RNA–Protein interactions for RNA: ENST00000373474.8

LMX1B-202, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,797 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-202ENST00000373474 DNAI1Q9UI46 699 aa16.19■□□□□ 0.18
LMX1B-202ENST00000373474 SPTLC2O15270 562 aa16.19■□□□□ 0.18
LMX1B-202ENST00000373474 PRC1O43663 620 aa16.19■□□□□ 0.18
LMX1B-202ENST00000373474 LDHCP07864 332 aa16.19■□□□□ 0.18
LMX1B-202ENST00000373474 RPGRQ92834 1020 aaKnown RBP16.19■□□□□ 0.18
LMX1B-202ENST00000373474 BAG3O95817 575 aa16.18■□□□□ 0.18
LMX1B-202ENST00000373474 RNF113AO15541 343 aaKnown RBP16.18■□□□□ 0.18
LMX1B-202ENST00000373474 AFMP43652 599 aa16.18■□□□□ 0.18
LMX1B-202ENST00000373474 CCDC155Q8N6L0 562 aa16.18■□□□□ 0.18
LMX1B-202ENST00000373474 SLC4A4Q9Y6R1 1079 aa16.18■□□□□ 0.18
LMX1B-202ENST00000373474 ATP2B3Q16720 1220 aa16.18■□□□□ 0.18
LMX1B-202ENST00000373474 CCDC152Q4G0S7 254 aa16.18■□□□□ 0.18
LMX1B-202ENST00000373474 EXOC5O00471 708 aa16.18■□□□□ 0.18
LMX1B-202ENST00000373474 SLU7O95391 586 aaKnown RBP16.18■□□□□ 0.18
LMX1B-202ENST00000373474 IFIT1BQ5T764 474 aaKnown RBP16.18■□□□□ 0.18
LMX1B-202ENST00000373474 LMBR1LQ6UX01 489 aa16.18■□□□□ 0.18
LMX1B-202ENST00000373474 LINS1Q8NG48 757 aa16.18■□□□□ 0.18
LMX1B-202ENST00000373474 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.18■□□□□ 0.18
LMX1B-202ENST00000373474 SPAG1Q07617 926 aa16.17■□□□□ 0.18
LMX1B-202ENST00000373474 CPSF2Q9P2I0 782 aaKnown RBP16.17■□□□□ 0.18
LMX1B-202ENST00000373474 DNAJC5BQ9UF47 199 aa16.17■□□□□ 0.18
LMX1B-202ENST00000373474 MARCKSP29966 332 aaPredicted RBP16.17■□□□□ 0.18
LMX1B-202ENST00000373474 STAT6P42226 847 aa16.17■□□□□ 0.18
LMX1B-202ENST00000373474 ANKS4BQ8N8V4 417 aa16.17■□□□□ 0.18
LMX1B-202ENST00000373474 ESR2Q92731 530 aa16.17■□□□□ 0.18
LMX1B-202ENST00000373474 ZSWIM4Q9H7M6 989 aa16.17■□□□□ 0.18
LMX1B-202ENST00000373474 MICALL1Q8N3F8 863 aa16.17■□□□□ 0.18
LMX1B-202ENST00000373474 CTAGE15A4D2H0 777 aa16.17■□□□□ 0.18
LMX1B-202ENST00000373474 CTAGE8P0CG41 777 aa16.17■□□□□ 0.18
LMX1B-202ENST00000373474 SETSIPP0DME0 302 aa16.17■□□□□ 0.18
LMX1B-202ENST00000373474 IDEP14735 1019 aa16.17■□□□□ 0.18
LMX1B-202ENST00000373474 CYLC1P35663 651 aaPredicted RBP16.17■□□□□ 0.18
LMX1B-202ENST00000373474 CTAGE6Q86UF2 777 aa16.17■□□□□ 0.18
LMX1B-202ENST00000373474 CTAGE4Q8IX94 777 aa16.17■□□□□ 0.18
LMX1B-202ENST00000373474 CEP83Q9Y592 693 aa16.17■□□□□ 0.18
LMX1B-202ENST00000373474 PTGS1P23219 599 aa16.17■□□□□ 0.18
LMX1B-202ENST00000373474 TMCO5BA8MYB1 307 aa16.16■□□□□ 0.18
LMX1B-202ENST00000373474 CLGNO14967 610 aa16.16■□□□□ 0.18
LMX1B-202ENST00000373474 GSTO1P78417 241 aa16.16■□□□□ 0.18
LMX1B-202ENST00000373474 IFI16Q16666 785 aaKnown RBP16.16■□□□□ 0.18
LMX1B-202ENST00000373474 KRT24Q2M2I5 525 aa16.16■□□□□ 0.18
LMX1B-202ENST00000373474 STMN4Q9H169 189 aaPredicted RBP16.16■□□□□ 0.18
LMX1B-202ENST00000373474 ABCC10Q5T3U5 1492 aa16.16■□□□□ 0.18
LMX1B-202ENST00000373474 SMAP1Q8IYB5 467 aaPredicted RBP16.16■□□□□ 0.18
LMX1B-202ENST00000373474 NBPF7P0C2Y1 421 aaPredicted RBP16.16■□□□□ 0.18
LMX1B-202ENST00000373474 FERP16591 822 aa16.16■□□□□ 0.18
LMX1B-202ENST00000373474 APOBRQ0VD83 1088 aa16.16■□□□□ 0.18
LMX1B-202ENST00000373474 RSRC1Q96IZ7 334 aaKnown RBP16.16■□□□□ 0.18
LMX1B-202ENST00000373474 AOX1Q06278 1338 aa16.16■□□□□ 0.18
LMX1B-202ENST00000373474 NPHP3Q7Z494 1330 aa16.16■□□□□ 0.18
LMX1B-202ENST00000373474 LIG1P18858 919 aa16.16■□□□□ 0.18
LMX1B-202ENST00000373474 CCDC121Q6ZUS5 278 aa16.16■□□□□ 0.18
LMX1B-202ENST00000373474 PTPDC1A2A3K4 754 aa16.15■□□□□ 0.18
LMX1B-202ENST00000373474 BRAPQ7Z569 592 aa16.15■□□□□ 0.18
LMX1B-202ENST00000373474 CETN1Q12798 172 aa16.15■□□□□ 0.18
LMX1B-202ENST00000373474 ATL3Q6DD88 541 aa16.15■□□□□ 0.18
LMX1B-202ENST00000373474 HOMER2Q9NSB8 354 aa16.15■□□□□ 0.18
LMX1B-202ENST00000373474 STXBP4Q6ZWJ1 553 aa16.15■□□□□ 0.18
LMX1B-202ENST00000373474 VAT1LQ9HCJ6 419 aa16.15■□□□□ 0.18
LMX1B-202ENST00000373474 EBAG9O00559 213 aa16.15■□□□□ 0.18
LMX1B-202ENST00000373474 CYP7A1P22680 504 aa16.15■□□□□ 0.18
LMX1B-202ENST00000373474 SLC39A6Q13433 755 aa16.15■□□□□ 0.18
LMX1B-202ENST00000373474 PPP4R3AQ6IN85 833 aa16.15■□□□□ 0.18
LMX1B-202ENST00000373474 DDX23Q9BUQ8 820 aaKnown RBP16.15■□□□□ 0.18
LMX1B-202ENST00000373474 RTL9Q8NET4 1388 aa16.15■□□□□ 0.18
LMX1B-202ENST00000373474 DHX32Q7L7V1 743 aaKnown RBP16.15■□□□□ 0.18
LMX1B-202ENST00000373474 RASSF4Q9H2L5 321 aa16.15■□□□□ 0.18
LMX1B-202ENST00000373474 YTHDC2Q9H6S0 1430 aaKnown RBP16.14■□□□□ 0.18
LMX1B-202ENST00000373474 TFCP2Q12800 502 aa16.14■□□□□ 0.17
LMX1B-202ENST00000373474 RBSNQ9H1K0 784 aa16.14■□□□□ 0.17
LMX1B-202ENST00000373474 TRPM2O94759 1503 aa16.14■□□□□ 0.17
LMX1B-202ENST00000373474 KDM5AP29375 1690 aaKnown RBP16.14■□□□□ 0.17
LMX1B-202ENST00000373474 GBP6Q6ZN66 633 aa16.14■□□□□ 0.17
LMX1B-202ENST00000373474 GOLGA1Q92805 767 aa16.14■□□□□ 0.17
LMX1B-202ENST00000373474 NOP2P46087 812 aaKnown RBP16.14■□□□□ 0.17
LMX1B-202ENST00000373474 SLC9C2Q5TAH2 1124 aa16.14■□□□□ 0.17
LMX1B-202ENST00000373474 CTNNBL1Q8WYA6 563 aaPredicted RBP16.14■□□□□ 0.17
LMX1B-202ENST00000373474 TTC14Q96N46 770 aa16.14■□□□□ 0.17
LMX1B-202ENST00000373474 TCERG1LQ5VWI1 586 aa16.13■□□□□ 0.17
LMX1B-202ENST00000373474 ZCRB1Q8TBF4 217 aaKnown RBP16.13■□□□□ 0.17
LMX1B-202ENST00000373474 CCDC97Q96F63 343 aaPredicted RBP16.13■□□□□ 0.17
LMX1B-202ENST00000373474 NAP1L3Q99457 506 aaPredicted RBP16.13■□□□□ 0.17
LMX1B-202ENST00000373474 CTAGE9A4FU28 777 aa16.13■□□□□ 0.17
LMX1B-202ENST00000373474 A0A1B0GUL7 405 aa16.13■□□□□ 0.17
LMX1B-202ENST00000373474 GNAT2P19087 354 aa16.13■□□□□ 0.17
LMX1B-202ENST00000373474 CWF19L2Q2TBE0 894 aaKnown RBP16.13■□□□□ 0.17
LMX1B-202ENST00000373474 HSP90AA4PQ58FG1 418 aa16.13■□□□□ 0.17
LMX1B-202ENST00000373474 AEBP2Q6ZN18 517 aaPredicted RBP16.13■□□□□ 0.17
LMX1B-202ENST00000373474 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.13■□□□□ 0.17
LMX1B-202ENST00000373474 NBPF11Q86T75 865 aa16.13■□□□□ 0.17
LMX1B-202ENST00000373474 OTUD6BQ8N6M0 293 aa16.13■□□□□ 0.17
LMX1B-202ENST00000373474 HELLSQ9NRZ9 838 aa16.13■□□□□ 0.17
LMX1B-202ENST00000373474 PBRM1Q86U86 1689 aa16.13■□□□□ 0.17
LMX1B-202ENST00000373474 BICC1Q9H694 974 aaKnown RBP16.13■□□□□ 0.17
LMX1B-202ENST00000373474 A0A1B0GUA9 196 aa16.12■□□□□ 0.17
LMX1B-202ENST00000373474 NOL3O60936 208 aaKnown RBP16.12■□□□□ 0.17
LMX1B-202ENST00000373474 CAPN2P17655 700 aa16.12■□□□□ 0.17
LMX1B-202ENST00000373474 RPS6KB1P23443 525 aa16.12■□□□□ 0.17
LMX1B-202ENST00000373474 AKR1B10O60218 316 aa16.12■□□□□ 0.17
LMX1B-202ENST00000373474 TSPY3P0CV98 308 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms