RNA–Protein interactions for RNA: ENST00000373779.7

PTPRU-202, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-202ENST00000373779 RTN1Q16799 776 aa19.98■□□□□ 0.79
PTPRU-202ENST00000373779 SLC9C2Q5TAH2 1124 aa19.98■□□□□ 0.79
PTPRU-202ENST00000373779 CTAGE1Q96RT6 745 aa19.98■□□□□ 0.79
PTPRU-202ENST00000373779 LGR6Q9HBX8 967 aa19.98■□□□□ 0.79
PTPRU-202ENST00000373779 ATP7BP35670 1465 aa19.97■□□□□ 0.79
PTPRU-202ENST00000373779 USP5P45974 858 aa19.97■□□□□ 0.79
PTPRU-202ENST00000373779 BICDL1Q6ZP65 573 aa19.97■□□□□ 0.79
PTPRU-202ENST00000373779 MKNK2Q9HBH9 465 aa19.97■□□□□ 0.79
PTPRU-202ENST00000373779 ZNF652Q9Y2D9 606 aa19.97■□□□□ 0.79
PTPRU-202ENST00000373779 USO1O60763 962 aaKnown RBP19.97■□□□□ 0.79
PTPRU-202ENST00000373779 SUCLG2Q96I99 432 aa19.97■□□□□ 0.79
PTPRU-202ENST00000373779 PTCH1Q13635 1447 aa19.97■□□□□ 0.79
PTPRU-202ENST00000373779 LMAN1P49257 510 aa19.97■□□□□ 0.79
PTPRU-202ENST00000373779 SYCP1Q15431 976 aa19.97■□□□□ 0.79
PTPRU-202ENST00000373779 KLHDC4Q8TBB5 520 aa19.97■□□□□ 0.79
PTPRU-202ENST00000373779 TIGD1Q96MW7 591 aa19.97■□□□□ 0.79
PTPRU-202ENST00000373779 SEC63Q9UGP8 760 aaKnown RBP19.97■□□□□ 0.79
PTPRU-202ENST00000373779 AFMP43652 599 aa19.96■□□□□ 0.79
PTPRU-202ENST00000373779 ERO1AQ96HE7 468 aa19.96■□□□□ 0.79
PTPRU-202ENST00000373779 STAP2Q9UGK3 403 aa19.96■□□□□ 0.79
PTPRU-202ENST00000373779 ZFYVE16Q7Z3T8 1539 aa19.96■□□□□ 0.79
PTPRU-202ENST00000373779 PLEKHG3A1L390 1219 aa19.96■□□□□ 0.79
PTPRU-202ENST00000373779 TMTC2Q8N394 836 aa19.96■□□□□ 0.79
PTPRU-202ENST00000373779 ZNF287Q9HBT7 754 aa19.96■□□□□ 0.79
PTPRU-202ENST00000373779 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP19.96■□□□□ 0.79
PTPRU-202ENST00000373779 MADDQ8WXG6 1647 aa19.96■□□□□ 0.79
PTPRU-202ENST00000373779 SHTN1A0MZ66 631 aa19.95■□□□□ 0.78
PTPRU-202ENST00000373779 BMP15O95972 392 aa19.95■□□□□ 0.78
PTPRU-202ENST00000373779 ODF2Q5BJF6 829 aa19.95■□□□□ 0.78
PTPRU-202ENST00000373779 CACNA2D4Q7Z3S7 1137 aa19.95■□□□□ 0.78
PTPRU-202ENST00000373779 EIF4A1P60842 406 aaKnown RBP19.95■□□□□ 0.78
PTPRU-202ENST00000373779 PHF23Q9BUL5 403 aaPredicted RBP19.95■□□□□ 0.78
PTPRU-202ENST00000373779 METTL22Q9BUU2 404 aaPredicted RBP19.95■□□□□ 0.78
PTPRU-202ENST00000373779 GCP02774 474 aa19.95■□□□□ 0.78
PTPRU-202ENST00000373779 DBNDD2Q9BQY9 259 aa19.95■□□□□ 0.78
PTPRU-202ENST00000373779 MTMR6Q9Y217 621 aa19.95■□□□□ 0.78
PTPRU-202ENST00000373779 TSG101Q99816 390 aa19.94■□□□□ 0.78
PTPRU-202ENST00000373779 USP8P40818 1118 aa19.94■□□□□ 0.78
PTPRU-202ENST00000373779 MTIF2P46199 727 aaKnown RBP19.94■□□□□ 0.78
PTPRU-202ENST00000373779 CCDC175P0C221 793 aa19.94■□□□□ 0.78
PTPRU-202ENST00000373779 PTH1RQ03431 593 aa19.94■□□□□ 0.78
PTPRU-202ENST00000373779 FGFR1OPO95684 399 aaKnown RBP19.94■□□□□ 0.78
PTPRU-202ENST00000373779 ELP1O95163 1332 aa19.94■□□□□ 0.78
PTPRU-202ENST00000373779 TBX22Q9Y458 520 aa19.94■□□□□ 0.78
PTPRU-202ENST00000373779 MYL5Q02045 173 aa19.93■□□□□ 0.78
PTPRU-202ENST00000373779 RRAGBQ5VZM2 374 aa19.93■□□□□ 0.78
PTPRU-202ENST00000373779 RMND1Q9NWS8 449 aa19.93■□□□□ 0.78
PTPRU-202ENST00000373779 CFAP74Q9C0B2 1584 aa19.93■□□□□ 0.78
PTPRU-202ENST00000373779 PAFAH1B1P43034 410 aa19.93■□□□□ 0.78
PTPRU-202ENST00000373779 SMARCC1Q92922 1105 aaPredicted RBP19.93■□□□□ 0.78
PTPRU-202ENST00000373779 JAK2O60674 1132 aa19.93■□□□□ 0.78
PTPRU-202ENST00000373779 KIF5BP33176 963 aa19.93■□□□□ 0.78
PTPRU-202ENST00000373779 ZFYVE27Q5T4F4 411 aa19.93■□□□□ 0.78
PTPRU-202ENST00000373779 DZIP1Q86YF9 867 aaKnown RBP19.93■□□□□ 0.78
PTPRU-202ENST00000373779 GOLGA1Q92805 767 aa19.93■□□□□ 0.78
PTPRU-202ENST00000373779 ZSWIM6Q9HCJ5 1215 aa19.93■□□□□ 0.78
PTPRU-202ENST00000373779 LAMC1P11047 1609 aa19.93■□□□□ 0.78
PTPRU-202ENST00000373779 CUL4AQ13619 759 aa19.92■□□□□ 0.78
PTPRU-202ENST00000373779 SIRT1Q96EB6 747 aa19.92■□□□□ 0.78
PTPRU-202ENST00000373779 NCOA5Q9HCD5 579 aaKnown RBP19.92■□□□□ 0.78
PTPRU-202ENST00000373779 PODXL2Q9NZ53 605 aa19.92■□□□□ 0.78
PTPRU-202ENST00000373779 IGSF3O75054 1194 aa19.92■□□□□ 0.78
PTPRU-202ENST00000373779 U2AF2P26368 475 aaKnown RBP eCLIP19.92■□□□□ 0.781e-6■■■□□ 16.3
PTPRU-202ENST00000373779 ZCRB1Q8TBF4 217 aaKnown RBP19.92■□□□□ 0.78
PTPRU-202ENST00000373779 SLC4A4Q9Y6R1 1079 aa19.92■□□□□ 0.78
PTPRU-202ENST00000373779 NAA16Q6N069 864 aaPredicted RBP19.92■□□□□ 0.78
PTPRU-202ENST00000373779 CTAGE15A4D2H0 777 aa19.92■□□□□ 0.78
PTPRU-202ENST00000373779 CTAGE8P0CG41 777 aa19.92■□□□□ 0.78
PTPRU-202ENST00000373779 KCNA6P17658 529 aa19.92■□□□□ 0.78
PTPRU-202ENST00000373779 SPAG1Q07617 926 aa19.92■□□□□ 0.78
PTPRU-202ENST00000373779 CTAGE6Q86UF2 777 aa19.92■□□□□ 0.78
PTPRU-202ENST00000373779 CTAGE4Q8IX94 777 aa19.92■□□□□ 0.78
PTPRU-202ENST00000373779 ZNF790Q6PG37 636 aa19.92■□□□□ 0.78
PTPRU-202ENST00000373779 EHBP1Q8NDI1 1231 aa19.92■□□□□ 0.78
PTPRU-202ENST00000373779 UBA7P41226 1012 aa19.91■□□□□ 0.78
PTPRU-202ENST00000373779 MAPK8IP2Q13387 824 aaPredicted RBP19.91■□□□□ 0.78
PTPRU-202ENST00000373779 CCDC191Q8NCU4 936 aa19.91■□□□□ 0.78
PTPRU-202ENST00000373779 DCAF5Q96JK2 942 aa19.91■□□□□ 0.78
PTPRU-202ENST00000373779 ZCCHC11Q5TAX3 1644 aaKnown RBP19.91■□□□□ 0.78
PTPRU-202ENST00000373779 FAM114A1Q8IWE2 563 aa19.91■□□□□ 0.78
PTPRU-202ENST00000373779 ESR2Q92731 530 aa19.91■□□□□ 0.78
PTPRU-202ENST00000373779 UTP14AQ9BVJ6 771 aaKnown RBP19.91■□□□□ 0.78
PTPRU-202ENST00000373779 LSG1Q9H089 658 aaKnown RBP19.91■□□□□ 0.78
PTPRU-202ENST00000373779 NEO1Q92859 1461 aa19.91■□□□□ 0.78
PTPRU-202ENST00000373779 ZNF444Q8N0Y2 327 aaPredicted RBP19.91■□□□□ 0.78
PTPRU-202ENST00000373779 CEP112Q8N8E3 955 aa19.91■□□□□ 0.78
PTPRU-202ENST00000373779 IL17REQ8NFR9 667 aa19.91■□□□□ 0.78
PTPRU-202ENST00000373779 DHX58Q96C10 678 aa19.91■□□□□ 0.78
PTPRU-202ENST00000373779 TCP11L1Q9NUJ3 509 aa19.91■□□□□ 0.78
PTPRU-202ENST00000373779 LIG1P18858 919 aa19.91■□□□□ 0.78
PTPRU-202ENST00000373779 CTR9Q6PD62 1173 aa19.91■□□□□ 0.78
PTPRU-202ENST00000373779 ALS2CR12Q96Q35 445 aa19.91■□□□□ 0.78
PTPRU-202ENST00000373779 SPHKAPQ2M3C7 1700 aa19.9■□□□□ 0.78
PTPRU-202ENST00000373779 UNC5CLQ8IV45 518 aa19.9■□□□□ 0.78
PTPRU-202ENST00000373779 RAB34Q9BZG1 259 aa19.9■□□□□ 0.78
PTPRU-202ENST00000373779 BCL2L12Q9HB09 334 aa19.9■□□□□ 0.78
PTPRU-202ENST00000373779 TIMM10P62072 90 aa19.9■□□□□ 0.78
PTPRU-202ENST00000373779 KBTBD3Q8NAB2 608 aa19.9■□□□□ 0.78
PTPRU-202ENST00000373779 GTF3C6Q969F1 213 aa19.9■□□□□ 0.78
PTPRU-202ENST00000373779 TRIM47Q96LD4 638 aa19.9■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms