DH4 1040 aa13.4□□□□□ -0.26
TM9SF2-201ENST00000376387 CHST3Q7LGC8 479 aa13.4□□□□□ -0.26
TM9SF2-201ENST00000376387 IFNKQ9P0W0 207 aa13.4□□□□□ -0.26
TM9SF2-201ENST00000376387 AMOTL2Q9Y2J4 779 aa13.4□□□□□ -0.26
TM9SF2-201ENST00000376387 FANCGO15287 622 aa13.4□□□□□ -0.26
TM9SF2-201ENST00000376387 CTAGE5O15320 804 aa13.4□□□□□ -0.26
TM9SF2-201ENST00000376387 SMC2O95347 1197 aa13.4□□□□□ -0.26
TM9SF2-201ENST00000376387 TEFQ10587 303 aa13.4□□□□□ -0.26
TM9SF2-201ENST00000376387 CCDC93Q567U6 631 aa13.4□□□□□ -0.26
TM9SF2-201ENST00000376387 L2HGDHQ9H9P8 463 aa13.4□□□□□ -0.26
TM9SF2-201ENST00000376387 PLA2G4AP47712 749 aa13.39□□□□□ -0.27
TM9SF2-201ENST00000376387 CEP57L1Q8IYX8 460 aa13.39□□□□□ -0.27
TM9SF2-201ENST00000376387 LRRC59Q96AG4 307 aaKnown RBP13.39□□□□□ -0.27
TM9SF2-201ENST00000376387 EPC1Q9H2F5 836 aa13.39□□□□□ -0.27
TM9SF2-201ENST00000376387 DBNLQ9UJU6 430 aaKnown RBP13.39□□□□□ -0.27
TM9SF2-201ENST00000376387 PCDHA7Q9UN72 937 aa13.39□□□□□ -0.27
TM9SF2-201ENST00000376387 MED1Q15648 1581 aaPredicted RBP13.39□□□□□ -0.27
TM9SF2-201ENST00000376387 LAMA4Q16363 1823 aa13.39□□□□□ -0.27
TM9SF2-201ENST00000376387 NDUFA8P51970 172 aa13.39□□□□□ -0.27
TM9SF2-201ENST00000376387 OTUD7BQ6GQQ9 843 aa13.39□□□□□ -0.27
TM9SF2-201ENST00000376387 ISM2Q6H9L7 571 aa13.39□□□□□ -0.27
TM9SF2-201ENST00000376387 NOL10Q9BSC4 688 aaKnown RBP13.39□□□□□ -0.27
TM9SF2-201ENST00000376387 OSBPL5Q9H0X9 879 aaPredicted RBP13.39□□□□□ -0.27
TM9SF2-201ENST00000376387 HOXB7P09629 217 aa13.39□□□□□ -0.27
TM9SF2-201ENST00000376387 ARHGAP29Q52LW3 1261 aa13.39□□□□□ -0.27
TM9SF2-201ENST00000376387 FMR1NBQ8N0W7 255 aaPredicted RBP13.39□□□□□ -0.27
TM9SF2-201ENST00000376387 PIK3R5Q8WYR1 880 aa13.39□□□□□ -0.27
TM9SF2-201ENST00000376387 KCND1Q9NSA2 647 aa13.39□□□□□ -0.27
TM9SF2-201ENST00000376387 RAD21O60216 631 aa13.38□□□□□ -0.27
TM9SF2-201ENST00000376387 IGKV5-2P06315 115 aa13.38□□□□□ -0.27
TM9SF2-201ENST00000376387 GOLGA8FQ08AF8 430 aa13.38□□□□□ -0.27
TM9SF2-201ENST00000376387 GOLGA8DPQ0D2H9 430 aa13.38□□□□□ -0.27
TM9SF2-201ENST00000376387 DDX46Q7L014 1031 aaKnown RBP13.38□□□□□ -0.27
TM9SF2-201ENST00000376387 TIGD1Q96MW7 591 aa13.38□□□□□ -0.27
TM9SF2-201ENST00000376387 PFKFB2O60825 505 aa13.38□□□□□ -0.27
TM9SF2-201ENST00000376387 PNMA6AP0CW24 399 aaPredicted RBP13.38□□□□□ -0.27
TM9SF2-201ENST00000376387 CAPN2P17655 700 aa13.38□□□□□ -0.27
TM9SF2-201ENST00000376387 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.38□□□□□ -0.27
TM9SF2-201ENST00000376387 CCDC66A2RUB6 948 aa13.38□□□□□ -0.27
TM9SF2-201ENST00000376387 KRT32Q14532 448 aa13.38□□□□□ -0.27
TM9SF2-201ENST00000376387 SDF4Q9BRK5 362 aa13.38□□□□□ -0.27
TM9SF2-201ENST00000376387 RGPD2P0DJD1 1756 aa13.38□□□□□ -0.27
TM9SF2-201ENST00000376387 SLIT1O75093 1534 aa13.37□□□□□ -0.27
TM9SF2-201ENST00000376387 NEDD4P46934 1319 aa13.37□□□□□ -0.27
TM9SF2-201ENST00000376387 SEC31AO94979 1220 aaKnown RBP13.37□□□□□ -0.27
TM9SF2-201ENST00000376387 NAA16Q6N069 864 aaPredicted RBP13.37□□□□□ -0.27
TM9SF2-201ENST00000376387 ZNF530Q6P9A1 599 aaPredicted RBP13.37□□□□□ -0.27
TM9SF2-201ENST00000376387 ARHGAP23Q9P227 1491 aa13.37□□□□□ -0.27
TM9SF2-201ENST00000376387 CEBPAP49715 358 aaPredicted RBP13.37□□□□□ -0.27
TM9SF2-201ENST00000376387 GSDMDP57764 484 aa13.37□□□□□ -0.27
TM9SF2-201ENST00000376387 TFCP2Q12800 502 aa13.37□□□□□ -0.27
TM9SF2-201ENST00000376387 BMS1Q14692 1282 aaKnown RBP13.37□□□□□ -0.27
TM9SF2-201ENST00000376387 LINS1Q8NG48 757 aa13.37□□□□□ -0.27
TM9SF2-201ENST00000376387 MTMR7Q9Y216 660 aa13.37□□□□□ -0.27
TM9SF2-201ENST00000376387 CLIC4Q9Y696 253 aa13.37□□□□□ -0.27
TM9SF2-201ENST00000376387 POLR3GO15318 223 aaPredicted RBP13.36□□□□□ -0.27
TM9SF2-201ENST00000376387 CYP2C19P33261 490 aa13.36□□□□□ -0.27
TM9SF2-201ENST00000376387 HNRNPH2P55795 449 aaKnown RBP13.36□□□□□ -0.27
TM9SF2-201ENST00000376387 GPHNQ9NQX3 736 aaPredicted RBP13.36□□□□□ -0.27
TM9SF2-201ENST00000376387 GJB4Q9NTQ9 266 aa13.36□□□□□ -0.27
TM9SF2-201ENST00000376387 DNAI1Q9UI46 699 aa13.36□□□□□ -0.27
TM9SF2-201ENST00000376387 DIP2AQ14689 1571 aa13.36□□□□□ -0.27
TM9SF2-201ENST00000376387 ATP1A3P13637 1013 aa13.36□□□□□ -0.27
TM9SF2-201ENST00000376387 DBNDD2Q9BQY9 259 aa13.36□□□□□ -0.27
TM9SF2-201ENST00000376387 PLEKHG1Q9ULL1 1385 aa13.36□□□□□ -0.27
TM9SF2-201ENST00000376387 SFPQP23246 707 aaKnown RBP eCLIP13.35□□□□□ -0.27
TM9SF2-201ENST00000376387 LMOD1P29536 600 aaPredicted RBP13.35□□□□□ -0.27
TM9SF2-201ENST00000376387 ARMCX6Q7L4S7 300 aa13.35□□□□□ -0.27
TM9SF2-201ENST00000376387 MRPS27Q92552 414 aaKnown RBP13.35□□□□□ -0.27
TM9SF2-201ENST00000376387 KIAA1468Q9P260 1216 aa13.35□□□□□ -0.27
TM9SF2-201ENST00000376387 PXDNQ92626 1479 aa13.35□□□□□ -0.27
TM9SF2-201ENST00000376387 UTYO14607 1347 aa13.35□□□□□ -0.27
TM9SF2-201ENST00000376387 POLR3DP05423 398 aaPredicted RBP13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms