RNA–Protein interactions for RNA: ENST00000373264.4

CDK9-201, Transcript of cyclin dependent kinase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK9, Length 2,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-201ENST00000373264 TNKS1BP1Q9C0C2 1729 aaKnown RBP28.15■■■□□ 2.1
CDK9-201ENST00000373264 H3BQV1 296 aa28.14■■■□□ 2.1
CDK9-201ENST00000373264 CSF1RP07333 972 aa28.14■■■□□ 2.1
CDK9-201ENST00000373264 IFFO2Q5TF58 517 aa28.14■■■□□ 2.1
CDK9-201ENST00000373264 FAM184AQ8NB25 1140 aa28.14■■■□□ 2.1
CDK9-201ENST00000373264 KDM4FA0A1W2PPD8 638 aa28.14■■■□□ 2.09
CDK9-201ENST00000373264 OFD1O75665 1012 aa28.14■■■□□ 2.09
CDK9-201ENST00000373264 STARD3NLO95772 234 aa28.14■■■□□ 2.09
CDK9-201ENST00000373264 GUCY1B3Q02153 619 aa28.14■■■□□ 2.09
CDK9-201ENST00000373264 TRIM28Q13263 835 aaKnown RBP28.14■■■□□ 2.09
CDK9-201ENST00000373264 GIGYF2Q6Y7W6 1299 aaKnown RBP28.14■■■□□ 2.09
CDK9-201ENST00000373264 NLRP10Q86W26 655 aa28.14■■■□□ 2.09
CDK9-201ENST00000373264 ITGB4P16144 1822 aa28.14■■■□□ 2.09
CDK9-201ENST00000373264 ITGA6P23229 1130 aa28.13■■■□□ 2.09
CDK9-201ENST00000373264 RAB11FIP4Q86YS3 637 aa28.13■■■□□ 2.09
CDK9-201ENST00000373264 SMARCC2Q8TAQ2 1214 aa28.13■■■□□ 2.09
CDK9-201ENST00000373264 TBC1D2BQ9UPU7 963 aa28.13■■■□□ 2.09
CDK9-201ENST00000373264 RIC1Q4ADV7 1423 aa28.13■■■□□ 2.09
CDK9-201ENST00000373264 PTPDC1A2A3K4 754 aa28.13■■■□□ 2.09
CDK9-201ENST00000373264 ZNF500O60304 480 aaPredicted RBP28.13■■■□□ 2.09
CDK9-201ENST00000373264 TTLL11Q8NHH1 800 aa28.13■■■□□ 2.09
CDK9-201ENST00000373264 ELP1O95163 1332 aa28.13■■■□□ 2.09
CDK9-201ENST00000373264 NR1I2O75469 434 aa28.11■■■□□ 2.09
CDK9-201ENST00000373264 CYP19A1P11511 503 aaPredicted RBP28.11■■■□□ 2.09
CDK9-201ENST00000373264 METTL24Q5JXM2 366 aa28.11■■■□□ 2.09
CDK9-201ENST00000373264 LDHAL6AQ6ZMR3 332 aa28.11■■■□□ 2.09
CDK9-201ENST00000373264 NWD2Q9ULI1 1742 aa28.11■■■□□ 2.09
CDK9-201ENST00000373264 MCAMP43121 646 aa28.11■■■□□ 2.09
CDK9-201ENST00000373264 UVSSAQ2YD98 709 aa28.11■■■□□ 2.09
CDK9-201ENST00000373264 SCAND2PQ9GZW5 306 aaPredicted RBP28.11■■■□□ 2.09
CDK9-201ENST00000373264 NUP62CLQ9H1M0 184 aa28.11■■■□□ 2.09
CDK9-201ENST00000373264 RIPOR2Q9Y4F9 1068 aa28.11■■■□□ 2.09
CDK9-201ENST00000373264 PDIA3P30101 505 aaKnown RBP28.1■■■□□ 2.09
CDK9-201ENST00000373264 NKX2-3Q8TAU0 364 aa28.1■■■□□ 2.09
CDK9-201ENST00000373264 DENND2AQ9ULE3 1009 aa28.1■■■□□ 2.09
CDK9-201ENST00000373264 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP28.1■■■□□ 2.09
CDK9-201ENST00000373264 GOLGA6L4A6NEF3 574 aa28.1■■■□□ 2.09
CDK9-201ENST00000373264 KDM4AO75164 1064 aa28.1■■■□□ 2.09
CDK9-201ENST00000373264 FGAP02671 866 aa28.1■■■□□ 2.09
CDK9-201ENST00000373264 HMGB1P09429 215 aaKnown RBP28.1■■■□□ 2.09
CDK9-201ENST00000373264 ATP2B3Q16720 1220 aa28.1■■■□□ 2.09
CDK9-201ENST00000373264 VSIG10Q8N0Z9 540 aa28.1■■■□□ 2.09
CDK9-201ENST00000373264 DNAJC5Q9H3Z4 198 aa28.1■■■□□ 2.09
CDK9-201ENST00000373264 TTC12Q9H892 705 aaPredicted RBP28.1■■■□□ 2.09
CDK9-201ENST00000373264 AKAP2Q9Y2D5 859 aa28.1■■■□□ 2.09
CDK9-201ENST00000373264 PLA2G12BQ9BX93 195 aa28.09■■■□□ 2.09
CDK9-201ENST00000373264 AGXT2Q9BYV1 514 aa28.09■■■□□ 2.09
CDK9-201ENST00000373264 C17orf53Q8N3J3 647 aaPredicted RBP28.09■■■□□ 2.09
CDK9-201ENST00000373264 A0A0G2JS52 829 aa28.08■■■□□ 2.09
CDK9-201ENST00000373264 ADD1P35611 737 aaKnown RBP28.08■■■□□ 2.09
CDK9-201ENST00000373264 HELBQ8NG08 1087 aaPredicted RBP28.08■■■□□ 2.09
CDK9-201ENST00000373264 TEX13AQ9BXU3 409 aaPredicted RBP28.08■■■□□ 2.09
CDK9-201ENST00000373264 MRVI1Q9Y6F6 885 aa28.08■■■□□ 2.09
CDK9-201ENST00000373264 SNAP23O00161 211 aa28.08■■■□□ 2.09
CDK9-201ENST00000373264 PPIL4Q8WUA2 492 aaKnown RBP eCLIP28.08■■■□□ 2.09
CDK9-201ENST00000373264 TRMT112Q9UI30 125 aaKnown RBP28.08■■■□□ 2.09
CDK9-201ENST00000373264 R3HCC1Q9Y3T6 440 aaKnown RBP28.08■■■□□ 2.09
CDK9-201ENST00000373264 IRS4O14654 1257 aaPredicted RBP28.07■■■□□ 2.08
CDK9-201ENST00000373264 MAP3K11Q16584 847 aa28.07■■■□□ 2.08
CDK9-201ENST00000373264 BICD2Q8TD16 824 aa28.07■■■□□ 2.08
CDK9-201ENST00000373264 FAM177BA6PVY3 158 aa28.07■■■□□ 2.08
CDK9-201ENST00000373264 CTSWP56202 376 aa28.07■■■□□ 2.08
CDK9-201ENST00000373264 OTUD7BQ6GQQ9 843 aa28.07■■■□□ 2.08
CDK9-201ENST00000373264 TNMDQ9H2S6 317 aa28.07■■■□□ 2.08
CDK9-201ENST00000373264 CNNM1Q9NRU3 951 aa28.07■■■□□ 2.08
CDK9-201ENST00000373264 BCL9O00512 1426 aa28.06■■■□□ 2.08
CDK9-201ENST00000373264 TYRO3Q06418 890 aa28.06■■■□□ 2.08
CDK9-201ENST00000373264 UBN2Q6ZU65 1347 aa28.06■■■□□ 2.08
CDK9-201ENST00000373264 NHSL1Q5SYE7 1610 aa28.06■■■□□ 2.08
CDK9-201ENST00000373264 CCDC192P0DO97 292 aa28.06■■■□□ 2.08
CDK9-201ENST00000373264 LUZP1Q86V48 1076 aa28.06■■■□□ 2.08
CDK9-201ENST00000373264 PDIA4P13667 645 aaKnown RBP28.05■■■□□ 2.08
CDK9-201ENST00000373264 MYO5AQ9Y4I1 1855 aaKnown RBP28.05■■■□□ 2.08
CDK9-201ENST00000373264 FDPSP14324 419 aaKnown RBP28.04■■■□□ 2.08
CDK9-201ENST00000373264 GPAA1O43292 621 aa28.04■■■□□ 2.08
CDK9-201ENST00000373264 LLPHQ9BRT6 129 aaKnown RBP28.04■■■□□ 2.08
CDK9-201ENST00000373264 GJB4Q9NTQ9 266 aa28.04■■■□□ 2.08
CDK9-201ENST00000373264 SALL1Q9NSC2 1324 aa28.04■■■□□ 2.08
CDK9-201ENST00000373264 ILDR1Q86SU0 546 aaPredicted RBP28.03■■■□□ 2.08
CDK9-201ENST00000373264 SPEF2Q9C093 1822 aa28.03■■■□□ 2.08
CDK9-201ENST00000373264 VGLL2Q8N8G2 317 aa28.03■■■□□ 2.08
CDK9-201ENST00000373264 APPBP2Q92624 585 aa28.03■■■□□ 2.08
CDK9-201ENST00000373264 PIH1D3Q9NQM4 214 aaKnown RBP28.03■■■□□ 2.08
CDK9-201ENST00000373264 DISP2A7MBM2 1401 aa28.02■■■□□ 2.08
CDK9-201ENST00000373264 ANTXR2P58335 489 aa28.02■■■□□ 2.08
CDK9-201ENST00000373264 PDZRN4Q6ZMN7 1036 aaPredicted RBP28.02■■■□□ 2.08
CDK9-201ENST00000373264 USP28Q96RU2 1077 aa28.02■■■□□ 2.08
CDK9-201ENST00000373264 AKAP11Q9UKA4 1901 aa28.02■■■□□ 2.08
CDK9-201ENST00000373264 ANKRD18BA2A2Z9 1011 aa28.02■■■□□ 2.08
CDK9-201ENST00000373264 PHKA1P46020 1223 aa28.02■■■□□ 2.08
CDK9-201ENST00000373264 ANO6Q4KMQ2 910 aa28.02■■■□□ 2.08
CDK9-201ENST00000373264 SPC24Q8NBT2 197 aa28.02■■■□□ 2.08
CDK9-201ENST00000373264 CDHR2Q9BYE9 1310 aa28.02■■■□□ 2.08
CDK9-201ENST00000373264 DZIP3Q86Y13 1208 aaKnown RBP28.01■■■□□ 2.08
CDK9-201ENST00000373264 NBPF3Q9H094 633 aa28.01■■■□□ 2.08
CDK9-201ENST00000373264 FBXO3Q9UK99 471 aa28.01■■■□□ 2.08
CDK9-201ENST00000373264 A0A087WWV3 80 aa28.01■■■□□ 2.07
CDK9-201ENST00000373264 IMMTQ16891 758 aaKnown RBP28.01■■■□□ 2.07
CDK9-201ENST00000373264 CLSTN2Q9H4D0 955 aa28.01■■■□□ 2.07
CDK9-201ENST00000373264 SLIT2O94813 1529 aa28.01■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms